CV712730

Overview
NameCV712730
Unique NameCV712730
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length721
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_HAES1 (Phosphoserine aminotransferase OS=Haemophilus somnus (strain 129Pt) GN=serC PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.013e-47
Identity = 89/182 (48.90%), Postives = 132/182 (72.53%), Query Frame = -2
Query:  172 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 717
            S+ +D+++FGVIYAGAQKN+GP+G+T+VIVR+DL+G+A+ +TP + +Y+I  +N+S+ NTPP +  Y+C LVF+YLL  GG+ E+ K+NR+KA+LLY+ +D S+ FY   V    RS MNV FT    +L            +  LKGH+ +GGMRASIYNAMP+ G++ L+ FM+ F+A++
Sbjct:  177 SREIDISKFGVIYAGAQKNLGPAGITVVIVREDLIGHARKETPSIWNYEIQSKNSSMINTPPTFAWYLCSLVFKYLLAQGGIKEMAKLNREKAKLLYDFLDQSD-FYHNVVAPKNRSLMNVTFTTNNDELNAKFVAEATACGLQALKGHKVLGGMRASIYNAMPIEGIKALIEFMRKFEAEN 357          
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_JANMA (Phosphoserine aminotransferase OS=Janthinobacterium sp. (strain Marseille) GN=serC PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 2.628e-47
Identity = 95/182 (52.20%), Postives = 130/182 (71.43%), Query Frame = -2
Query:  172 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 717
            S+ +D++++ VIYAGAQKN+GP+GVTIVIVR D+LG+A    P   D+K+ DE++S++NTPP Y IY+ GL F+++L  GG+  +E++N  KA+L+Y+ +D S  FY   V  + RS MNVPF L+   L            +VQLKGH SVGGMRASIYNAMP+ GV+ LVAFMKDF+ K+
Sbjct:  182 SREIDISKYAVIYAGAQKNIGPAGVTIVIVRDDMLGHALPICPSAFDWKLVDEHDSMFNTPPTYPIYIAGLTFQWMLRQGGVAAMEQVNIAKAKLIYDYLD-STDFYVNSVPAANRSRMNVPFFLKDESLNGKFITEADAQGLVQLKGHSSVGGMRASIYNAMPIEGVQALVAFMKDFEKKY 362          
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_BURVG (Phosphoserine aminotransferase OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=serC PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 2.628e-47
Identity = 98/183 (53.55%), Postives = 126/183 (68.85%), Query Frame = -2
Query:  169 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKHA 717
            S+P+DV ++GV++ GAQKN+G +GVT+VIVR+DLL  A    P   ++K   ENNSLYNTPP Y IY+ GLVF++L   GGL  +E  N +KA+LLY+ ID S GFY   VE +VRS MNVPF L                 ++QLKGH+SVGGMRASIYNA+PL GV+ LV +MKDF+ + A
Sbjct:  179 SRPMDVAKYGVLFGGAQKNIGMAGVTVVIVREDLLDRALSICPSAFEWKTVAENNSLYNTPPTYAIYIAGLVFQWLKRQGGLAAIEARNIEKAKLLYDTIDAS-GFYLNKVEPAVRSRMNVPFFLADETRNEDFLAGAKARGLLQLKGHKSVGGMRASIYNAVPLEGVKALVEYMKDFERRDA 360          
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_RABIT (Phosphoserine aminotransferase OS=Oryctolagus cuniculus GN=PSAT1 PE=2 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 3.433e-47
Identity = 94/186 (50.54%), Postives = 129/186 (69.35%), Query Frame = -2
Query:  172 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTL--EKSD--LXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 717
            S+PVDV++FGVI+AGAQKNVG +GVT+VIVR DLLG A  + P +L+YK+   ++SLYNTPPC+ IY+ GLV E++   GG   ++K++  K++++Y +ID S GFY CPVE   RS MN+PF +   K D  L            M+ LKGHRSVGG+R S+YNA+ +  V+KL +FMK+F   H
Sbjct:  183 SRPVDVSKFGVIFAGAQKNVGAAGVTVVIVRDDLLGFALRECPSVLEYKVQATSSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMKKLSTIKSQMIYEIIDNSQGFYVCPVEPRNRSMMNIPFRIGNAKGDEALEKRFLDKALELHMISLKGHRSVGGVRVSLYNAVTIEDVQKLASFMKNFLEMH 368          
