CV712730

Overview
NameCV712730
Unique NameCV712730
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length721
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_ECO8A (Phosphoserine aminotransferase OS=Escherichia coli O8 (strain IAI1) GN=serC PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 3.317e-50
Identity = 102/182 (56.04%), Postives = 132/182 (72.53%), Query Frame = -2
Query:  172 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 717
            S+P+DV+R+GVIYAGAQKN+GP+G+TIVIVR+DLLG A    P +LDY I ++N S++NTPP +  Y+ GLVF++L   GG+ E++K+N++KAELLY VID S+ FYR  V K+ RS MNVPF L  S L            +  LKGHR VGGMRASIYNAMPL GV+ L  FM +F+ +H
Sbjct:  181 SRPIDVSRYGVIYAGAQKNIGPAGLTIVIVREDLLGKANIACPSILDYSILNDNGSMFNTPPTFAWYLSGLVFKWLKANGGVAEMDKINQQKAELLYGVIDNSD-FYRNDVAKANRSRMNVPFQLADSALDKLFLEESFAAGLHALKGHRVVGGMRASIYNAMPLEGVKALTDFMVEFERRH 361          
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_ECO5E (Phosphoserine aminotransferase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=serC PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 3.317e-50
Identity = 102/182 (56.04%), Postives = 132/182 (72.53%), Query Frame = -2
Query:  172 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 717
            S+P+DV+R+GVIYAGAQKN+GP+G+TIVIVR+DLLG A    P +LDY I ++N S++NTPP +  Y+ GLVF++L   GG+ E++K+N++KAELLY VID S+ FYR  V K+ RS MNVPF L  S L            +  LKGHR VGGMRASIYNAMPL GV+ L  FM +F+ +H
Sbjct:  181 SRPIDVSRYGVIYAGAQKNIGPAGLTIVIVREDLLGKANVACPSILDYSILNDNGSMFNTPPTFAWYLSGLVFKWLKANGGVAEMDKINQQKAELLYGVIDNSD-FYRNDVAKANRSRMNVPFQLADSALDKLFLEESFAAGLHALKGHRVVGGMRASIYNAMPLEGVKALTDFMVEFERRH 361          
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_ECO57 (Phosphoserine aminotransferase OS=Escherichia coli O157:H7 GN=serC PE=3 SV=3)

HSP 1 Score: 198.364 bits (503), Expect = 3.317e-50
Identity = 102/182 (56.04%), Postives = 132/182 (72.53%), Query Frame = -2
Query:  172 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 717
            S+P+DV+R+GVIYAGAQKN+GP+G+TIVIVR+DLLG A    P +LDY I ++N S++NTPP +  Y+ GLVF++L   GG+ E++K+N++KAELLY VID S+ FYR  V K+ RS MNVPF L  S L            +  LKGHR VGGMRASIYNAMPL GV+ L  FM +F+ +H
Sbjct:  181 SRPIDVSRYGVIYAGAQKNIGPAGLTIVIVREDLLGKANVACPSILDYSILNDNGSMFNTPPTFAWYLSGLVFKWLKANGGVAEMDKINQQKAELLYGVIDNSD-FYRNDVAKANRSRMNVPFQLADSALDKLFLEESFAAGLHALKGHRVVGGMRASIYNAMPLEGVKALTDFMVEFERRH 361          
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_ECO55 (Phosphoserine aminotransferase OS=Escherichia coli (strain 55989 / EAEC) GN=serC PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 3.317e-50
Identity = 102/182 (56.04%), Postives = 132/182 (72.53%), Query Frame = -2
Query:  172 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 717
            S+P+DV+R+GVIYAGAQKN+GP+G+TIVIVR+DLLG A    P +LDY I ++N S++NTPP +  Y+ GLVF++L   GG+ E++K+N++KAELLY VID S+ FYR  V K+ RS MNVPF L  S L            +  LKGHR VGGMRASIYNAMPL GV+ L  FM +F+ +H
Sbjct:  181 SRPIDVSRYGVIYAGAQKNIGPAGLTIVIVREDLLGKANIACPSILDYSILNDNGSMFNTPPTFAWYLSGLVFKWLKANGGVAEMDKINQQKAELLYGVIDNSD-FYRNDVAKANRSRMNVPFQLADSALDKLFLEESFAAGLHALKGHRVVGGMRASIYNAMPLEGVKALTDFMVEFERRH 361          
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_ECO24 (Phosphoserine aminotransferase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=serC PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 3.317e-50
