CV712730

Overview
NameCV712730
Unique NameCV712730
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length721
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_HUMAN (Phosphoserine aminotransferase OS=Homo sapiens GN=PSAT1 PE=1 SV=2)

HSP 1 Score: 191.815 bits (486), Expect = 3.105e-48
Identity = 99/186 (53.23%), Postives = 128/186 (68.82%), Query Frame = -2
Query:  172 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTL--EKSD--LXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 717
            SKPVDV++FGVI+AGAQKNVG +GVT+VIVR DLLG A  + P +L+YK+   N+SLYNTPPC+ IY+ GLV E++   GG   +EK++  K++ +Y +ID S GFY CPVE   RS MN+PF +   K D  L            M+ LKGHRSVGG+RAS+YNA+ +  V+KL AFMK F   H
Sbjct:  183 SKPVDVSKFGVIFAGAQKNVGSAGVTVVIVRDDLLGFALRECPSVLEYKVQAGNSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFRIGNAKGDDALEKRFLDKALELNMLSLKGHRSVGGIRASLYNAVTIEDVQKLAAFMKKFLEMH 368          
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_VIBCH (Phosphoserine aminotransferase OS=Vibrio cholerae GN=serC PE=3 SV=2)

HSP 1 Score: 191.43 bits (485), Expect = 4.055e-48
Identity = 98/183 (53.55%), Postives = 127/183 (69.40%), Query Frame = -2
Query:  169 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKHA 717
            S+ +DV+++GVIYAGAQKN+GP+G+ I IVR DLL  A D  P +L+YKI  E  S++NTPP +  Y+ GLVF++L   GG+  +E++NR KA LLY  ID S+ FYR  +    RS MNVPF L K +L            +V LKGHR VGGMRASIYNAMPL GV+ LV FMK+F+A++A
Sbjct:  183 SREIDVSKYGVIYAGAQKNIGPAGICIAIVRDDLLDLASDLLPGVLNYKILAEQESMFNTPPTFAWYLSGLVFQWLKAQGGVKAIEEVNRAKAALLYGYIDSSD-FYRNEIHPDNRSLMNVPFQLAKPELDDTFLELAEARGLVSLKGHRVVGGMRASIYNAMPLEGVQALVDFMKEFEAQYA 364          
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_SALAR (Phosphoserine aminotransferase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=serC PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 4.055e-48
Identity = 96/182 (52.75%), Postives = 131/182 (71.98%), Query Frame = -2
Query:  172 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 717
            S P+DV+R+GVIYAGAQKN+GP+G+T+VIVR+DLLG A +  P +LDY + ++N+S++NTPP +  Y+ GLVF++L   GG+  + K+N++KA+LLY VID S+ FYR  V ++ RS MNVPF L  + L            +  LKGHR VGGMRASIYNAMP+ GV+ L  FM DF+ +H
Sbjct:  181 SAPLDVSRYGVIYAGAQKNIGPAGLTLVIVREDLLGKAHENCPSILDYTVLNDNDSMFNTPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAQLLYGVIDNSD-FYRNDVAQANRSRMNVPFQLADNALDKVFLEESFAAGLHALKGHRVVGGMRASIYNAMPIEGVKALTDFMIDFERRH 361          
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_PSEU2 (Phosphoserine aminotransferase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=serC PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 4.055e-48
Identity = 94/182 (51.65%), Postives = 123/182 (67.58%), Query Frame = -2
Query:  172 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 717
            S+P+D++RFG+IYAGAQKN+GPSG+ +VI+R+DLLG A+   P MLDYK+  +N S+YNTPP    Y+ GLVFE+L E GG+  + K N  K   LY+ ID S   Y  P+ K  RS+MNVPF L    L            ++ LKGHRSVGGMRASIYNA+ +  +  LVA+MKDF+ +H
Sbjct:  180 SRPLDISRFGMIYAGAQKNIGPSGIVVVIIREDLLGRARSLCPTMLDYKVAADNGSMYNTPPTLAWYLSGLVFEWLKEQGGVEAIGKRNEIKQRTLYDFIDASE-LYSNPINKPDRSWMNVPFRLADDRLDKPFLAGADANGLLNLKGHRSVGGMRASIYNAIDINAINALVAYMKDFEKEH 360          
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_PHOLL (Phosphoserine aminotransferase OS=Photorhabdus luminescens subsp. laumondii GN=serC PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 4.055e-48
