CV712730

Overview
NameCV712730
Unique NameCV712730
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length721
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_PSEAE (Phosphoserine aminotransferase OS=Pseudomonas aeruginosa GN=serC PE=3 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 9.652e-50
Identity = 99/182 (54.40%), Postives = 128/182 (70.33%), Query Frame = -2
Query:  172 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 717
            S+P+DV+RFG+IYAGAQKN+GPSG+ +VIVR+DLLG A+   P ML+YK   +N S+YNTP  Y  Y+ GLVFE+L E GG+  +E+ NR K +LLY  ID S+ FY  P++ S RS+MNVPF L    L            ++ LKGHRSVGGMRASIYNA+ L  VE LVA+M +F+ +H
Sbjct:  180 SRPLDVSRFGLIYAGAQKNIGPSGLVVVIVREDLLGRARSVCPTMLNYKTAADNGSMYNTPATYSWYLSGLVFEWLKEQGGVTAMEQRNRAKKDLLYKTIDASD-FYTNPIQPSARSWMNVPFRLADERLDKPFLEGAEARGLLNLKGHRSVGGMRASIYNALGLDAVEALVAYMAEFEKEH 360          
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_KLEP7 (Phosphoserine aminotransferase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=serC PE=3 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 9.652e-50
Identity = 101/182 (55.49%), Postives = 130/182 (71.43%), Query Frame = -2
Query:  172 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 717
            S+ +DV RFGVIYAGAQKN+GP+G+T+VIVR+DLLG A    P +LDY +  EN+S++NTPP +  Y+ GLVF++L + GG+  ++K+N++KAELLY VID S GFYR  V ++ RS MNVPF L  S L            +  LKGHR VGGMRASIYNAMPL GV+ L  FM DF+ +H
Sbjct:  181 SREIDVNRFGVIYAGAQKNIGPAGLTLVIVREDLLGKASVACPSILDYTVLSENDSMFNTPPTFAWYLAGLVFKWLKQQGGVAAMDKINQQKAELLYGVIDNS-GFYRNDVAQANRSRMNVPFQLADSALDKLFLEESFAAGLHALKGHRVVGGMRASIYNAMPLDGVKTLTDFMLDFERRH 361          
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_KLEP3 (Phosphoserine aminotransferase OS=Klebsiella pneumoniae (strain 342) GN=serC PE=3 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 9.652e-50
Identity = 101/182 (55.49%), Postives = 130/182 (71.43%), Query Frame = -2
Query:  172 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 717
            S+ +DV RFGVIYAGAQKN+GP+G+T+VIVR+DLLG A    P +LDY +  EN+S++NTPP +  Y+ GLVF++L + GG+  ++K+N++KAELLY VID S GFYR  V ++ RS MNVPF L  S L            +  LKGHR VGGMRASIYNAMPL GV+ L  FM DF+ +H
Sbjct:  181 SREIDVNRFGVIYAGAQKNIGPAGLTLVIVREDLLGKASVACPSILDYTVLSENDSMFNTPPTFAWYLAGLVFKWLKQQGGVAAMDKINQQKAELLYGVIDNS-GFYRNDVAQANRSRMNVPFQLADSALDKLFLEESFAAGLHALKGHRVVGGMRASIYNAMPLDGVKALTDFMLDFERRH 361          
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_PSEA7 (Phosphoserine aminotransferase OS=Pseudomonas aeruginosa (strain PA7) GN=serC PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.261e-49
Identity = 99/179 (55.31%), Postives = 127/179 (70.95%), Query Frame = -2
Query:  181 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQ 717
            S+P+DV+RFG+IYAGAQKN+GPSG+ +VIVR+DLLG A+   P ML+YKI  +N S+YNTP  Y  Y+ GLVFE+L E GG+  +E+ NR K +LLY  ID S+ FY  P++ S RS+MNVPF L    L            ++ LKGHRSVGGMRASIYNA+ L  VE LVA+M +F+
Sbjct:  180 SRPLDVSRFGLIYAGAQKNIGPSGLVVVIVREDLLGRARSACPTMLNYKIAADNGSMYNTPATYSWYLSGLVFEWLKEQGGVTAMERRNRAKKDLLYKTIDASD-FYTNPIQPSARSWMNVPFRLADERLDKPFLEGAEARGLLNLKGHRSVGGMRASIYNALGLDAVEALVAYMAEFE 357          
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_HAHCH (Phosphoserine aminotransferase OS=Hahella chejuensis (strain KCTC 2396) GN=serC PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.261e-49
