CV712684
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV712684 vs. ExPASy Swiss-Prot
Match: NU4C_EUCGG (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Eucalyptus globulus subsp. globulus GN=ndhD PE=3 SV=1) HSP 1 Score: 410.994 bits (1055), Expect = 3.463e-114 Identity = 205/237 (86.50%), Postives = 219/237 (92.41%), Query Frame = 2 Query: 2 IRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYGYKLFNAPNSYFFDSGPRELFVLISILLPVIGIGIYPDFVLSLSADKAEAIISNFF 712 +RINMELLPHAHSIFSPW +IVG +QIIYAA TSPGQRNLKKRIAYSSVSHMGFII+GIGSITDTGLNGA+LQIISHG I AALFFLAGTSYDRIR YLDEMGG+AI +PKIFT+FSILSMASLALPGMSGF+AELIVFFGIITS ++ LMPKI+ITFVMAIGMILTPIY LSMLRQMFYGYKLFN PNSYF D GPRELFV ISILLP+I IGIYPDFVLSLS DK EAIISN+F Sbjct: 263 VRINMELLPHAHSIFSPWLIIVGAIQIIYAALTSPGQRNLKKRIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGMAIHLPKIFTIFSILSMASLALPGMSGFLAELIVFFGIITSHQYLLMPKILITFVMAIGMILTPIYLLSMLRQMFYGYKLFNVPNSYFLDFGPRELFVSISILLPIIAIGIYPDFVLSLSVDKVEAIISNYF 499
BLAST of CV712684 vs. ExPASy Swiss-Prot
Match: NU4C_NANDO (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Nandina domestica GN=ndhD PE=3 SV=1) HSP 1 Score: 410.609 bits (1054), Expect = 4.523e-114 Identity = 205/237 (86.50%), Postives = 218/237 (91.98%), Query Frame = 2 Query: 2 IRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYGYKLFNAPNSYFFDSGPRELFVLISILLPVIGIGIYPDFVLSLSADKAEAIISNFF 712 +RINMELLPHAHSIFSPW MIVGT+QIIYAASTS GQRNLKKRIAYSSVSHMGF ILGI SITDTGLNGA+LQ+ISHG I AALFFLAGTSYDRIR YLDEMGG+AIP+PKIFTLFS SMASLALPGMSGFVAEL+VFFGIITS+KFFLMPKI+ITFV AIGMILTPIYSLSMLRQ+FYGYK FN PNS+FFDSGPRELFV I I LPVIGIGIYPDFV SLS DK EAI+SN+F Sbjct: 262 VRINMELLPHAHSIFSPWLMIVGTIQIIYAASTSLGQRNLKKRIAYSSVSHMGFTILGISSITDTGLNGAILQMISHGFIGAALFFLAGTSYDRIRLVYLDEMGGIAIPMPKIFTLFSSFSMASLALPGMSGFVAELVVFFGIITSEKFFLMPKILITFVTAIGMILTPIYSLSMLRQIFYGYKQFNVPNSHFFDSGPRELFVSICIFLPVIGIGIYPDFVFSLSVDKVEAILSNYF 498
BLAST of CV712684 vs. ExPASy Swiss-Prot
Match: NU4C_MORIN (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Morus indica GN=ndhD PE=3 SV=1) HSP 1 Score: 409.838 bits (1052), Expect = 7.715e-114 Identity = 205/237 (86.50%), Postives = 218/237 (91.98%), Query Frame = 2 Query: 2 IRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYGYKLFNAPNSYFFDSGPRELFVLISILLPVIGIGIYPDFVLSLSADKAEAIISNFF 712 +RINMELLPHAHSIFSPW MIVGT+QIIYAASTSPGQRNLKKRIAYSSVSHMGFII+G+GSI DTGLNGA+LQIISHG I AALFFLAGTSYDRIR YLDEMGG+AI