Identity = 97/182 (53.30%), Postives = 129/182 (70.88%), Query Frame = -2
Query:  172 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 717
            S P+DV+R+G+IYAGAQKN+GP+G+T+VIVR+DLLG A+ +TP + DY +  EN+S++NTPP +  Y+ GLVF++L E GG+ E+ K NR KAELLY+VID S+ FYR  V    RS MNVPF +  + L            +  LKGHR  GGMRASIYNAM + GV+ LV FM DF+ ++
Sbjct:  181 SGPLDVSRYGMIYAGAQKNIGPAGITLVIVREDLLGKARKETPSIFDYAVLAENDSMFNTPPTFAWYLSGLVFKWLKEQGGVQEMAKRNRAKAELLYDVIDKSD-FYRNQVAPENRSLMNVPFQMVDASLDSKFLAEADAQGLQALKGHRVSGGMRASIYNAMSIEGVQALVDFMADFERRN 361          
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_BACC1 (Phosphoserine aminotransferase OS=Bacillus cereus (strain ATCC 10987) GN=serC PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 4.055e-48
Identity = 92/182 (50.55%), Postives = 129/182 (70.88%), Query Frame = -2
Query:  172 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 717
            S+  DV++FG+IYAGAQKN+GP+G+TI I+++DL+G A    P ML+Y+ + +NNSLYNTPP + IY+  LV E+L E GG++ +E+ NR K+ LLYN +D S   +  PV+ + RS MN+PFT    +L            +V LKGHRSVGGMRASIYNAMP  GV++LV +MK+F+ ++
Sbjct:  179 SERYDVSKFGLIYAGAQKNLGPAGLTIAIIKRDLIGGADRSCPTMLNYETYSKNNSLYNTPPSFSIYVTKLVLEWLKEQGGVSAIEEQNRMKSSLLYNFLDESK-LFTSPVDPTYRSLMNIPFTTPSEELNSEFLQKAKERGLVTLKGHRSVGGMRASIYNAMPAEGVQQLVNYMKEFELEN 359          
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_SODGM (Phosphoserine aminotransferase OS=Sodalis glossinidius (strain morsitans) GN=serC PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 6.917e-48
Identity = 100/182 (54.95%), Postives = 125/182 (68.68%), Query Frame = -2
Query:  172 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 717
            S P+DV+RFGVIYAGAQKN+GP+G+T+VIVR+DLLG A    P +LDY +  EN+S++NTPP +  Y+ GLVF++L   GGL E++K N+ KA LLY  ID S  FYR  V  + RS MNVPF L  S L            +  LKGHR VGGMRAS+YNA+PL GV+ LV FM DF  +H
Sbjct:  180 SHPLDVSRFGVIYAGAQKNIGPAGLTLVIVREDLLGRASKALPSILDYSVLAENDSMFNTPPTFAWYLSGLVFKWLKAQGGLAEMDKRNQAKASLLYRTIDESY-FYRNTVASANRSRMNVPFQLADSKLDALFLQESFAAGLHALKGHRVVGGMRASLYNAVPLEGVQALVDFMLDFARRH 360          
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_GEOKA (Phosphoserine aminotransferase OS=Geobacillus kaustophilus GN=serC PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 6.917e-48
Identity = 96/183 (52.46%), Postives = 122/183 (66.67%), Query Frame = -2
Query:  169 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKHA 717
            S+P DV++F +IYAGAQKN+GPSGVT+VI+R DLL    D  P MLDY+ H ++NSLYNTPP + IYM  LV E++ E GG+  +E+ N++KA +LY  ID S GFY+   EK  RS MNV FTL   +L             V L GHRSVGG RASIYNA+PL   E L +FM +F+ + A
Sbjct:  178 SRPFDVSQFALIYAGAQKNLGPSGVTVVILRNDLLERIPDGLPTMLDYRTHQKSNSLYNTPPTFAIYMLSLVLEWVEEQGGVAAMEERNQQKAAVLYEAIDESGGFYKPHAEKGSRSLMNVTFTLPNEELTKTFLAEAKERGFVGLGGHRSVGGCRASIYNAVPLEACEALASFMNEFRRRFA 360          
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_BACCZ (Phosphoserine aminotransferase OS=Bacillus cereus (strain ZK / E33L) GN=serC PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 9.034e-48
Identity = 91/182 (50.00%), Postives = 130/182 (71.43%), Query Frame = -2
Query:  172 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKH 717
