CV712690

Overview
NameCV712690
Unique NameCV712690
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length697
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4721 contig Csv1_Contig4721:14..710. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV712690 vs. ExPASy Swiss-Prot
Match: OLEO4_ARATH (Oleosin 20.3 kDa OS=Arabidopsis thaliana GN=OL2 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.511e-17
Identity = 42/106 (39.62%), Postives = 67/106 (63.21%), Query Frame = 2
Query:   86 QSRQPRSHQXXXXXXXXXXGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQVRMKLA 403
            +SR P ++Q          GG+LL L+GLT+AG+VI L ++ PL ++ SPV+VPA +T+ L + G LASG FG+  +S +SW+  Y+ G      +QL+  + ++A
Sbjct:   43 KSRGPSTNQILALIAGVPIGGTLLTLAGLTLAGSVIGLLVSIPLFLLFSPVIVPAALTIGLAVTGILASGLFGLTGLSSVSWVLNYLRGTSDTVPEQLDYAKRRMA 148          
BLAST of CV712690 vs. ExPASy Swiss-Prot
Match: OLEO2_SOYBN (P24 oleosin isoform B OS=Glycine max PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.989e-17
Identity = 44/116 (37.93%), Postives = 64/116 (55.17%), Query Frame = 2
Query:   92 RQPRSHQXXXXXXXXXXGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQVRMKLASKAREMRDRAEQ 439
            R P + Q          GG LL+L+GLT+AGT+  L +ATPL +I SPVL+PA + + L + GFL SG FG+ A+S  SWI  Y+    P   +     +  LA  A  +  + ++
Sbjct:   48 RGPTTSQVLAVVAGLPVGGILLLLAGLTLAGTLTGLVVATPLFIIFSPVLIPATVAIGLAVAGFLTSGVFGLTALSSFSWILNYIRETQPASENLAAAAKHHLAEAAEYVGQKTKE 163          
BLAST of CV712690 vs. ExPASy Swiss-Prot
Match: OLES2_BRANA (Oleosin S2-2 OS=Brassica napus GN=S2 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.822e-17
Identity = 45/120 (37.50%), Postives = 69/120 (57.50%), Query Frame = 2
Query:   44 DMAEHYQPHEQTQLQSRQPRSHQXXXXXXXXXXGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQVRMKLA 403
            D+   Y    +   +S  P S+Q          GGSLL L+GLT+AG+VI L ++ PL ++ SPV+VPA IT+ L +   LASG FG+  +S +SW+  Y+ G      +QL+  + ++A
Sbjct:   26 DVGYGYGYGGRADYKSSGPSSNQIVALIVGVPVGGSLLALAGLTLAGSVIGLMLSVPLFLLFSPVIVPAAITIGLAVTAILASGLFGLTGLSSVSWVLNYLRGTSDTVPEQLDYAKRRMA 145          
BLAST of CV712690 vs. ExPASy Swiss-Prot
Match: OLEO5_ARATH (Oleosin 5 OS=Arabidopsis thaliana GN=At3g01570 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.334e-16
Identity = 46/115 (40.00%), Postives = 68/115 (59.13%), Query Frame = 2
Query:   98 PRSHQXXXXXXXXXXGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYV--TGGHPPGADQLEQVRMKLASKAREMRDRAE 436
            P S Q          GG+LL ++GLT+AG+VI L +A PL +I SPV+VPA   + L + GFLASG  G+  +S +SW+  Y+   G H P  ++LE+ + +LA  A  +  R +
Sbjct:   32 PSSTQVLAVFVGVPIGGTLLTIAGLTLAGSVIGLMLAFPLFLIFSPVIVPAAFVIGLAMTGFLASGAIGLTGLSSMSWVLNYIRRAGQHIP--EELEEAKHRLADMAEYVGQRTK 144          
BLAST of CV712690 vs. ExPASy Swiss-Prot