Identity = 102/182 (56.04%), Postives = 132/182 (72.53%), Query Frame = -2
Query:  172 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 717
            S+P+DV+R+GVIYAGAQKN+GP+G+TIVIVR+DLLG A    P +LDY I ++N S++NTPP +  Y+ GLVF++L   GG+ E++K+N++KAELLY VID S+ FYR  V K+ RS MNVPF L  S L            +  LKGHR VGGMRASIYNAMPL GV+ L  FM +F+ +H
Sbjct:  181 SRPIDVSRYGVIYAGAQKNIGPAGLTIVIVREDLLGKANIACPSILDYSILNDNGSMFNTPPTFAWYLSGLVFKWLRANGGVAEMDKINQQKAELLYGVIDNSD-FYRNDVAKANRSRMNVPFQLADSALDKLFLEESFAAGLHALKGHRVVGGMRASIYNAMPLEGVKALTDFMVEFERRH 361          
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_ECOLU (Phosphoserine aminotransferase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=serC PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 4.333e-50
Identity = 102/182 (56.04%), Postives = 132/182 (72.53%), Query Frame = -2
Query:  172 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 717
            S+P+DV+R+GVIYAGAQKN+GP+G+TIVIVR+DLLG A    P +LDY I ++N S++NTPP +  Y+ GLVF++L   GG+ E++K+N++KAELLY VID S+ FYR  V K+ RS MNVPF L  S L            +  LKGHR VGGMRASIYNAMPL GV+ L  FM +F+ +H
Sbjct:  181 SRPIDVSRYGVIYAGAQKNIGPAGLTIVIVREDLLGKANIACPSILDYSILNDNGSMFNTPPTFAWYLSGLVFKWLKANGGVAEMDKINQQKAELLYGVIDNSD-FYRNDVAKANRSRMNVPFQLADSALDKLFLEESFAAGLHALKGHRVVGGMRASIYNAMPLEGVKALTDFMIEFERRH 361          
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_AZOVD (Phosphoserine aminotransferase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=serC PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 4.333e-50
Identity = 99/182 (54.40%), Postives = 127/182 (69.78%), Query Frame = -2
Query:  172 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 717
            S+P+DV+RFG+IYAGAQKN+GPSG+ +VIVR+DLLG A+   P MLDYK+  +N S+YNTP  +  Y+ GLVFE+L E GG+  + + NR K +LLY  IDGS GFY  P+    RS+MNVPF L    L            ++ LKGHRSVGGMRASIYNA+ L  VE LVA+M +F+ +H
Sbjct:  180 SRPIDVSRFGLIYAGAQKNIGPSGLVVVIVREDLLGRARSVCPTMLDYKVAADNGSMYNTPATFSWYLSGLVFEWLKEQGGVEAMAQRNRAKKDLLYGFIDGS-GFYTNPIAVDARSWMNVPFRLADEKLDKPFLAGAEERGLLNLKGHRSVGGMRASIYNAVGLDAVEALVAYMAEFEKEH 360          
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_YERPP (Phosphoserine aminotransferase OS=Yersinia pestis (strain Pestoides F) GN=serC PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 5.658e-50
Identity = 98/182 (53.85%), Postives = 129/182 (70.88%), Query Frame = -2
Query:  172 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 717
            S+P+D++R+GVIYAGAQKN+GP+G+T+VIVR+DLLG A    P +LDYK+  +N+S++NTPP +  Y+ GLVF++L E GGL E+EK N+ KAELLY  ID   GFYR  V  + RS+MNVPF +  + L            +  LKGHR  GGMRASIYNAMP+ GV+ L  FM DF+ +H
Sbjct:  180 SRPIDISRYGVIYAGAQKNIGPAGLTLVIVREDLLGKAHTALPSILDYKVLADNDSMFNTPPTFAWYLSGLVFKWLKEQGGLCEMEKRNQAKAELLYGAID-RTGFYRNQVAITNRSWMNVPFQMADASLDKLFLREAEAQGLQALKGHRVAGGMRASIYNAMPIEGVKALTDFMADFERRH 360          
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_SERP5 (Phosphoserine aminotransferase OS=Serratia proteamaculans (strain 568) GN=serC PE=3 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 7.390e-50
Identity = 103/182 (56.59%), Postives = 130/182 (71.43%), Query Frame = -2
Query:  172 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 717
