CV712730

Overview
NameCV712730
Unique NameCV712730
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length721
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_SALPB (Phosphoserine aminotransferase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=serC PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.820e-48
Identity = 97/182 (53.30%), Postives = 131/182 (71.98%), Query Frame = -2 
Query:  172 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 717
            S P+DV+R+GVIYAGAQKN+GP+G+T+VIVR+DLLG A +  P +LDY + ++N+S++NTPP +  Y+ GLVF++L   GG+  + K+N++KAELLY VID S+ FYR  V ++ RS MNVPF L  + L            +  LKGHR VGGMRASIYNAMP+ GV+ L  FM DF+ +H
Sbjct:  181 SAPLDVSRYGVIYAGAQKNIGPAGLTLVIVREDLLGKAHESCPSILDYTVLNDNDSMFNTPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAELLYGVIDNSD-FYRNDVAQANRSRMNVPFQLADNALDKVFLEESFAAGLHALKGHRVVGGMRASIYNAMPIEGVKALTDFMIDFERRH 361
[Close]
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_SALHS (Phosphoserine aminotransferase OS=Salmonella heidelberg (strain SL476) GN=serC PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.820e-48
Identity = 97/182 (53.30%), Postives = 131/182 (71.98%), Query Frame = -2 
Query:  172 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 717
            S P+DV+R+GVIYAGAQKN+GP+G+T+VIVR+DLLG A +  P +LDY + ++N+S++NTPP +  Y+ GLVF++L   GG+  + K+N++KAELLY VID S+ FYR  V ++ RS MNVPF L  + L            +  LKGHR VGGMRASIYNAMP+ GV+ L  FM DF+ +H
Sbjct:  181 SAPLDVSRYGVIYAGAQKNIGPAGLTLVIVREDLLGKAHESCPSILDYTVLNDNDSMFNTPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAELLYGVIDNSD-FYRNDVAQANRSRMNVPFQLADNALDKVFLEESFAAGLHALKGHRVVGGMRASIYNAMPIEGVKALTDFMIDFERRH 361
[Close]
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_SALGL (Phosphoserine aminotransferase OS=Salmonella gallinarum GN=serC PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.820e-48
Identity = 97/182 (53.30%), Postives = 131/182 (71.98%), Query Frame = -2 
Query:  172 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 717
            S P+DV+R+GVIYAGAQKN+GP+G+T+VIVR+DLLG A +  P +LDY + ++N+S++NTPP +  Y+ GLVF++L   GG+  + K+N++KAELLY VID S+ FYR  V ++ RS MNVPF L  + L            +  LKGHR VGGMRASIYNAMP+ GV+ L  FM DF+ +H
Sbjct:  181 SAPLDVSRYGVIYAGAQKNIGPAGLTLVIVREDLLGKAHESCPSILDYTVLNDNDSMFNTPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAELLYGVIDNSD-FYRNDVAQANRSRMNVPFQLADNALDKVFLEESFAAGLHALKGHRVVGGMRASIYNAMPIEGVKALTDFMIDFERRH 361
[Close]
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_SALG2 (Phosphoserine aminotransferase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=serC PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.820e-48
Identity = 97/182 (53.30%), Postives = 131/182 (71.98%), Query Frame = -2 
Query:  172 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 717
            S P+DV+R+GVIYAGAQKN+GP+G+T+VIVR+DLLG A +  P +LDY + ++N+S++NTPP +  Y+ GLVF++L   GG+  + K+N++KAELLY VID S+ FYR  V ++ RS MNVPF L  + L            +  LKGHR VGGMRASIYNAMP+ GV+ L  FM DF+ +H
Sbjct:  181 SAPLDVSRYGVIYAGAQKNIGPAGLTLVIVREDLLGKAHESCPSILDYTVLNDNDSMFNTPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAELLYGVIDNSD-FYRNDVAQANRSRMNVPFQLADNALDKVFLEESFAAGLHALKGHRVVGGMRASIYNAMPIEGVKALTDFMIDFERRH 361
[Close]
