CV712730

Overview
NameCV712730
Unique NameCV712730
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length721
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_PSEE4 (Phosphoserine aminotransferase OS=Pseudomonas entomophila (strain L48) GN=serC PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.668e-49
Identity = 96/183 (52.46%), Postives = 126/183 (68.85%), Query Frame = -2
Query:  169 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKHA 717
            S+P+DV+++G+IYAGAQKN+GPSG+ +VIVR+DLLG A+   P MLDYK+  +N S+YNTP  Y  Y+ GLVFE+L E GG+  +E+ NR K + LY  ID S  FY  P+  + RS+MNVPF L    L            ++ LKGHRSVGGMRASIYNA+ L  VE LV +M +F+ +HA
Sbjct:  180 SRPIDVSQYGLIYAGAQKNIGPSGLVVVIVREDLLGRARSSCPTMLDYKVSADNGSMYNTPATYSWYLSGLVFEWLKEQGGVEAMEQRNRAKKDRLYGFIDSSE-FYTNPISHNARSWMNVPFRLADERLDKAFLAGADARGLLNLKGHRSVGGMRASIYNALGLEAVEALVGYMAEFEKEHA 361          
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_PECCP (Phosphoserine aminotransferase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=serC PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.668e-49
Identity = 100/182 (54.95%), Postives = 131/182 (71.98%), Query Frame = -2
Query:  172 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 717
            S+ +DV+R+GVIYAGAQKN+GP+G+T+VIVR DLLG A+ + P +LDY+I  +N+S++NTPP +  Y+ G+VF++L E GGL E+EK N++KA+LLY+ IDG N FYR  V  + RS MNVPF L  + L            +  LKGHR VGGMRASIYNAMPL GV+ L  FM DF  +H
Sbjct:  180 SRRIDVSRYGVIYAGAQKNIGPAGLTLVIVRDDLLGKARRELPSILDYQILADNDSMFNTPPTFAWYLSGMVFKWLKEHGGLAEMEKRNQEKADLLYSAIDG-NDFYRNDVAVANRSRMNVPFLLADAALDKVFLEESVAAGLHALKGHRVVGGMRASIYNAMPLEGVKALTEFMADFARRH 360          
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_LEPIN (Phosphoserine aminotransferase OS=Leptospira interrogans GN=serC PE=3 SV=2)

HSP 1 Score: 194.897 bits (494), Expect = 3.668e-49
Identity = 97/181 (53.59%), Postives = 130/181 (71.82%), Query Frame = -2
Query:  175 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK 717
            S+ +DV  FGVI+AGAQKN+GPSG+++ I+R DLLG +  K P++LDY +  +N SLYNTP  Y IY+  LVFE+LL+LGG+  +EK+N +KA+L+Y+ ID S+  Y CPV+K  RS MNV F L+  +L            +  L GHR VGG RASIYN+MPL GV+KLV+FMKDF++K
Sbjct:  183 SRKIDVKDFGVIFAGAQKNIGPSGLSLAIIRNDLLGISGRKIPILLDYSVMVKNRSLYNTPSTYSIYIAKLVFEWLLKLGGIEAIEKVNEQKAKLIYDFID-SSSLYVCPVQKRARSKMNVVFLLKDKNLDSKFLDEAEKNGLHGLGGHRLVGGFRASIYNSMPLTGVQKLVSFMKDFESK 362          
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_LEPIC (Phosphoserine aminotransferase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=serC PE=3 SV=2)

HSP 1 Score: 194.897 bits (494), Expect = 3.668e-49
Identity = 97/181 (53.59%), Postives = 130/181 (71.82%), Query Frame = -2
Query:  175 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK 717
            S+ +DV  FGVI+AGAQKN+GPSG+++ I+R DLLG +  K P++LDY +  +N SLYNTP  Y IY+  LVFE+LL+LGG+  +EK+N +KA+L+Y+ ID S+  Y CPV+K  RS MNV F L+  +L            +  L GHR VGG RASIYN+MPL GV+KLV+FMKDF++K
Sbjct:  183 SRKIDVKDFGVIFAGAQKNIGPSGLSLAIIRNDLLGISGRKIPILLDYSVMVKNRSLYNTPSTYSIYIAKLVFEWLLKLGGIEAIEKVNEQKAKLIYDFID-SSSLYVCPVQKRARSKMNVVFLLKDKNLDSKFLDEAEKNGLHGLGGHRLVGGFRASIYNSMPLTGVQKLVSFMKDFESK 362          
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_EDWI9 (Phosphoserine aminotransferase OS=Edwardsiella ictaluri (strain 93-146) GN=serC PE=3 SV=2)

