CV712677

Overview
NameCV712677
Unique NameCV712677
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length836
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712677 vs. ExPASy Swiss-Prot
Match: OLEO3_MAIZE (Oleosin Zm-II OS=Zea mays GN=OLE18 PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.692e-22
Identity = 56/128 (43.75%), Postives = 77/128 (60.16%), Query Frame = -3
Query:  307 GPSASKVLAVLAMLPLGGTFLALAGVALTGTIIGLCVTTPLFIIFSXXXXXXXXXXXXXVTGFLTSGAFGLTALSSLSWVLSILRQKTGSVPEMADQAKKRVAGMADYVGQKTKEVGQDIQSKVHEAG 690
            GP+AS+ L V  + PLGG  L L+G+ALT +++GL V TP+F+IFS             V GFLTSGA GL  LSSL+ + +  RQ     P+  ++A++R+A  A   G KT + GQ IQ +  EAG
Sbjct:   43 GPTASQALTVATLFPLGGLLLVLSGLALTASVVGLAVATPVFLIFSPVLVPAALLIGTAVMGFLTSGALGLGGLSSLTCLANTARQAFQRTPDYVEEARRRMAEAAAQAGHKTAQAGQAIQGRAQEAG 170          
BLAST of CV712677 vs. ExPASy Swiss-Prot
Match: OLEO2_ORYSJ (Oleosin 18 kDa OS=Oryza sativa subsp. japonica GN=OLE18 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.210e-22
Identity = 65/173 (37.57%), Postives = 89/173 (51.45%), Query Frame = -3
Query:  295 MAERDRXXXXXXXXXXXXHGKSLMGQRGAAGG---------GPSASKVLAVLAMLPLGGTFLALAGVALTGTIIGLCVTTPLFIIFSXXXXXXXXXXXXXVTGFLTSGAFGLTALSSLSWVLSILRQKTGSVPEMADQAKKRVAGMADYVGQKTKEVGQDIQSKVHEAGGKTG 786
            MA+RDR             G+    QRG  G           PSAS+ L V  + PLGG  L L+G+AL  +++GL V TP+F+IFS             V GFLTSGA GL  LSSL+++ +  RQ     P+  +QA++R+A  A + G KT + G  IQ +  +AG   G
Sbjct:    1 MADRDRA------------GQYYQQQRGQVGETVKGILPEKAPSASQALTVATLFPLGGLLLVLSGLALAASVVGLAVATPVFLIFSPVLVPAALLIGLAVAGFLTSGALGLGGLSSLTFLANTARQAFQRTPDYVEQARRRMAEAAAHAGHKTAQAGHAIQGRADQAGTGAG 161          
BLAST of CV712677 vs. ExPASy Swiss-Prot
Match: OLEO2_ORYSI (Oleosin 18 kDa OS=Oryza sativa subsp. indica GN=OLE18 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.210e-22
Identity = 65/173 (37.57%), Postives = 89/173 (51.45%), Query Frame = -3
Query:  295 MAERDRXXXXXXXXXXXXHGKSLMGQRGAAGG---------GPSASKVLAVLAMLPLGGTFLALAGVALTGTIIGLCVTTPLFIIFSXXXXXXXXXXXXXVTGFLTSGAFGLTALSSLSWVLSILRQKTGSVPEMADQAKKRVAGMADYVGQKTKEVGQDIQSKVHEAGGKTG 786
            MA+RDR             G+    QRG  G           PSAS+ L V  + PLGG  L L+G+AL  +++GL V TP+F+IFS             V GFLTSGA GL  LSSL+++ +  RQ     P+  +QA++R+A  A + G KT + G  IQ +  +AG   G
Sbjct:    1 MADRDRA------------GQYYQQQRGQVGETVKGILPEKAPSASQALTVATLFPLGGLLLVLSGLALAASVVGLAVATPVFLIFSPVLVPAALLIGLAVAGFLTSGALGLGGLSSLTFLANTARQAFQRTPDYVEQARRRMAEAAAHAGHKTAQAGHAIQGRADQAGTGAG 161          
BLAST of CV712677 vs. ExPASy Swiss-Prot
Match: OLEO1_PRUDU (Oleosin 1 OS=Prunus dulcis GN=OLE1 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.875e-13
Identity = 39/117 (33.33%), Postives = 61/117 (52.14%), Query Frame = -3
Query:  337 PSASKVLAVLAMLPLGGTFLALAGVALTGTIIGLCVTTPLFIIFSXXXXXXXXXXXXXVTGFLTSGAFGLTALSSLSWVLSILRQKTGSVPEMADQAKKRVAGMADYVGQKTKEVGQ 687