IPKIFT FSILSMASLALPGMSGFVAELI+FFGI+TSQK+ LM KI+ITFVMAIGMILTPIYSLSMLRQMFYGYKLF A NSYF DSGPRE FV ISILLPVI IGIYPDFV SLS DK EA++SN+F Sbjct: 262 VRINMELLPHAHSIFSPWLMIVGTIQIIYAASTSPGQRNLKKRIAYSSVSHMGFIIIGLGSINDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGMAITIPKIFTTFSILSMASLALPGMSGFVAELILFFGILTSQKYLLMTKILITFVMAIGMILTPIYSLSMLRQMFYGYKLFTATNSYFVDSGPREFFVSISILLPVIAIGIYPDFVFSLSVDKVEALLSNYF 498
BLAST of CV712684 vs. ExPASy Swiss-Prot
Match: NU4C_CERDE (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Ceratophyllum demersum GN=ndhD PE=3 SV=1) HSP 1 Score: 409.068 bits (1050), Expect = 1.316e-113 Identity = 207/237 (87.34%), Postives = 218/237 (91.98%), Query Frame = 2 Query: 2 IRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYGYKLFNAPNSYFFDSGPRELFVLISILLPVIGIGIYPDFVLSLSADKAEAIISNFF 712 IRINMELLPHAHSIFSPW MIVGTVQIIYAASTS GQRNLKKRIAYSSVSHMGFII+GI SITDTGLNGAVLQIISHG I AALFFLAGTSYDRIR YLDEMGG+AIP+PKIFT+FS SMASLALPGMSGFVAELIVFFGIITS K+ LMPK++ITFVMAIG+ILTPIYSLSMLRQMFYGYKLFN PNSYF DSGPRELF+ I ILLPVIGIGIYPDFVLSL DK E I+SN+F Sbjct: 262 IRINMELLPHAHSIFSPWLMIVGTVQIIYAASTSFGQRNLKKRIAYSSVSHMGFIIIGICSITDTGLNGAVLQIISHGFIGAALFFLAGTSYDRIRIVYLDEMGGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELIVFFGIITSPKYLLMPKVLITFVMAIGIILTPIYSLSMLRQMFYGYKLFNVPNSYFVDSGPRELFISICILLPVIGIGIYPDFVLSLLGDKVEDILSNYF 498
BLAST of CV712684 vs. ExPASy Swiss-Prot
Match: NU4C_OENEH (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Oenothera elata subsp. hookeri GN=ndhD PE=2 SV=2) HSP 1 Score: 407.527 bits (1046), Expect = 3.829e-113 Identity = 201/242 (83.06%), Postives = 223/242 (92.15%), Query Frame = 2 Query: 2 IRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYGYKLFNAPNSYFFDSGPRELFVLISILLPVIGIGIYPDFVLSLSADKAEAIISNFFL*IVF 727 +RINMELLPHAH +FSP +IVG +QIIYAASTSPGQ NLKKRIAYSS+SHMGFII+GIGS++DTGLNGA+LQIISHG I AALFFLAGTSYDRIR YLDEMGG+AIP+PK+FT+ SILSMASLALPG+SGFVAEL+VFFGIITSQK+ LMPKI+I F+MAIGMILTPIYSLSMLRQMFYGYKLFN PN YFFDSGPRELFV IS+LLP+IGIGIYPDFVLSLS +K EAIIS+FF IVF Sbjct: 262 VRINMELLPHAHCLFSPGLIIVGAIQIIYAASTSPGQLNLKKRIAYSSISHMGFIIIGIGSLSDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLLYLDEMGGMAIPLPKLFTMLSILSMASLALPGLSGFVAELLVFFGIITSQKYLLMPKILIAFLMAIGMILTPIYSLSMLRQMFYGYKLFNVPNYYFFDSGPRELFVSISLLLPIIGIGIYPDFVLSLSVEKVEAIISHFFFSIVF 503
BLAST of CV712684 vs. ExPASy Swiss-Prot