HSP 1 Score: 194.897 bits (494), Expect = 3.668e-49
Identity = 97/182 (53.30%), Postives = 132/182 (72.53%), Query Frame = -2
Query:  172 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 717
            S+P+DV+R+G+IYAGAQKNVGP+G+T+VIVR+DLLG A+ + P +LDY++  E++S++NTPP +  Y+ G+VF++L E GG++E+ + N+ KA+LLY  IDG   FYR  V  + RS MNVPF +  S L            +  LKGH+  GGMRASIYNAMPLAGV+ LVAFM DF  +H
Sbjct:  182 SRPIDVSRYGLIYAGAQKNVGPAGITLVIVREDLLGRARREIPSILDYQVLVESDSMFNTPPTFAWYLSGMVFKWLKEQGGVSEMARRNQAKADLLYQAIDGGE-FYRNDVAPANRSRMNVPFQMVDSALDPLFWDEARKAGLHALKGHKVAGGMRASIYNAMPLAGVQALVAFMADFARRH 362          
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_ENTS8 (Phosphoserine aminotransferase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=serC PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 4.790e-49
Identity = 99/182 (54.40%), Postives = 129/182 (70.88%), Query Frame = -2
Query:  172 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 717
            S P+DV+R+GVIYAGAQKN+GP+G+T+VIVR+DLLG A    P +LDY +  EN+S++NTPP +  Y+ GLVF++L   GG+  ++K+N++KA+LLY VID S+ FYR  V  + RS MNVPF L  S L            +  LKGHR VGGMRASIYNAMPL GV+ L  FM DF+ +H
Sbjct:  180 SHPIDVSRYGVIYAGAQKNIGPAGLTLVIVREDLLGKAHVSCPSVLDYSVLSENDSMFNTPPTFAWYLAGLVFKWLKTNGGVAAMDKINQQKADLLYGVIDNSD-FYRNDVATANRSRMNVPFQLADSSLDKLFLEESFAAGLHALKGHRVVGGMRASIYNAMPLEGVKALTDFMVDFERRH 360          
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_ESCF3 (Phosphoserine aminotransferase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=serC PE=3 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 6.256e-49
Identity = 100/182 (54.95%), Postives = 130/182 (71.43%), Query Frame = -2
Query:  172 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 717
            S+P+DV+R+GVIYAGAQKN+GP+G+TIVIVR+DLLG A    P +LDY I ++N+S++NTPP +  Y+ GLVF++L   GG+  ++K+N++KAELLY  ID S+ FYR  V K+ RS MNVPF L  + L            +  LKGHR VGGMRASIYNAMPL GV  L  FM DF+ +H
Sbjct:  181 SRPIDVSRYGVIYAGAQKNIGPAGLTIVIVREDLLGKANIACPSILDYSILNDNDSMFNTPPTFAWYLSGLVFKWLKANGGVAAMDKINQQKAELLYGAIDNSD-FYRNDVAKANRSRMNVPFQLADNALDKLFLEESFAAGLHALKGHRVVGGMRASIYNAMPLEGVIALTDFMADFERRH 361          
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_AZOSE (Phosphoserine aminotransferase OS=Azoarcus sp. (strain EbN1) GN=serC PE=3 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 6.256e-49
Identity = 97/182 (53.30%), Postives = 128/182 (70.33%), Query Frame = -2
Query:  172 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 717
            S+P+D+ R+G+IYAGAQKN+GPSG+ +VIVR+DLLG+A   TP ++DY++  EN S+ NTPP Y IY+ GLVF +L   GGL  VE  N  K++LLY+ +D S+ FY   V +  RS MN+PF L    L            + QLKGH+SVGGMRASIYNAMPLAGV+ LV +M+DF A++
Sbjct:  185 SRPLDIGRYGLIYAGAQKNIGPSGLVVVIVREDLLGHASPVTPTIMDYRVMAENGSMLNTPPTYAIYIAGLVFRWLKAQGGLAAVEANNIAKSDLLYDFLDASD-FYENRVAQDSRSRMNIPFLLRDDALNDPFLAGAKAAGLTQLKGHKSVGGMRASIYNAMPLAGVQALVDYMRDFSARN 365          
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_PSEST (Phosphoserine aminotransferase OS=Pseudomonas stutzeri GN=serC PE=3 SV=2)

