CV712730

Overview
NameCV712730
Unique NameCV712730
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length721
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_ECO81 (Phosphoserine aminotransferase OS=Escherichia coli O81 (strain ED1a) GN=serC PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.261e-49
Identity = 101/182 (55.49%), Postives = 132/182 (72.53%), Query Frame = -2
Query:  172 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 717
            S+P+DV+R+GVIYAGAQKN+GP+G+TIVIVR+DLLG A    P +LDY I ++N+S++NTPP +  Y+ GLVF++L   GG+  ++K+N++KAELLY VID S+ FYR  V K+ RS MNVPF L  S L            +  LKGHR VGGMRASIYNAMPL GV+ L  FM +F+ +H
Sbjct:  181 SRPIDVSRYGVIYAGAQKNIGPAGLTIVIVREDLLGKANIACPSILDYSILNDNDSMFNTPPTFAWYLSGLVFKWLKANGGVAAMDKINQQKAELLYGVIDNSD-FYRNDVAKANRSRMNVPFQLADSALDKLFLEESFAAGLHALKGHRVVGGMRASIYNAMPLEGVKALTDFMVEFERRH 361          
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_ECO7I (Phosphoserine aminotransferase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=serC PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.261e-49
Identity = 101/182 (55.49%), Postives = 132/182 (72.53%), Query Frame = -2
Query:  172 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 717
            S+P+DV+R+GVIYAGAQKN+GP+G+TIVIVR+DLLG A    P +LDY I ++N+S++NTPP +  Y+ GLVF++L   GG+  ++K+N++KAELLY VID S+ FYR  V K+ RS MNVPF L  S L            +  LKGHR VGGMRASIYNAMPL GV+ L  FM +F+ +H
Sbjct:  181 SRPIDVSRYGVIYAGAQKNIGPAGLTIVIVREDLLGKANIACPSILDYSILNDNDSMFNTPPTFAWYLSGLVFKWLKANGGVAAMDKINQQKAELLYGVIDNSD-FYRNDVAKANRSRMNVPFQLADSALDKLFLEESFAAGLHALKGHRVVGGMRASIYNAMPLEGVKALTDFMVEFERRH 361          
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_ECO45 (Phosphoserine aminotransferase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=serC PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.261e-49
Identity = 101/182 (55.49%), Postives = 132/182 (72.53%), Query Frame = -2
Query:  172 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 717
            S+P+DV+R+GVIYAGAQKN+GP+G+TIVIVR+DLLG A    P +LDY I ++N+S++NTPP +  Y+ GLVF++L   GG+  ++K+N++KAELLY VID S+ FYR  V K+ RS MNVPF L  S L            +  LKGHR VGGMRASIYNAMPL GV+ L  FM +F+ +H
Sbjct:  181 SRPIDVSRYGVIYAGAQKNIGPAGLTIVIVREDLLGKANIACPSILDYSILNDNDSMFNTPPTFAWYLSGLVFKWLKANGGVAAMDKINQQKAELLYGVIDNSD-FYRNDVAKANRSRMNVPFQLADSALDKLFLEESFAAGLHALKGHRVVGGMRASIYNAMPLEGVKALTDFMVEFERRH 361          
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_MOUSE (Phosphoserine aminotransferase OS=Mus musculus GN=Psat1 PE=1 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.646e-49
Identity = 99/186 (53.23%), Postives = 130/186 (69.89%), Query Frame = -2
Query:  172 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTL--EKSD--LXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 717
            S+PVDV++FGVI+AGAQKNVG +GVT+VIVR DLLG +  + P +LDYK+   NNSLYNTPPC+ IY+ G+V E++   GG   +EK++  K++++Y +ID S GFY CPVE+  RS MN+PF +   K D  L            M+ LKGHRSVGG+RAS+YNA+    VEKL AFMK+F   H
Sbjct:  183 SRPVDVSKFGVIFAGAQKNVGSAGVTVVIVRDDLLGFSLRECPSVLDYKVQAGNNSLYNTPPCFSIYVMGMVLEWIKNNGGAAAMEKLSSIKSQMIYEIIDNSQGFYVCPVERQNRSRMNIPFRIGNAKGDEALEKRFLDKAVELNMISLKGHRSVGGIRASLYNAVTTEDVEKLAAFMKNFLEMH 368          