Match: NU4C_CARPA (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Carica papaya GN=ndhD PE=3 SV=1) HSP 1 Score: 407.527 bits (1046), Expect = 3.829e-113 Identity = 204/237 (86.08%), Postives = 221/237 (93.25%), Query Frame = 2 Query: 2 IRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYGYKLFNAPNSYFFDSGPRELFVLISILLPVIGIGIYPDFVLSLSADKAEAIISNFF 712 +RINMELLPHAHS+FSPW ++VGT+QIIYAASTS GQRNLKKRIAYSSVSHMGFII+GIGSITD GLNGA+LQI+SHG I AALFFLAGTSYDRIR YLDEMGG+AI +PKIFT+FSILSMASLALPGMSGFVAELIVFFGIITSQK+FLM KI+ITFVMAIGMILTPIYSLSM RQMFYGYKL NA N FFDSGPRELFV ISILLPVIGIGIYPDF+LSLS+DK EAI+SN+F Sbjct: 262 VRINMELLPHAHSLFSPWLVVVGTMQIIYAASTSSGQRNLKKRIAYSSVSHMGFIIIGIGSITDPGLNGAILQIVSHGFIGAALFFLAGTSYDRIRLVYLDEMGGMAISMPKIFTMFSILSMASLALPGMSGFVAELIVFFGIITSQKYFLMAKILITFVMAIGMILTPIYSLSMSRQMFYGYKLINAQNFSFFDSGPRELFVSISILLPVIGIGIYPDFLLSLSSDKVEAILSNYF 498
BLAST of CV712684 vs. ExPASy Swiss-Prot
Match: NU4C_LIRTU (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Liriodendron tulipifera GN=ndhD PE=3 SV=1) HSP 1 Score: 405.986 bits (1042), Expect = 1.114e-112 Identity = 202/237 (85.23%), Postives = 216/237 (91.14%), Query Frame = 2 Query: 2 IRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYGYKLFNAPNSYFFDSGPRELFVLISILLPVIGIGIYPDFVLSLSADKAEAIISNFF 712 +RINMELLPHAHSIFSPW MIVGT+QIIYAASTS GQ NLKKRIAYSSVSHMGF I+GIGSITDTGLNGA+LQIISHG I AALFFLAGTSYDRIR YLDEMGG+AIP+PKIFT+FS SMASLALPGMSGFVAE +VF+GIITS K+ LMPKI+ITFVMAIGMILTPIYSLSM RQMFYGYKLFN PNSYF DSGPRELFV I I LPVIGIGIYPDFVLSLS DK EAI++N+F Sbjct: 262 VRINMELLPHAHSIFSPWLMIVGTIQIIYAASTSSGQSNLKKRIAYSSVSHMGFTIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGIAIPMPKIFTMFSSFSMASLALPGMSGFVAESVVFWGIITSPKYLLMPKILITFVMAIGMILTPIYSLSMSRQMFYGYKLFNVPNSYFLDSGPRELFVSICIFLPVIGIGIYPDFVLSLSVDKVEAILANYF 498
BLAST of CV712684 vs. ExPASy Swiss-Prot
Match: NU4C_GUIAB (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Guizotia abyssinica GN=ndhD PE=3 SV=1) HSP 1 Score: 404.06 bits (1037), Expect = 4.233e-112 Identity = 202/237 (85.23%), Postives = 217/237 (91.56%), Query Frame = 2 Query: 2 IRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYGYKLFNAPNSYFFDSGPRELFVLISILLPVIGIGIYPDFVLSLSADKAEAIISNFF 712 IRINMELLPHAHSIFSPW MIVGT+QIIYAASTS GQRNLKKRIAYSSVSHMGFI++GI SITDTGLNGA+LQIISHG I AALFFLAGTSYDRIR YLDEMGG+AIP+PKIFT+FS S++SLALPGMSGFVAE+IVF GIITSQK+ LMPKIVITFVMAIGMILTPIY LSM RQMFYGYKLFN PNS+ FDSGPRELFV ISI LPVIGIG+YPDFVLSLS DK E I+SN+F Sbjct: 262 IRINMELLPHAHSIFSPWLMIVGTIQIIYAASTSLGQRNLKKRIAYSSVSHMGFILIGIASITDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGVAIPMPKIFTMFSSFSISSLALPGMSGFVAEVIVFLGIITSQKYLLMPKIVITFVMAIGMILTPIYLLSMSRQMFYGYKLFNIPNSFVFDSGPRELFVSISIFLPVIGIGMYPDFVLSLSVDKVEGILSNYF 498