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_SALEP (Phosphoserine aminotransferase OS=Salmonella enteritidis PT4 (strain P125109) GN=serC PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.820e-48
Identity = 97/182 (53.30%), Postives = 131/182 (71.98%), Query Frame = -2 
Query:  172 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 717
            S P+DV+R+GVIYAGAQKN+GP+G+T+VIVR+DLLG A +  P +LDY + ++N+S++NTPP +  Y+ GLVF++L   GG+  + K+N++KAELLY VID S+ FYR  V ++ RS MNVPF L  + L            +  LKGHR VGGMRASIYNAMP+ GV+ L  FM DF+ +H
Sbjct:  181 SAPLDVSRYGVIYAGAQKNIGPAGLTLVIVREDLLGKAHESCPSILDYTVLNDNDSMFNTPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAELLYGVIDNSD-FYRNDVAQANRSRMNVPFQLADNALDKVFLEESFAAGLHALKGHRVVGGMRASIYNAMPIEGVKALTDFMIDFERRH 361
[Close]
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_SALDC (Phosphoserine aminotransferase OS=Salmonella dublin (strain CT_02021853) GN=serC PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.820e-48
Identity = 97/182 (53.30%), Postives = 131/182 (71.98%), Query Frame = -2 
Query:  172 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 717
            S P+DV+R+GVIYAGAQKN+GP+G+T+VIVR+DLLG A +  P +LDY + ++N+S++NTPP +  Y+ GLVF++L   GG+  + K+N++KAELLY VID S+ FYR  V ++ RS MNVPF L  + L            +  LKGHR VGGMRASIYNAMP+ GV+ L  FM DF+ +H
Sbjct:  181 SAPLDVSRYGVIYAGAQKNIGPAGLTLVIVREDLLGKAHESCPSILDYTVLNDNDSMFNTPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAELLYGVIDNSD-FYRNDVAQANRSRMNVPFQLADNALDKVFLEESFAAGLHALKGHRVVGGMRASIYNAMPIEGVKALTDFMIDFERRH 361
[Close]
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_SALA4 (Phosphoserine aminotransferase OS=Salmonella agona (strain SL483) GN=serC PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.820e-48
Identity = 97/182 (53.30%), Postives = 131/182 (71.98%), Query Frame = -2 
Query:  172 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 717
            S P+DV+R+GVIYAGAQKN+GP+G+T+VIVR+DLLG A +  P +LDY + ++N+S++NTPP +  Y+ GLVF++L   GG+  + K+N++KAELLY VID S+ FYR  V ++ RS MNVPF L  + L            +  LKGHR VGGMRASIYNAMP+ GV+ L  FM DF+ +H
Sbjct:  181 SAPLDVSRYGVIYAGAQKNIGPAGLTLVIVREDLLGKAHESCPSILDYTVLNDNDSMFNTPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAELLYGVIDNSD-FYRNDVAQANRSRMNVPFQLADNALDKVFLEESFAAGLHALKGHRVVGGMRASIYNAMPIEGVKALTDFMIDFERRH 361
[Close]
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_BORPA (Phosphoserine aminotransferase OS=Bordetella parapertussis GN=serC PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.820e-48
Identity = 95/182 (52.20%), Postives = 128/182 (70.33%), Query Frame = -2 
Query:  172 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 717
            S+P+D+ R G+++AGAQKN GP+GVT+VI R+DLLG+A    P   DY     ++S YNTPP + IY+ GLVF+++   GG+  +E+ NR KAELLY  +DGS  FYR PV+ +VRS MNVPF L    L            ++QLKGH+SVGGMRASIYNAMPLAGV+ L+ ++K+F+ +H
Sbjct:  196 SRPLDIARAGLVFAGAQKNAGPAGVTVVIARRDLLGHALPICPSAFDYANVAADHSRYNTPPTFAIYVMGLVFKWIKAHGGVRGMEEANRAKAELLYGYLDGS-AFYRNPVQPAVRSRMNVPFVLRDESLNDAFLQGAEAAGLMQLKGHKSVGGMRASIYNAMPLAGVQALIDYLKEFERRH 376
[Close]
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_BORBR (Phosphoserine aminotransferase OS=Bordetella bronchiseptica GN=serC PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.820e-48
Identity = 95/182 (52.20%), Postives = 128/182 (70.33%), Query Frame = -2 