HSP 1 Score: 193.741 bits (491), Expect = 8.171e-49
Identity = 98/182 (53.85%), Postives = 126/182 (69.23%), Query Frame = -2
Query:  172 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 717
            S+ +DV++FG+IYAGAQKN+GPSG+ +VIVR DLLG A+   P MLDYKI  +N S+YNTP  +  Y+ GLVFE+L E GG+  +E+ NR K ELLY  ID S  FY  P+ ++ RS+MNVPF L    L            ++ LKGHRSVGGMRASIYNA+ L  VE LVA+M +F+ +H
Sbjct:  180 SRAIDVSKFGLIYAGAQKNIGPSGLVVVIVRDDLLGKARSSCPTMLDYKIAADNGSMYNTPATFSWYLSGLVFEWLKEQGGVEVMEQRNRAKKELLYGFIDASE-FYTNPIAENARSWMNVPFRLADERLDKAFLAGADARGLLNLKGHRSVGGMRASIYNAVGLDAVEALVAYMAEFEKEH 360          
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_PSEPK (Phosphoserine aminotransferase OS=Pseudomonas putida (strain KT2440) GN=serC PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 8.171e-49
Identity = 96/182 (52.75%), Postives = 126/182 (69.23%), Query Frame = -2
Query:  172 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 717
            S+P+DV++FG+IYAGAQKN+GPSG+ +VIVR+DLLG+A+   P MLDYK+  +N S+YNTP  Y  Y+ GLVFE+L E GG+  +E+ NR K + LY  ID S  FY  P+  + RS+MNVPF L    L            ++ LKGHRSVGGMRASIYNA+ L  VE LV +M +F+ +H
Sbjct:  180 SRPIDVSQFGLIYAGAQKNIGPSGLVVVIVREDLLGHARSSCPTMLDYKVSADNGSMYNTPATYSWYLSGLVFEWLKEQGGVEAMEQRNRAKKDRLYGFIDRSE-FYTNPISVNARSWMNVPFRLADERLDKAFLAGADARGLLNLKGHRSVGGMRASIYNALGLEAVEALVGYMAEFEKEH 360          
The following BLAST results are available for this feature:
BLAST of CV712730 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 255
Match NameE-valueIdentityDescription
SERC_PSEE43.668e-4952.46Phosphoserine aminotransferase OS=Pseudomonas ento... [more]
SERC_PECCP3.668e-4954.95Phosphoserine aminotransferase OS=Pectobacterium c... [more]
SERC_LEPIN3.668e-4953.59Phosphoserine aminotransferase OS=Leptospira inter... [more]
SERC_LEPIC3.668e-4953.59Phosphoserine aminotransferase OS=Leptospira inter... [more]
SERC_EDWI93.668e-4953.30Phosphoserine aminotransferase OS=Edwardsiella ict... [more]
SERC_ENTS84.790e-4954.40Phosphoserine aminotransferase OS=Enterobacter sak... [more]
SERC_ESCF36.256e-4954.95Phosphoserine aminotransferase OS=Escherichia ferg... [more]
SERC_AZOSE6.256e-4953.30Phosphoserine aminotransferase OS=Azoarcus sp. (st... [more]
SERC_PSEST8.171e-4953.85Phosphoserine aminotransferase OS=Pseudomonas stut... [more]
SERC_PSEPK8.171e-4952.75Phosphoserine aminotransferase OS=Pseudomonas puti... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001N03_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001N03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712730 ID=CV712730; Name=CV712730; organism=Citrus sinensis; type=EST; length=721bp
TTTTTAGCCAGAAAAATACTCAACTACCATACCACGTTAAAAAGCAACAA
AAACATAAATAAGACAGACAAGAGAAAAACCAAAATCCTACATATTTTTC
TACTAAAAAAAAGGACTCTGGATTCAAGCCACAGCCAAAGCCAATCAACA
ACACTAAAGCAAAAATCAAGCATGCTTTGCCTGGAAATCCTTCATGAAAG
CAACCAACTTCTCAACGCCAGCCAAAGGCATAGCATTATATATTGAAGCC
CTCATTCCTCCAACTGACCTATGCCCCTTCAATTGCACCATCTTCTCCTT
AGCAGCTTCCTTCACAAACTCAGCTTCCAAATCAGACTTCTCCAGAGTAA
ACGGCACATTCATGAATGACCTCACAGATTTCTCAACTGGGCATCTATAG
AACCCGTTGCTTCCGTCAATGACGTTGTATAACAATTCAGCCTTCTTCCT
GTTCATCTTCTCAACTTCATTCAACCCACCCAATTCTAGCAAATACTCAA
AAACTAATCCACACATGTAGATACAATAACAAGGCGGTGTATTGTAAAGT
GAATTGTTTTCATCGTGAATCTTATAATCCAACATCAGAGGAGTCTTGTC
TTGAGCATTTCCAAGCAGATCCTTCCTAACAATCACGATTGTGACCCCAG
ATGGCCCCACGTTTTTCTGAGCTCCAGCATAAATTACACCAAACCTGGTA
ACATCAACAGGCTTTGAACAA
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