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_BACHK (Phosphoserine aminotransferase OS=Bacillus thuringiensis subsp. konkukian GN=serC PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 3.433e-47
Identity = 90/182 (49.45%), Postives = 129/182 (70.88%), Query Frame = -2
Query:  172 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 717
            S+  DV++FG+IYAGAQKN+GP+G+TI I+++DL+G A    P ML+Y+ + +NNSLYNTPP + IY+  +V E+L E GG++ +E+ N+ K+ LLYN +D S   +  PV+ + RS MN+PFT    +L            +V LKGHRSVGGMRASIYNAMP  GV++LV +MK+F+ ++
Sbjct:  179 SERYDVSKFGLIYAGAQKNLGPAGLTIAIIKRDLIGGADRYCPTMLNYETYSKNNSLYNTPPSFSIYVTKIVLEWLKEQGGVSAIEEQNKMKSSLLYNFLDESK-LFTSPVDPTYRSLMNIPFTTPSEELNNEFLQKAKERGLVTLKGHRSVGGMRASIYNAMPAHGVQQLVNYMKEFELEN 359          
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_VIBFM (Phosphoserine aminotransferase OS=Vibrio fischeri (strain MJ11) GN=serC PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 7.648e-47
Identity = 97/182 (53.30%), Postives = 125/182 (68.68%), Query Frame = -2
Query:  172 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 717
            S+ +DV+++GVIYAGAQKN+GP+G+TIVIVR DLL  A    P +L+Y +  +  S++NTPP Y  Y+ GLVF++L   GG++ +E  NRKKA +LY+ ID S+ FYR  V    RS MNVPF L  S+L            +  LKGHR VGGMRASIYNAMPL GVE LV FMK+F+ K+
Sbjct:  179 SRKIDVSKYGVIYAGAQKNIGPAGLTIVIVRDDLLDLASQALPSVLNYGVLADKESMFNTPPTYAWYLAGLVFKWLKSNGGIDAMETHNRKKAAVLYDYIDQSD-FYRNDVHSDNRSLMNVPFQLANSELDTKFLELADEAGLKALKGHRVVGGMRASIYNAMPLEGVEALVQFMKEFEEKY 359          
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_VESOH (Phosphoserine aminotransferase OS=Vesicomyosocius okutanii subsp. Calyptogena okutanii (strain HA) GN=serC PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 7.648e-47
Identity = 93/183 (50.82%), Postives = 129/183 (70.49%), Query Frame = -2
Query:  169 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKHA 717
            S+ VDV+++GVIYAGAQKN+G +G+T+VIVR+DL+G+     P++ DY I  +N+S+YNTP  Y  Y+   VFE+L + GGL+ + K+N+ KA+ LY+VIDGSN FY  PV    RS+MNVPF L   +L            ++ LKGHRSVGGMRASIYNAMP  G+ +L+ FMK F+ +++
Sbjct:  178 SREVDVSKYGVIYAGAQKNIGIAGLTVVIVREDLMGSVVANQPILFDYTIQAKNDSMYNTPSTYSWYVASRVFEWLKQQGGLSVIAKINQTKAKTLYDVIDGSN-FYSNPVALKYRSWMNVPFLLADENLNGLFVEKAAINNLITLKGHRSVGGMRASIYNAMPQKGINELINFMKVFEKENS 359          
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_LISMO (Phosphoserine aminotransferase OS=Listeria monocytogenes GN=serC PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 7.648e-47
Identity = 94/178 (52.81%), Postives = 123/178 (69.10%), Query Frame = -2
Query:  184 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDF 717
            S   DV +FG+IYAGAQKN+GP+G+T+VIVR+DL+G  +   P MLD+K+  EN+S+YNTPP + IY+  LVFE++ E GG+  +E +NRKKA LLY+ ID S+ F+  PVE S RS  NVPF    ++                LKGHRSVGGMRAS+YNA P+ GVE L+AFM+ F
Sbjct:  177 SSVYDVKKFGLIYAGAQKNIGPAGLTLVIVREDLIGQVEG-LPSMLDFKVQAENDSMYNTPPTFAIYVAKLVFEWIKEQGGVAGIEALNRKKAALLYDYIDQSD-FFSSPVEPSARSLTNVPFVTNSAEFDKAFVKEAEANGFENLKGHRSVGGMRASLYNAFPIEGVEALIAFMEKF 352          
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_BURM1 (Phosphoserine aminotransferase OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=serC PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 7.648e-47
Identity = 97/183 (53.01%), Postives = 126/183 (68.85%), Query Frame = -2