Query:  172 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 717
            S+P+D+ R G+++AGAQKN GP+GVT+VI R+DLLG+A    P   DY     ++S YNTPP + IY+ GLVF+++   GG+  +E+ NR KAELLY  +DGS  FYR PV+ +VRS MNVPF L    L            ++QLKGH+SVGGMRASIYNAMPLAGV+ L+ ++K+F+ +H
Sbjct:  196 SRPLDIARAGLVFAGAQKNAGPAGVTVVIARRDLLGHALPICPSAFDYANVAADHSRYNTPPTFAIYVMGLVFKWIKAHGGVRGMEEANRAKAELLYGYLDGS-AFYRNPVQPAVRSRMNVPFVLRDESLNDAFLQGAEAAGLMQLKGHKSVGGMRASIYNAMPLAGVQALIDYLKEFERRH 376
[Close]
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_BACCR (Phosphoserine aminotransferase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=serC PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.377e-48
Identity = 92/182 (50.55%), Postives = 130/182 (71.43%), Query Frame = -2 
Query:  172 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 717
            S+  DV++FG+IYAGAQKN+GP+G+TI I+++DL+G A    P ML+Y+ + +NNSLYNTPP + IY+  LV E+L E GG++ +E+ NR K+ LLYN +D S   +  PV+ + RS MN+PFT    +L            +V LKGHRSVGGMRASIYNAMP+ GV++LV +MK+F+ ++
Sbjct:  179 SERYDVSKFGLIYAGAQKNLGPAGLTIAIIKRDLIGEADRSCPTMLNYETYSKNNSLYNTPPSFSIYVTKLVLEWLKEQGGVSAIEEQNRMKSSLLYNFLDESK-LFTSPVDPTYRSLMNIPFTTPSEELNSEFLQKAKERGLVTLKGHRSVGGMRASIYNAMPVQGVQQLVNYMKEFELEN 359
The following BLAST results are available for this feature:
BLAST of CV712730 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 255
Match NameE-valueIdentityDescription
SERC_SALPB1.820e-4853.30Phosphoserine aminotransferase OS=Salmonella parat... [more]
SERC_SALHS1.820e-4853.30Phosphoserine aminotransferase OS=Salmonella heide... [more]
SERC_SALGL1.820e-4853.30Phosphoserine aminotransferase OS=Salmonella galli... [more]
SERC_SALG21.820e-4853.30Phosphoserine aminotransferase OS=Salmonella galli... [more]
SERC_SALEP1.820e-4853.30Phosphoserine aminotransferase OS=Salmonella enter... [more]
SERC_SALDC1.820e-4853.30Phosphoserine aminotransferase OS=Salmonella dubli... [more]
SERC_SALA41.820e-4853.30Phosphoserine aminotransferase OS=Salmonella agona... [more]
SERC_BORPA1.820e-4852.20Phosphoserine aminotransferase OS=Bordetella parap... [more]
SERC_BORBR1.820e-4852.20Phosphoserine aminotransferase OS=Bordetella bronc... [more]
SERC_BACCR2.377e-4850.55Phosphoserine aminotransferase OS=Bacillus cereus ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001N03_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001N03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712730 ID=CV712730; Name=CV712730; organism=Citrus sinensis; type=EST; length=721bp
TTTTTAGCCAGAAAAATACTCAACTACCATACCACGTTAAAAAGCAACAA
AAACATAAATAAGACAGACAAGAGAAAAACCAAAATCCTACATATTTTTC
TACTAAAAAAAAGGACTCTGGATTCAAGCCACAGCCAAAGCCAATCAACA
ACACTAAAGCAAAAATCAAGCATGCTTTGCCTGGAAATCCTTCATGAAAG
CAACCAACTTCTCAACGCCAGCCAAAGGCATAGCATTATATATTGAAGCC
CTCATTCCTCCAACTGACCTATGCCCCTTCAATTGCACCATCTTCTCCTT
AGCAGCTTCCTTCACAAACTCAGCTTCCAAATCAGACTTCTCCAGAGTAA
ACGGCACATTCATGAATGACCTCACAGATTTCTCAACTGGGCATCTATAG
AACCCGTTGCTTCCGTCAATGACGTTGTATAACAATTCAGCCTTCTTCCT
GTTCATCTTCTCAACTTCATTCAACCCACCCAATTCTAGCAAATACTCAA
AAACTAATCCACACATGTAGATACAATAACAAGGCGGTGTATTGTAAAGT
GAATTGTTTTCATCGTGAATCTTATAATCCAACATCAGAGGAGTCTTGTC
TTGAGCATTTCCAAGCAGATCCTTCCTAACAATCACGATTGTGACCCCAG
ATGGCCCCACGTTTTTCTGAGCTCCAGCATAAATTACACCAAACCTGGTA
ACATCAACAGGCTTTGAACAA
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