Identity = 96/183 (52.46%), Postives = 132/183 (72.13%), Query Frame = -2
Query:  169 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKHA 717
            S+PVD++RFGVIYAGAQKN+GP+G+T+VIVR+DLLG A D  P ML+YK+  EN+S+ NTPP +  Y+ GLVF++L   GG+  +E +N +KA+ LY+ ID S  FY  P++ S RS+MNVPFTL+   L            ++ L+GHRSVGGMRAS+YNA+P   V+ L+ FM+DF  ++A
Sbjct:  180 SRPVDISRFGVIYAGAQKNIGPAGLTLVIVREDLLGYASDSLPTMLNYKVASENDSMVNTPPTFSWYLAGLVFKWLKGKGGVQAMEAINCRKADKLYSYIDDSE-FYANPIDLSCRSWMNVPFTLKDDRLDQKFLQEAEGAGLLNLQGHRSVGGMRASLYNALPEEAVDALIGFMQDFAGRNA 361          
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_ERWCT (Phosphoserine aminotransferase OS=Erwinia carotovora subsp. atroseptica GN=serC PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.261e-49
Identity = 100/182 (54.95%), Postives = 132/182 (72.53%), Query Frame = -2
Query:  172 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 717
            S+ +DV+R+GVIYAGAQKN+GP+G+T+VIVR+DLLG A+ + P +LDY++  +N+S++NTPP +  Y+ G+VF++L E GGL E+EK N++KA+LLY+ IDG N FYR  V  + RS MNVPF L  S L            +  LKGHR VGGMRASIYNAMPL GV+ L  FM DF  +H
Sbjct:  180 SRRIDVSRYGVIYAGAQKNIGPAGLTLVIVREDLLGKARRELPSILDYQVLADNDSMFNTPPTFAWYLSGMVFKWLKEHGGLAEMEKRNQEKADLLYSAIDG-NDFYRNDVALANRSRMNVPFLLADSALDKVFLEESVAAGLHALKGHRVVGGMRASIYNAMPLEGVKALTEFMADFARRH 360          
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_ECOUT (Phosphoserine aminotransferase OS=Escherichia coli (strain UTI89 / UPEC) GN=serC PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.261e-49
Identity = 101/182 (55.49%), Postives = 132/182 (72.53%), Query Frame = -2
Query:  172 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 717
            S+P+DV+R+GVIYAGAQKN+GP+G+TIVIVR+DLLG A    P +LDY I ++N+S++NTPP +  Y+ GLVF++L   GG+  ++K+N++KAELLY VID S+ FYR  V K+ RS MNVPF L  S L            +  LKGHR VGGMRASIYNAMPL GV+ L  FM +F+ +H
Sbjct:  181 SRPIDVSRYGVIYAGAQKNIGPAGLTIVIVREDLLGKANIACPSILDYSILNDNDSMFNTPPTFAWYLSGLVFKWLKANGGVAAMDKINQQKAELLYGVIDNSD-FYRNDVAKANRSRMNVPFQLADSALDKLFLEESFAAGLHALKGHRVVGGMRASIYNAMPLEGVKALTDFMVEFERRH 361          
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_ECOL6 (Phosphoserine aminotransferase OS=Escherichia coli O6 GN=serC PE=3 SV=3)

HSP 1 Score: 196.438 bits (498), Expect = 1.261e-49
Identity = 101/182 (55.49%), Postives = 132/182 (72.53%), Query Frame = -2
Query:  172 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 717
            S+P+DV+R+GVIYAGAQKN+GP+G+TIVIVR+DLLG A    P +LDY I ++N+S++NTPP +  Y+ GLVF++L   GG+  ++K+N++KAELLY VID S+ FYR  V K+ RS MNVPF L  S L            +  LKGHR VGGMRASIYNAMPL GV+ L  FM +F+ +H
Sbjct:  181 SRPIDVSRYGVIYAGAQKNIGPAGLTIVIVREDLLGKANIACPSILDYSILNDNDSMFNTPPTFAWYLSGLVFKWLKANGGVAAMDKINQQKAELLYGVIDNSD-FYRNDVAKANRSRMNVPFQLADSALDKLFLEESFAAGLHALKGHRVVGGMRASIYNAMPLEGVKALTDFMVEFERRH 361          
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_ECOL5 (Phosphoserine aminotransferase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=serC PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.261e-49
Identity = 101/182 (55.49%), Postives = 132/182 (72.53%), Query Frame = -2
Query:  172 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 717