Query:  169 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKHA 717
            S+P+DV ++GV++ GAQKN+G +GVT+VIVR+DLL  A    P   ++K    NNSLYNTPP Y IY+ GLVF++L   GGL  +E  N +KA+LLY+ IDGS+ FY   VE +VRS MNVPF L                 ++QLKGH+SVGGMRASIYNA+PL GV+ LV +MKDF+ + A
Sbjct:  179 SRPMDVAKYGVLFGGAQKNIGMAGVTVVIVREDLLDRALSICPSAFEWKTVAANNSLYNTPPTYAIYIAGLVFQWLKRQGGLGAIEARNIEKAKLLYDTIDGSS-FYLNKVEPAVRSRMNVPFFLADESRNEDFLAGAKARGLLQLKGHKSVGGMRASIYNAVPLEGVKALVEYMKDFEQRCA 360          
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_LYSSC (Phosphoserine aminotransferase OS=Lysinibacillus sphaericus (strain C3-41) GN=serC PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 9.988e-47
Identity = 94/182 (51.65%), Postives = 117/182 (64.29%), Query Frame = -2
Query:  172 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 717
            SKP+D+ +FG+IYAGAQKN+GPSGVT+VI+RKDLL  A    P ML Y  H ++NSLYNTPP + IYM G V +++   GG+  VEK N  KA+++Y+ ID SNGFY+       RS MN+ F +   +L             V L GHRSVGG RAS YNA+PL   E L  FM DFQ KH
Sbjct:  180 SKPIDIQKFGLIYAGAQKNLGPSGVTVVIIRKDLLEKANKSIPTMLKYTTHADSNSLYNTPPTFGIYMLGEVLKWVESNGGVTAVEKRNELKAKVIYDAIDNSNGFYKGHATPESRSLMNITFRVADEELEKQFLAEAKAAGFVGLNGHRSVGGCRASTYNAVPLEACEALRDFMVDFQQKH 361          
The following BLAST results are available for this feature:
BLAST of CV712730 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 255
Match NameE-valueIdentityDescription
SERC_HAES12.013e-4748.90Phosphoserine aminotransferase OS=Haemophilus somn... [more]
SERC_JANMA2.628e-4752.20Phosphoserine aminotransferase OS=Janthinobacteriu... [more]
SERC_BURVG2.628e-4753.55Phosphoserine aminotransferase OS=Burkholderia vie... [more]
SERC_RABIT3.433e-4750.54Phosphoserine aminotransferase OS=Oryctolagus cuni... [more]
SERC_BACHK3.433e-4749.45Phosphoserine aminotransferase OS=Bacillus thuring... [more]
SERC_VIBFM7.648e-4753.30Phosphoserine aminotransferase OS=Vibrio fischeri ... [more]
SERC_VESOH7.648e-4750.82Phosphoserine aminotransferase OS=Vesicomyosocius ... [more]
SERC_LISMO7.648e-4752.81Phosphoserine aminotransferase OS=Listeria monocyt... [more]
SERC_BURM17.648e-4753.01Phosphoserine aminotransferase OS=Burkholderia mul... [more]
SERC_LYSSC9.988e-4751.65Phosphoserine aminotransferase OS=Lysinibacillus s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001N03_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001N03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712730 ID=CV712730; Name=CV712730; organism=Citrus sinensis; type=EST; length=721bp
TTTTTAGCCAGAAAAATACTCAACTACCATACCACGTTAAAAAGCAACAA
AAACATAAATAAGACAGACAAGAGAAAAACCAAAATCCTACATATTTTTC
TACTAAAAAAAAGGACTCTGGATTCAAGCCACAGCCAAAGCCAATCAACA
ACACTAAAGCAAAAATCAAGCATGCTTTGCCTGGAAATCCTTCATGAAAG
CAACCAACTTCTCAACGCCAGCCAAAGGCATAGCATTATATATTGAAGCC
CTCATTCCTCCAACTGACCTATGCCCCTTCAATTGCACCATCTTCTCCTT
AGCAGCTTCCTTCACAAACTCAGCTTCCAAATCAGACTTCTCCAGAGTAA
ACGGCACATTCATGAATGACCTCACAGATTTCTCAACTGGGCATCTATAG
AACCCGTTGCTTCCGTCAATGACGTTGTATAACAATTCAGCCTTCTTCCT
GTTCATCTTCTCAACTTCATTCAACCCACCCAATTCTAGCAAATACTCAA
AAACTAATCCACACATGTAGATACAATAACAAGGCGGTGTATTGTAAAGT
GAATTGTTTTCATCGTGAATCTTATAATCCAACATCAGAGGAGTCTTGTC
TTGAGCATTTCCAAGCAGATCCTTCCTAACAATCACGATTGTGACCCCAG
ATGGCCCCACGTTTTTCTGAGCTCCAGCATAAATTACACCAAACCTGGTA
ACATCAACAGGCTTTGAACAA
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