EY660466

Overview
NameEY660466
Unique NameEY660466
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length461
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660466 vs. ExPASy Swiss-Prot
Match: CATC_MOUSE (Dipeptidyl-peptidase 1 OS=Mus musculus GN=Ctsc PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.440e-14
Identity = 38/87 (43.68%), Postives = 52/87 (59.77%), Query Frame = 1
Query:    1 YEDFAHYKSGVYKHITG-------DVMGGHAVKLIGWGTSD-DGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLPSSK 237
            ++DF HY SG+Y H TG         +  HAV L+G+G     G +YWI+ N W  +WG  GYF+I+RG++EC IE   VA +P  K
Sbjct:  376 HDDFLHYHSGIYHH-TGLSDPFNPFELTNHAVLLVGYGRDPVTGIEYWIIKNSWGSNWGESGYFRIRRGTDECAIESIAVAAIPIPK 461          
BLAST of EY660466 vs. ExPASy Swiss-Prot
Match: CATC_RAT (Dipeptidyl-peptidase 1 OS=Rattus norvegicus GN=Ctsc PE=1 SV=3)

HSP 1 Score: 78.1814 bits (191), Expect = 1.880e-14
Identity = 38/87 (43.68%), Postives = 51/87 (58.62%), Query Frame = 1
Query:    1 YEDFAHYKSGVYKHITG-------DVMGGHAVKLIGWGTSD-DGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLPSSK 237
            ++DF HY SG+Y H TG         +  HAV L+G+G     G DYWI+ N W   WG  GYF+I+RG++EC IE   +A +P  K
Sbjct:  376 HDDFLHYHSGIYHH-TGLSDPFNPFELTNHAVLLVGYGKDPVTGLDYWIVKNSWGSQWGESGYFRIRRGTDECAIESIAMAAIPIPK 461          
BLAST of EY660466 vs. ExPASy Swiss-Prot
Match: CATC_SCHMA (Cathepsin C OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 4.631e-13
Identity = 34/78 (43.59%), Postives = 43/78 (55.13%), Query Frame = 1
Query:    1 YEDFAHYKSGVYKHITGDV---------MGGHAVKLIGWGTSD-DGEDYWILANQWNRSWGADGYFKIKRGSNECGIE 204
            YEDF  YK G+Y H T            +  HAV L+G+G     GE YW + N W   WG  GYF+I RG++ECG+E
Sbjct:  367 YEDFQFYKEGIYHHTTVQTDHYNFNPFELTNHAVLLVGYGVDKLSGEPYWKVKNSWGVEWGEQGYFRILRGTDECGVE 444          
BLAST of EY660466 vs. ExPASy Swiss-Prot
Match: YCF2E_CAEEL (Uncharacterized peptidase C1-like protein F26E4.3 OS=Caenorhabditis elegans GN=F26E4.3 PE=1 SV=3)