            S P+DV+RFGVIYAGAQKN+GP+G+T+VIVR+DLLG A+ + P +LDY +  EN+S++NTPP +  Y+ GLVF++L E GGL E+ K N+ KAELLY  ID S+ FYR  V  + RS+MNVPF L    L            +  LKGHR VGGMRASIYNAMPLAGV+ L  FM DF+ +H
Sbjct:  180 SGPLDVSRFGVIYAGAQKNIGPAGLTLVIVREDLLGKARREVPSILDYTVLAENDSMFNTPPTFAWYLSGLVFKWLKEQGGLVEMHKRNQAKAELLYATIDKSD-FYRSRVALANRSWMNVPFQLADPALDKVFLSEAEAIGLQALKGHRVVGGMRASIYNAMPLAGVKTLTDFMVDFERRH 360          
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_PHOPR (Phosphoserine aminotransferase OS=Photobacterium profundum GN=serC PE=3 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 7.390e-50
Identity = 99/183 (54.10%), Postives = 129/183 (70.49%), Query Frame = -2
Query:  169 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKHA 717
            S+P+DV+++GVIYAGAQKN+GP+G+TIVIVR DLLG A+ + P + DY +  +  S++NTPP +  Y+ G VF++L ELGGL  +++ N  KAELLYN IDGSN FY   V    RSFMN PF L+K +L            +  LKGHR VGGMRASIYNAMP+ GV+ LV FM+ F+ K+A
Sbjct:  179 SRPIDVSKYGVIYAGAQKNIGPAGLTIVIVRDDLLGKAKQEIPSIFDYTVLVDKESMFNTPPTFAWYLAGEVFKWLKELGGLEAMKQRNDAKAELLYNFIDGSN-FYNNDVHVDNRSFMNAPFQLKKPELDSKFLEQADAAGLKALKGHRVVGGMRASIYNAMPIEGVQALVDFMRQFEQKNA 360          
The following BLAST results are available for this feature:
BLAST of CV712730 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 255
Match NameE-valueIdentityDescription
SERC_ECO8A3.317e-5056.04Phosphoserine aminotransferase OS=Escherichia coli... [more]
SERC_ECO5E3.317e-5056.04Phosphoserine aminotransferase OS=Escherichia coli... [more]
SERC_ECO573.317e-5056.04Phosphoserine aminotransferase OS=Escherichia coli... [more]
SERC_ECO553.317e-5056.04Phosphoserine aminotransferase OS=Escherichia coli... [more]
SERC_ECO243.317e-5056.04Phosphoserine aminotransferase OS=Escherichia coli... [more]
SERC_ECOLU4.333e-5056.04Phosphoserine aminotransferase OS=Escherichia coli... [more]
SERC_AZOVD4.333e-5054.40Phosphoserine aminotransferase OS=Azotobacter vine... [more]
SERC_YERPP5.658e-5053.85Phosphoserine aminotransferase OS=Yersinia pestis ... [more]
SERC_SERP57.390e-5056.59Phosphoserine aminotransferase OS=Serratia proteam... [more]
SERC_PHOPR7.390e-5054.10Phosphoserine aminotransferase OS=Photobacterium p... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001N03_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001N03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712730 ID=CV712730; Name=CV712730; organism=Citrus sinensis; type=EST; length=721bp
TTTTTAGCCAGAAAAATACTCAACTACCATACCACGTTAAAAAGCAACAA
AAACATAAATAAGACAGACAAGAGAAAAACCAAAATCCTACATATTTTTC
TACTAAAAAAAAGGACTCTGGATTCAAGCCACAGCCAAAGCCAATCAACA
ACACTAAAGCAAAAATCAAGCATGCTTTGCCTGGAAATCCTTCATGAAAG
CAACCAACTTCTCAACGCCAGCCAAAGGCATAGCATTATATATTGAAGCC
CTCATTCCTCCAACTGACCTATGCCCCTTCAATTGCACCATCTTCTCCTT
AGCAGCTTCCTTCACAAACTCAGCTTCCAAATCAGACTTCTCCAGAGTAA
ACGGCACATTCATGAATGACCTCACAGATTTCTCAACTGGGCATCTATAG
AACCCGTTGCTTCCGTCAATGACGTTGTATAACAATTCAGCCTTCTTCCT
GTTCATCTTCTCAACTTCATTCAACCCACCCAATTCTAGCAAATACTCAA
AAACTAATCCACACATGTAGATACAATAACAAGGCGGTGTATTGTAAAGT
GAATTGTTTTCATCGTGAATCTTATAATCCAACATCAGAGGAGTCTTGTC
TTGAGCATTTCCAAGCAGATCCTTCCTAACAATCACGATTGTGACCCCAG
ATGGCCCCACGTTTTTCTGAGCTCCAGCATAAATTACACCAAACCTGGTA
ACATCAACAGGCTTTGAACAA
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