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_ECO27 (Phosphoserine aminotransferase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=serC PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.646e-49
Identity = 101/182 (55.49%), Postives = 132/182 (72.53%), Query Frame = -2
Query:  172 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 717
            S+P+DV+R+GVIYAGAQKN+GP+G+TIVIVR+DLLG A    P +LDY I ++N+S++NTPP +  Y+ GLVF++L   GG+  ++K+N++KAELLY VID S+ FYR  V K+ RS MNVPF L  S L            +  LKGHR VGGMRASIYNAMPL GV+ L  FM +F+ +H
Sbjct:  181 SRPIDVSRYGVIYAGAQKNIGPAGLTIVIVREDLLGKANIACPSILDYSILNDNDSMFNTPPTFAWYLSGLVFKWLKANGGVVAMDKINQQKAELLYGVIDNSD-FYRNDVAKANRSRMNVPFQLADSALDKLFLEESFAAGLHALKGHRVVGGMRASIYNAMPLEGVKALTDFMVEFERRH 361          
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_CITK8 (Phosphoserine aminotransferase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=serC PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.646e-49
Identity = 102/182 (56.04%), Postives = 130/182 (71.43%), Query Frame = -2
Query:  172 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 717
            S P+DV+R+GVIYAGAQKN+GP+G+TIVIVR+DLLG A    P +LDY + ++N+S++NTPP +  Y+ GLVF++L   GG+  + K+N++KAELLY VID S+ FYR  V KS RS MNVPF L  S L            +  LKGHR VGGMRASIYNAMPL GV+ L  FM DF+ +H
Sbjct:  181 SAPLDVSRYGVIYAGAQKNIGPAGLTIVIVREDLLGKANIACPSILDYTVLNDNDSMFNTPPTFAWYLSGLVFKWLKAQGGVAAMNKINQQKAELLYGVIDNSD-FYRNDVAKSNRSRMNVPFQLADSALDKVFLEESFAAGLHALKGHRVVGGMRASIYNAMPLEGVKALTDFMVDFERRH 361          
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_CHRVO (Phosphoserine aminotransferase OS=Chromobacterium violaceum GN=serC PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.646e-49
Identity = 96/182 (52.75%), Postives = 129/182 (70.88%), Query Frame = -2
Query:  172 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 717
            S+ VDV+RFG+IYAGAQKN+GPSG+T++++R+DLLG A+   P ML+Y++H + +S+YNTP  Y IY+ GLVF++L E GG+  +   N +KA LLY+VID S GFY   +E+  RS MNV F L    L            + QLKGHR+VGGMRASIYNAMP+ GV+ LV FM+DF  ++
Sbjct:  180 SREVDVSRFGMIYAGAQKNIGPSGLTVLLIREDLLGKARADIPTMLNYQVHADADSMYNTPGTYPIYIAGLVFKWLKEQGGVKGIATRNEEKAGLLYHVIDSSGGFYSTHIEQPFRSKMNVVFKLRDEALDEIFLLEARKNGLAQLKGHRAVGGMRASIYNAMPIEGVKSLVNFMQDFARQY 361          
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_ERWT9 (Phosphoserine aminotransferase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=serC PE=3 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.150e-49
Identity = 98/182 (53.85%), Postives = 132/182 (72.53%), Query Frame = -2
Query:  172 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 717
            S P+DV+R+GV+YAGAQKN+GP+G+T+V+VR+DLLG+A+ + P +LDY +  EN+S++NTPP +  Y+ GLVF++L E GG+ E++K N+ KA+LLY  ID S+ FYR  V  + RS MNVPF L  + L            +  LKGHR VGGMRASIYNAMPLAGV+ L  FM DF+ +H
Sbjct:  180 STPIDVSRYGVLYAGAQKNIGPAGLTLVVVREDLLGHARKELPSILDYTVLAENDSMFNTPPTFAWYLSGLVFKWLKEQGGVGELDKRNQAKADLLYGTIDSSD-FYRNDVAVANRSRMNVPFQLADAALDKLFLEESFAAGLHALKGHRVVGGMRASIYNAMPLAGVKTLTDFMIDFERRH 360          
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_PROMH (Phosphoserine aminotransferase OS=Proteus mirabilis (strain HI4320) GN=serC PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.808e-49
Identity = 97/183 (53.01%), Postives = 129/183 (70.49%), Query Frame = -2