            S+  DV++FG+IYAGAQKN+GP+G+TI I+++DL+G A    P ML+Y+ + +NNSLYNTPP + IY+  LV E+L E GG++ +E+ N+ K+ LLYN +D S   +  PV+ + RS MN+PFT    +L            +V LKGHRSVGGMRASIYNAMP+ GV++LV +MK+F+ ++
Sbjct:  179 SERYDVSKFGLIYAGAQKNLGPAGLTIAIIKRDLIGGADRYCPTMLNYETYSKNNSLYNTPPSFSIYVTKLVLEWLKEQGGVSAIEEQNKMKSSLLYNFLDESK-LFTSPVDPTYRSLMNIPFTTPSEELNNEFLQKAKERGLVTLKGHRSVGGMRASIYNAMPVQGVQQLVNYMKEFELEN 359          
BLAST of CV712730 vs. ExPASy Swiss-Prot
Match: SERC_LISMF (Phosphoserine aminotransferase OS=Listeria monocytogenes serotype 4b (strain F2365) GN=serC PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.013e-47
Identity = 95/178 (53.37%), Postives = 123/178 (69.10%), Query Frame = -2
Query:  184 SKPVDVTRFGVIYAGAQKNVGPSGVTIVIVRKDLLGNAQDKTPLMLDYKIHDENNSLYNTPPCYCIYMCGLVFEYLLELGGLNEVEKMNRKKAELLYNVIDGSNGFYRCPVEKSVRSFMNVPFTLEKSDLXXXXXXXXXXXKMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDF 717
            S   DV +FG+IYAGAQKN+GP+G+T+VIVR+DL+G  +   P MLD+K+  EN+S+YNTPP + IY+  LVFE++ E GG+  +E +NRKKA LLYN ID S+ F+  PVE S RS  NVPF    ++                LKGHRSVGGMRAS+YNA P+ GVE L+AFM+ F
Sbjct:  177 SSVYDVKKFGLIYAGAQKNIGPAGLTLVIVREDLIGQVEG-LPSMLDFKVQAENDSMYNTPPTFAIYVAKLVFEWIKEQGGVAGIEALNRKKAALLYNYIDQSD-FFSSPVEPSARSLTNVPFVTNSAEFDKAFVQEAEANGFKNLKGHRSVGGMRASLYNAFPIEGVEALIAFMEKF 352          
The following BLAST results are available for this feature:
BLAST of CV712730 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 255
Match NameE-valueIdentityDescription
SERC_HUMAN3.105e-4853.23Phosphoserine aminotransferase OS=Homo sapiens GN=... [more]
SERC_VIBCH4.055e-4853.55Phosphoserine aminotransferase OS=Vibrio cholerae ... [more]
SERC_SALAR4.055e-4852.75Phosphoserine aminotransferase OS=Salmonella arizo... [more]
SERC_PSEU24.055e-4851.65Phosphoserine aminotransferase OS=Pseudomonas syri... [more]
SERC_PHOLL4.055e-4853.30Phosphoserine aminotransferase OS=Photorhabdus lum... [more]
SERC_BACC14.055e-4850.55Phosphoserine aminotransferase OS=Bacillus cereus ... [more]
SERC_SODGM6.917e-4854.95Phosphoserine aminotransferase OS=Sodalis glossini... [more]
SERC_GEOKA6.917e-4852.46Phosphoserine aminotransferase OS=Geobacillus kaus... [more]
SERC_BACCZ9.034e-4850.00Phosphoserine aminotransferase OS=Bacillus cereus ... [more]
SERC_LISMF2.013e-4753.37Phosphoserine aminotransferase OS=Listeria monocyt... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS08_0001N03_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001N03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712730 ID=CV712730; Name=CV712730; organism=Citrus sinensis; type=EST; length=721bp
TTTTTAGCCAGAAAAATACTCAACTACCATACCACGTTAAAAAGCAACAA
AAACATAAATAAGACAGACAAGAGAAAAACCAAAATCCTACATATTTTTC
TACTAAAAAAAAGGACTCTGGATTCAAGCCACAGCCAAAGCCAATCAACA
ACACTAAAGCAAAAATCAAGCATGCTTTGCCTGGAAATCCTTCATGAAAG
CAACCAACTTCTCAACGCCAGCCAAAGGCATAGCATTATATATTGAAGCC
CTCATTCCTCCAACTGACCTATGCCCCTTCAATTGCACCATCTTCTCCTT
AGCAGCTTCCTTCACAAACTCAGCTTCCAAATCAGACTTCTCCAGAGTAA
ACGGCACATTCATGAATGACCTCACAGATTTCTCAACTGGGCATCTATAG
AACCCGTTGCTTCCGTCAATGACGTTGTATAACAATTCAGCCTTCTTCCT
GTTCATCTTCTCAACTTCATTCAACCCACCCAATTCTAGCAAATACTCAA
AAACTAATCCACACATGTAGATACAATAACAAGGCGGTGTATTGTAAAGT
GAATTGTTTTCATCGTGAATCTTATAATCCAACATCAGAGGAGTCTTGTC
TTGAGCATTTCCAAGCAGATCCTTCCTAACAATCACGATTGTGACCCCAG
ATGGCCCCACGTTTTTCTGAGCTCCAGCATAAATTACACCAAACCTGGTA
ACATCAACAGGCTTTGAACAA
back to top