BLAST of CV712684 vs. ExPASy Swiss-Prot
Match: NU4C_OENPA (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Oenothera parviflora GN=ndhD PE=3 SV=1) HSP 1 Score: 403.675 bits (1036), Expect = 5.529e-112 Identity = 198/237 (83.54%), Postives = 220/237 (92.83%), Query Frame = 2 Query: 2 IRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYGYKLFNAPNSYFFDSGPRELFVLISILLPVIGIGIYPDFVLSLSADKAEAIISNFF 712 +RINMELLPHAH +FSP +IVG +QIIYAASTSPGQ NLKKRIAYSS+SHMGFII+GIGS++DTGLNGA+LQIISHG I AALFFLAGTSYDRIR YLDEMGG+AIP+PK+FT+ SILSMASLALPG+SGFVAEL+VFFGIITSQK+ LMPKI+I F+MAIGMILTPIYSLSMLRQMFYGYKLFN PN YFFDSGPRELFV IS+LLP+IGIGIYPDFVLSLS +K EAIIS+FF Sbjct: 262 VRINMELLPHAHCLFSPGLIIVGAIQIIYAASTSPGQLNLKKRIAYSSISHMGFIIIGIGSLSDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLLYLDEMGGMAIPLPKLFTMLSILSMASLALPGLSGFVAELLVFFGIITSQKYLLMPKILIAFLMAIGMILTPIYSLSMLRQMFYGYKLFNVPNYYFFDSGPRELFVSISLLLPIIGIGIYPDFVLSLSVEKVEAIISHFF 498
BLAST of CV712684 vs. ExPASy Swiss-Prot
Match: NU4C_OENGL (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Oenothera glazioviana GN=ndhD PE=3 SV=1) HSP 1 Score: 403.675 bits (1036), Expect = 5.529e-112 Identity = 198/237 (83.54%), Postives = 220/237 (92.83%), Query Frame = 2 Query: 2 IRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYGYKLFNAPNSYFFDSGPRELFVLISILLPVIGIGIYPDFVLSLSADKAEAIISNFF 712 +RINMELLPHAH +FSP +IVG +QIIYAASTSPGQ NLKKRIAYSS+SHMGFII+GIGS++DTGLNGA+LQIISHG I AALFFLAGTSYDRIR YLDEMGG+AIP+PK+FT+ SILSMASLALPG+SGFVAEL+VFFGIITSQK+ LMPKI+I F+MAIGMILTPIYSLSMLRQMFYGYKLFN PN YFFDSGPRELFV IS+LLP+IGIGIYPDFVLSLS +K EAIIS+FF Sbjct: 262 VRINMELLPHAHCLFSPGLIIVGAIQIIYAASTSPGQLNLKKRIAYSSISHMGFIIIGIGSLSDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLLYLDEMGGMAIPLPKLFTMLSILSMASLALPGLSGFVAELLVFFGIITSQKYLLMPKILIAFLMAIGMILTPIYSLSMLRQMFYGYKLFNVPNYYFFDSGPRELFVSISLLLPIIGIGIYPDFVLSLSVEKVEAIISHFF 498 The following BLAST results are available for this feature:
BLAST of CV712684 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 325
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712684 ID=CV712684; Name=CV712684; organism=Citrus sinensis; type=EST; length=746bpback to top |