Match: OLEO2_ARATH (Oleosin 21.2 kDa OS=Arabidopsis thaliana GN=At5g40420 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.972e-16
Identity = 40/86 (46.51%), Postives = 59/86 (68.60%), Query Frame = 2
Query:  146 GSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQVRMKLA 403
            GSLL L+GL +AG+VI L +A PL ++ SPV+VPA +T+ L + GFLASG FG+  +S +SW+  Y+ G      +QLE  + ++A
Sbjct:   65 GSLLALAGLLLAGSVIGLMVALPLFLLFSPVIVPAALTIGLAMTGFLASGMFGLTGLSSISWVMNYLRGTRRTVPEQLEYAKRRMA 150          
BLAST of CV712690 vs. ExPASy Swiss-Prot
Match: OLEO6_GOSHI (Oleosin 18.2 kDa OS=Gossypium hirsutum GN=MATP6-A PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.070e-16
Identity = 47/120 (39.17%), Postives = 70/120 (58.33%), Query Frame = 2
Query:   98 PRSHQXXXXXXXXXXGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWI---YRYVTGGHPPGAD----QLEQVRMKLASKAREMRDRAE 436
            P + Q          GG+LL L+GLT+AGTVI L +ATPL +I SPVLVPA I +++ + GFL+SG FG+  +S LS++    RY TG      D    +++ +   +  K +E+  + E
Sbjct:   38 PSTSQVLAVLTLLPIGGTLLALAGLTLAGTVIGLMLATPLFIIFSPVLVPAAIAIAMAVTGFLSSGAFGLTGLSSLSYVLNRLRYATGTEQLDLDHAKRRVQDMTEYVGQKTKEVGQKIE 157          
BLAST of CV712690 vs. ExPASy Swiss-Prot
Match: OLEO7_GOSHI (Oleosin 16.4 kDa OS=Gossypium hirsutum GN=MATP7 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.927e-15
Identity = 48/108 (44.44%), Postives = 66/108 (61.11%), Query Frame = 2
Query:   71 EQTQLQSRQPRSHQXXXXXXXXXXGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWI---YRYVTGGHPPGADQLEQ 385
            ++T  QS  P + Q          GG+LL L+GLT+ GTVI L +ATPL VI SPVLVPA I V + + GFL+SG FG+  +S LS++   +R  TG     AD+ ++
Sbjct:   18 DRTNYQSG-PSTTQVLTVLTLLPIGGTLLALAGLTLTGTVIGLCMATPLFVIFSPVLVPAAIAVFMAVAGFLSSGAFGLTGLSSLSYVFNRFRQATGTEQLDADRAKR 124          
BLAST of CV712690 vs. ExPASy Swiss-Prot
Match: OLES1_BRANA (Oleosin S1-2 OS=Brassica napus GN=S1 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.249e-14
Identity = 41/113 (36.28%), Postives = 63/113 (55.75%), Query Frame = 2
Query:   98 PRSHQXXXXXXXXXXGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQVRMKLASKAREMRDRAE 436
            P S Q          GG+LL L+GLT+A +VI L +A PL +I SPV+VPA   + L + GF+ASG  G+  +S +SW+  ++        D+L++ + +LA  A     R +
Sbjct:   32 PSSTQVLAVVAGVPVGGTLLTLAGLTLAVSVIGLILAFPLFLIFSPVIVPAAFVIGLAMTGFMASGAIGLTGLSSMSWVLNHIRRVRERIPDELDEAKQRLADMAEYAGQRTK 144          
BLAST of CV712690 vs. ExPASy Swiss-Prot
Match: OLEO_HELAN (Oleosin (Fragment) OS=Helianthus annuus PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.130e-14
Identity = 48/138 (34.78%), Postives = 74/138 (53.62%), Query Frame = 2
Query:   41 TDMAEHYQPHEQTQL--QSRQPRSHQXXXXXXXXXXGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYV--TGGHPPGADQLEQVRMKLASKAREMRDRAEQF 442
            T    HY+  ++++   Q+    + +          GG LL L+ LT  GT+I L +ATPL VI SP++VPAV+T+ L + GFLASG FG+  +S LS+++  V  T G  P  + L+ V+  L         + + F