Query:  169 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKHA 717
            S+P+DV+RFG+IYAGAQKN+GP+G+T+VI+R+DLLG A+ +TP + DY +  EN+S++NTPP +  Y+ G+VF++L E GGL E+ K N +KA LLY+ ID S+ FY   +    RS MNVPF +    L            +V LKGHR  GGMRASIYNAMP AGV+ LV FM DF+ +HA
Sbjct:  181 SQPLDVSRFGMIYAGAQKNIGPAGLTLVIIREDLLGKARKETPSVFDYTVLAENDSMFNTPPTFAWYLSGMVFKWLKEQGGLQEIAKRNYEKATLLYSAIDNSD-FYINRIATENRSLMNVPFQMSSPALDAVFLKEAEEQGLVALKGHRVSGGMRASIYNAMPFAGVQALVDFMADFERRHA 362          
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_YERE8 (Phosphoserine aminotransferase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=serC PE=3 SV=2)

HSP 1 Score: 194.897 bits (494), Expect = 3.668e-49
Identity = 97/182 (53.30%), Postives = 130/182 (71.43%), Query Frame = -2
Query:  172 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 717
            S+P+DV+R+GVIYAGAQKN+GP+G+T+VIVR+DLLG A+ + P +LDYK+  EN+S++NTPP +  Y+ GLVF++L E GGL E+ K N+ KAELLY  ID ++ FYR  V  + RS+MNVPF +    L            +  LKGHR  GGMRASIYNAMP+ GV+ L  FM +F+ +H
Sbjct:  180 SRPIDVSRYGVIYAGAQKNIGPAGLTVVIVREDLLGKARTELPSILDYKVLAENDSMFNTPPTFAWYLSGLVFKWLKEQGGLGEMGKRNQAKAELLYGAIDRTD-FYRNQVATANRSWMNVPFQMIDPSLDKLFLSEAEAQGLQALKGHRVAGGMRASIYNAMPIEGVKALTDFMAEFERRH 360          
The following BLAST results are available for this feature:
BLAST of CV712730 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 255
Match NameE-valueIdentityDescription
SERC_ECO811.261e-4955.49Phosphoserine aminotransferase OS=Escherichia coli... [more]
SERC_ECO7I1.261e-4955.49Phosphoserine aminotransferase OS=Escherichia coli... [more]
SERC_ECO451.261e-4955.49Phosphoserine aminotransferase OS=Escherichia coli... [more]
SERC_MOUSE1.646e-4953.23Phosphoserine aminotransferase OS=Mus musculus GN=... [more]
SERC_ECO271.646e-4955.49Phosphoserine aminotransferase OS=Escherichia coli... [more]
SERC_CITK81.646e-4956.04Phosphoserine aminotransferase OS=Citrobacter kose... [more]
SERC_CHRVO1.646e-4952.75Phosphoserine aminotransferase OS=Chromobacterium ... [more]
SERC_ERWT92.150e-4953.85Phosphoserine aminotransferase OS=Erwinia tasmanie... [more]
SERC_PROMH2.808e-4953.01Phosphoserine aminotransferase OS=Proteus mirabili... [more]
SERC_YERE83.668e-4953.30Phosphoserine aminotransferase OS=Yersinia enteroc... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001N03_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001N03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712730 ID=CV712730; Name=CV712730; organism=Citrus sinensis; type=EST; length=721bp
TTTTTAGCCAGAAAAATACTCAACTACCATACCACGTTAAAAAGCAACAA
AAACATAAATAAGACAGACAAGAGAAAAACCAAAATCCTACATATTTTTC
TACTAAAAAAAAGGACTCTGGATTCAAGCCACAGCCAAAGCCAATCAACA
ACACTAAAGCAAAAATCAAGCATGCTTTGCCTGGAAATCCTTCATGAAAG
CAACCAACTTCTCAACGCCAGCCAAAGGCATAGCATTATATATTGAAGCC
CTCATTCCTCCAACTGACCTATGCCCCTTCAATTGCACCATCTTCTCCTT
AGCAGCTTCCTTCACAAACTCAGCTTCCAAATCAGACTTCTCCAGAGTAA
ACGGCACATTCATGAATGACCTCACAGATTTCTCAACTGGGCATCTATAG
AACCCGTTGCTTCCGTCAATGACGTTGTATAACAATTCAGCCTTCTTCCT
GTTCATCTTCTCAACTTCATTCAACCCACCCAATTCTAGCAAATACTCAA
AAACTAATCCACACATGTAGATACAATAACAAGGCGGTGTATTGTAAAGT
GAATTGTTTTCATCGTGAATCTTATAATCCAACATCAGAGGAGTCTTGTC
TTGAGCATTTCCAAGCAGATCCTTCCTAACAATCACGATTGTGACCCCAG
ATGGCCCCACGTTTTTCTGAGCTCCAGCATAAATTACACCAAACCTGGTA
ACATCAACAGGCTTTGAACAA
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