HSP 1 Score: 70.0922 bits (170), Expect = 5.121e-12
Identity = 33/83 (39.76%), Postives = 43/83 (51.81%), Query Frame = 1
Query:    1 YEDFAHYKSGVYKH--------ITGDVMGGHAVKLIGWGTSDDGED---YWILANQWNRSWGADGYFKIKRGSNECGIEEDVV 216
            +EDF  Y  GVY+H         +    G H+V+++GWG          YW+ AN W   WG DGYFK+ RG N C IE  V+
Sbjct:  344 HEDFFMYAGGVYQHSDLAAQKGASSVAEGYHSVRVLGWGVDHSTGKPIKYWLCANSWGTQWGEDGYFKVLRGENHCEIESFVI 426          
BLAST of EY660466 vs. ExPASy Swiss-Prot
Match: TINAL_HUMAN (Tubulointerstitial nephritis antigen-like OS=Homo sapiens GN=TINAGL1 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.946e-11
Identity = 36/84 (42.86%), Postives = 45/84 (53.57%), Query Frame = 1
Query:    1 YEDFAHYKSGVYKHITGDV--------MGGHAVKLIGWG--TSDDGED--YWILANQWNRSWGADGYFKIKRGSNECGIEEDVV 216
            +EDF  YK G+Y H    +         G H+VK+ GWG  T  DG    YW  AN W  +WG  G+F+I RG NEC IE  V+
Sbjct:  370 HEDFFLYKGGIYSHTPVSLGRPERYRRHGTHSVKITGWGEETLPDGRTLKYWTAANSWGPAWGERGHFRIVRGVNECDIESFVL 453          
BLAST of EY660466 vs. ExPASy Swiss-Prot
Match: CATV_GVXN (Viral cathepsin OS=Xestia c-nigrum granulosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.946e-11
Identity = 31/65 (47.69%), Postives = 39/65 (60.00%), Query Frame = 1
Query:    7 DFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGI 201
            D  +YKSGV KH + D    H V L+G+G  +D + YW L N W   WG  G+F+IKR  N CGI
Sbjct:  269 DLTNYKSGVAKHCSVDHGLNHGVLLVGYGQENDVK-YWTLKNSWGSDWGEQGFFRIKRDVNSCGI 332          
BLAST of EY660466 vs. ExPASy Swiss-Prot
Match: CPR2_ARATH (Probable cysteine proteinase At3g43960 OS=Arabidopsis thaliana GN=At3g43960 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 2.541e-11
Identity = 32/94 (34.04%), Postives = 49/94 (52.13%), Query Frame = 1
Query:    7 DFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNE----CGIEEDVVAGLPSSKNLVKEITSADMFE 276
            + + YKSGVYK    ++ G H V ++G+GTS D  DYW++ N W   WG  GY +++R  +E    C +   V    P   N    + S  +F+
Sbjct:  270 NMSDYKSGVYKGACSNLWGDHNVLIVGYGTSSDEGDYWLIRNSWGPEWGEGGYLRLQRNFHEPTGKCAVA--VAPVYPIKSNSSSHLLSPSVFK 361          
BLAST of EY660466 vs. ExPASy Swiss-Prot
Match: CATH_RAT (Cathepsin H OS=Rattus norvegicus GN=Ctsh PE=1 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 7.394e-11
Identity = 34/70 (48.57%), Postives = 43/70 (61.43%), Query Frame = 1
Query:    4 EDFAHYKSGVYK----HITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGI 201
            EDF  YKSGVY     H T D +  HAV  +G+G   +G  YWI+ N W  +WG +GYF I+RG N CG+
Sbjct:  255 EDFMMYKSGVYSSNSCHKTPDKVN-HAVLAVGYG-EQNGLLYWIVKNSWGSNWGNNGYFLIERGKNMCGL 322          
BLAST of EY660466 vs. ExPASy Swiss-Prot
Match: CATH_MOUSE (Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 7.394e-11
Identity = 34/70 (48.57%), Postives = 42/70 (60.00%), Query Frame = 1
Query:    4 EDFAHYKSGVYK----HITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGI 201
            EDF  YKSGVY     H T D +  HAV  +G+G   +G  YWI+ N W   WG +GYF I+RG N CG+
Sbjct:  255 EDFLMYKSGVYSSKSCHKTPDKVN-HAVLAVGYG-EQNGLLYWIVKNSWGSQWGENGYFLIERGKNMCGL 322          
The following BLAST results are available for this feature:
BLAST of EY660466 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
CATC_MOUSE1.440e-1443.68Dipeptidyl-peptidase 1 OS=Mus musculus GN=Ctsc PE=... [more]
CATC_RAT1.880e-1443.68Dipeptidyl-peptidase 1 OS=Rattus norvegicus GN=Cts... [more]
CATC_SCHMA4.631e-1343.59Cathepsin C OS=Schistosoma mansoni PE=2 SV=1[more]
YCF2E_CAEEL5.121e-1239.76Uncharacterized peptidase C1-like protein F26E4.3 ... [more]
TINAL_HUMAN1.946e-1142.86Tubulointerstitial nephritis antigen-like OS=Homo ... [more]
CATV_GVXN1.946e-1147.69Viral cathepsin OS=Xestia c-nigrum granulosis viru... [more]
CPR2_ARATH2.541e-1134.04Probable cysteine proteinase At3g43960 OS=Arabidop... [more]
CATH_RAT7.394e-1148.57Cathepsin H OS=Rattus norvegicus GN=Ctsh PE=1 SV=1[more]
CATH_MOUSE7.394e-1148.57Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-022-E07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660466 ID=EY660466; Name=EY660466; organism=Citrus sinensis; type=EST; length=461bp
TATGAGGATTTTGCTCACTACAAATCTGGGGTCTACAAACACATCACAGG
CGATGTAATGGGGGGTCATGCTGTTAAGCTTATTGGTTGGGGAACTAGTG
ATGATGGCGAGGATTACTGGATTCTCGCTAATCAGTGGAATAGAAGCTGG
GGTGCGGATGGTTACTTCAAGATTAAAAGAGGATCAAATGAGTGTGGTAT
TGAAGAGGATGTGGTTGCTGGTTTGCCTTCATCCAAAAATCTTGTCAAAG
AGATTACAAGTGCAGATATGTTTGAGGATGCTTCAGCTTGAGAGCAGACT
TTGCTATACCTTCATGTTGTTATTTATATATCAAATGTGTAGCTATAGGG
GTGTATCGTTGAACCTAAGCTATCAAGGCATGAAATGGGAAGCTCCCGTC
TTGCATAATTGAATGTATTAATGGAGTTTAATGTTGTGTGTAAAAATAGA
ACCAGTTGTAA
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