            S+P+DV+R+GVIYAGAQKN+GP+G+TIVIVR+DLLG A    P +LDY I ++N+S++NTPP +  Y+ GLVF++L   GG+  ++K+N++KAELLY VID S+ FYR  V K+ RS MNVPF L  S L            +  LKGHR VGGMRASIYNAMPL GV+ L  FM +F+ +H
Sbjct:  181 SRPIDVSRYGVIYAGAQKNIGPAGLTIVIVREDLLGKANIACPSILDYSILNDNDSMFNTPPTFAWYLSGLVFKWLKANGGVAAMDKINQQKAELLYGVIDNSD-FYRNDVAKANRSRMNVPFQLADSALDKLFLEESFAAGLHALKGHRVVGGMRASIYNAMPLEGVKALTDFMVEFERRH 361          
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_ECOK1 (Phosphoserine aminotransferase OS=Escherichia coli O1:K1 / APEC GN=serC PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.261e-49
Identity = 101/182 (55.49%), Postives = 132/182 (72.53%), Query Frame = -2
Query:  172 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 717
            S+P+DV+R+GVIYAGAQKN+GP+G+TIVIVR+DLLG A    P +LDY I ++N+S++NTPP +  Y+ GLVF++L   GG+  ++K+N++KAELLY VID S+ FYR  V K+ RS MNVPF L  S L            +  LKGHR VGGMRASIYNAMPL GV+ L  FM +F+ +H
Sbjct:  181 SRPIDVSRYGVIYAGAQKNIGPAGLTIVIVREDLLGKANIACPSILDYSILNDNDSMFNTPPTFAWYLSGLVFKWLKANGGVAAMDKINQQKAELLYGVIDNSD-FYRNDVAKANRSRMNVPFQLADSALDKLFLEESFAAGLHALKGHRVVGGMRASIYNAMPLEGVKALTDFMVEFERRH 361          
The following BLAST results are available for this feature:
BLAST of CV712730 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 255
Match NameE-valueIdentityDescription
SERC_PSEAE9.652e-5054.40Phosphoserine aminotransferase OS=Pseudomonas aeru... [more]
SERC_KLEP79.652e-5055.49Phosphoserine aminotransferase OS=Klebsiella pneum... [more]
SERC_KLEP39.652e-5055.49Phosphoserine aminotransferase OS=Klebsiella pneum... [more]
SERC_PSEA71.261e-4955.31Phosphoserine aminotransferase OS=Pseudomonas aeru... [more]
SERC_HAHCH1.261e-4952.46Phosphoserine aminotransferase OS=Hahella chejuens... [more]
SERC_ERWCT1.261e-4954.95Phosphoserine aminotransferase OS=Erwinia carotovo... [more]
SERC_ECOUT1.261e-4955.49Phosphoserine aminotransferase OS=Escherichia coli... [more]
SERC_ECOL61.261e-4955.49Phosphoserine aminotransferase OS=Escherichia coli... [more]
SERC_ECOL51.261e-4955.49Phosphoserine aminotransferase OS=Escherichia coli... [more]
SERC_ECOK11.261e-4955.49Phosphoserine aminotransferase OS=Escherichia coli... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001N03_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001N03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712730 ID=CV712730; Name=CV712730; organism=Citrus sinensis; type=EST; length=721bp
TTTTTAGCCAGAAAAATACTCAACTACCATACCACGTTAAAAAGCAACAA
AAACATAAATAAGACAGACAAGAGAAAAACCAAAATCCTACATATTTTTC
TACTAAAAAAAAGGACTCTGGATTCAAGCCACAGCCAAAGCCAATCAACA
ACACTAAAGCAAAAATCAAGCATGCTTTGCCTGGAAATCCTTCATGAAAG
CAACCAACTTCTCAACGCCAGCCAAAGGCATAGCATTATATATTGAAGCC
CTCATTCCTCCAACTGACCTATGCCCCTTCAATTGCACCATCTTCTCCTT
AGCAGCTTCCTTCACAAACTCAGCTTCCAAATCAGACTTCTCCAGAGTAA
ACGGCACATTCATGAATGACCTCACAGATTTCTCAACTGGGCATCTATAG
AACCCGTTGCTTCCGTCAATGACGTTGTATAACAATTCAGCCTTCTTCCT
GTTCATCTTCTCAACTTCATTCAACCCACCCAATTCTAGCAAATACTCAA
AAACTAATCCACACATGTAGATACAATAACAAGGCGGTGTATTGTAAAGT
GAATTGTTTTCATCGTGAATCTTATAATCCAACATCAGAGGAGTCTTGTC
TTGAGCATTTCCAAGCAGATCCTTCCTAACAATCACGATTGTGACCCCAG
ATGGCCCCACGTTTTTCTGAGCTCCAGCATAAATTACACCAAACCTGGTA
ACATCAACAGGCTTTGAACAA
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