Sbjct:   10 TTTQPHYRQDDRSRYDQQTHSQSTSRTLAIIALLPVGGILLGLAALTFIGTLIGLALATPLFVIFSPIIVPAVLTIGLAVTGFLASGTFGLTGLSSLSYLFNMVRQTAGSVP--ESLDYVKGTLQDAGEYAGQKTKDF 145          
BLAST of CV712690 vs. ExPASy Swiss-Prot
Match: OLEO2_ORYSJ (Oleosin 18 kDa OS=Oryza sativa subsp. japonica GN=OLE18 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.633e-14
Identity = 42/119 (35.29%), Postives = 62/119 (52.10%), Query Frame = 2
Query:   83 LQSRQPRSHQXXXXXXXXXXGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQVRMKLASKAREMRDRAEQ 439
            L  + P + Q          GG LLVLSGL +A +V+ L +ATP+ +I SPVLVPA + + L + GFL SG  G+  +S L+++            D +EQ R ++A  A     +  Q
Sbjct:   26 LPEKAPSASQALTVATLFPLGGLLLVLSGLALAASVVGLAVATPVFLIFSPVLVPAALLIGLAVAGFLTSGALGLGGLSSLTFLANTARQAFQRTPDYVEQARRRMAEAAAHAGHKTAQ 144          
The following BLAST results are available for this feature:
BLAST of CV712690 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
OLEO4_ARATH3.511e-1739.62Oleosin 20.3 kDa OS=Arabidopsis thaliana GN=OL2 PE... [more]
OLEO2_SOYBN5.989e-1737.93P24 oleosin isoform B OS=Glycine max PE=2 SV=1[more]
OLES2_BRANA7.822e-1737.50Oleosin S2-2 OS=Brassica napus GN=S2 PE=1 SV=1[more]
OLEO5_ARATH1.334e-1640.00Oleosin 5 OS=Arabidopsis thaliana GN=At3g01570 PE=... [more]
OLEO2_ARATH2.972e-1646.51Oleosin 21.2 kDa OS=Arabidopsis thaliana GN=At5g40... [more]
OLEO6_GOSHI5.070e-1639.17Oleosin 18.2 kDa OS=Gossypium hirsutum GN=MATP6-A ... [more]
OLEO7_GOSHI1.927e-1544.44Oleosin 16.4 kDa OS=Gossypium hirsutum GN=MATP7 PE... [more]
OLES1_BRANA1.249e-1436.28Oleosin S1-2 OS=Brassica napus GN=S1 PE=1 SV=1[more]
OLEO_HELAN2.130e-1434.78Oleosin (Fragment) OS=Helianthus annuus PE=2 SV=1[more]
OLEO2_ORYSJ3.633e-1435.29Oleosin 18 kDa OS=Oryza sativa subsp. japonica GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001M06_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001M06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712690 ID=CV712690; Name=CV712690; organism=Citrus sinensis; type=EST; length=697bp
TTATCATCGACAAATAATCGCCGTTAGATTTAACATCAACACTGATATGG
CTGAACATTACCAACCACACGAGCAGACACAGCTGCAGAGCCGTCAGCCC
CGGTCCCACCAGGTCGTGAAGGCGGCAACCGCCGTCACAGCCGGTGGGTC
TCTGTTGGTCCTCTCTGGCTTAACCATGGCTGGGACTGTCATTGCACTGA
CCATTGCTACTCCACTGCTAGTCATATGTAGTCCTGTTCTTGTCCCTGCG
GTTATCACCGTTTCTCTTCTCATCATGGGGTTCTTGGCCTCTGGCGGATT
CGGTGTAGCAGCCATCAGCGTCTTATCATGGATTTATAGGTATGTCACAG
GGGGGCACCCACCAGGGGCGGATCAGCTGGAGCAGGTGCGGATGAAGCTG
GCCAGTAAGGCTAGGGAGATGAGGGACAGGGCTGAGCAGTTTGGGCAGCA
GCAAAGCACTGGCTCGCAGCCGGGTTCTTAAACTACGTAGTTATGCATGT
GATGAAGGGTTGTTGGTTGATAAAGATATGGGTGGAGATCAAACGGCTAT
GATACTAGTTGAGGGGTCATTGGTTGTCTTTTGTGTTAATTTGTGTCAAT
GTGTTTTTTCCTTTTTTGTATTCGTGGTAATCTTTGTAATAAGTTTTGTT
AATGTGGTGGGGCGCTCTTGCAGGGTTTTTATTATTGGTCTTTGAAA
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