            P + +V      +  GG+ L L+G+ L GT+I L + TPL +IFS               GFLTSG FG+ A++ LSW+   +  K     +  DQA+ ++AG A  +  + ++ GQ
Sbjct:   21 PRSYQVAKAATAVTAGGSLLVLSGLVLAGTVIALTIATPLLVIFSPVLVPALITVALITMGFLTSGGFGVAAVTVLSWIYKYVTGKQPPGADQLDQARHKLAGKARDIKDRAEQFGQ 137          
BLAST of CV712677 vs. ExPASy Swiss-Prot
Match: OLEO3_ARATH (Oleosin 14.9 kDa OS=Arabidopsis thaliana GN=OL3 PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 2.292e-11
Identity = 36/101 (35.64%), Postives = 55/101 (54.46%), Query Frame = -3
Query:  385 PSASKVLAVLAMLPLGGTFLALAGVALTGTIIGLCVTTPLFIIFSXXXXXXXXXXXXXVTGFLTSGAFGLTALSSLSWVLSILRQKTGSVPEMADQAKKRV 687
            P A +++     +  GG+ L L+G+ L GT+I L V TPL +IFS             +TGFL SG FG+ A+++ SW   + R  TGS  +  + A+ +V
Sbjct:   22 PKARQMVKAATAVTAGGSLLVLSGLTLAGTVIALTVATPLLVIFSPVLVPAVVTVALIITGFLASGGFGIAAITAFSW---LYRHMTGSGSDKIENARMKV 119          
BLAST of CV712677 vs. ExPASy Swiss-Prot
Match: OLEO1_MAIZE (Oleosin Zm-I OS=Zea mays GN=OLE16 PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 6.670e-11
Identity = 39/113 (34.51%), Postives = 55/113 (48.67%), Query Frame = -3
Query:  304 GGTFLALAGVALTGTIIGLCVTTPLFIIFSXXXXXXXXXXXXXVTGFLTSGAFGLTALSSLSWVLSILRQKTGSVPEMADQAKKRVAGMADYVGQKTKEVGQDIQSKVHEAGG 642
            GG+ L L+G+ L GT+I L V TP+ +IFS               GF+TSG  G+ ALS  SW+   L  K     +  D AK R+A        K ++V    Q ++ +A G
Sbjct:   50 GGSMLVLSGLILAGTVIALTVATPVLVIFSPVLVPAAIALALMAAGFVTSGGLGVAALSVFSWMYKYLTGKHPPAADQLDHAKARLA-------SKARDVKDAAQHRIDQAQG 155          
The following BLAST results are available for this feature:
BLAST of CV712677 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
OLEO3_MAIZE1.692e-2243.75Oleosin Zm-II OS=Zea mays GN=OLE18 PE=1 SV=1[more]
OLEO2_ORYSJ2.210e-2237.57Oleosin 18 kDa OS=Oryza sativa subsp. japonica GN=... [more]
OLEO2_ORYSI2.210e-2237.57Oleosin 18 kDa OS=Oryza sativa subsp. indica GN=OL... [more]
OLEO1_PRUDU1.875e-1333.33Oleosin 1 OS=Prunus dulcis GN=OLE1 PE=2 SV=1[more]
OLEO3_ARATH2.292e-1135.64Oleosin 14.9 kDa OS=Arabidopsis thaliana GN=OL3 PE... [more]
OLEO1_MAIZE6.670e-1134.51Oleosin Zm-I OS=Zea mays GN=OLE16 PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001L23_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001L23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712677 ID=CV712677; Name=CV712677; organism=Citrus sinensis; type=EST; length=836bp
ATTTCGAACTAAATTTAGCAAATGGGAAGATACAAGACAACAACTGAGAC
AATACATAGCATATTCAAATTCTAGATAATTAAACCCAAAAACAAAAGCA
CCAAATGCCTTGCATTCCAAGTAAGCCCAAGAGCCAAACCCTTGCACCTC
ACAAGCCACAACAGAGTACGGACTCTCCTACAACTAAATACACAAAACTT
ATTACAACTACAAAACCAACACTAAAGCCCTAAAAAGAAACCACACATTG
TCTTCCCCATCAACCGATCATATCAGATCAACATTTTATGTCCTCCCCGT
CTTCCCTCCTGCTTCATGAACCTTACTCTGAATATCCTGCCCAACTTCCT
TAGTCTTCTGGCCCACATAATCCGCCATTCCCGCCACCCGCTTCTTCGCC
TGGTCCGCCATCTCCGGCACCGACCCAGTCTTCTGCCGCAATATGCTCAG
GACCCACGAGAGCGAAGACAAGGCCGTCAGCCCGAAAGCCCCCGACGTTA
AAAACCCAGTCACTGCAAGAGCAAGAACAATGGCGGCGGGGACAATAACG
GGGCTGAAGATTATGAAGAGAGGAGTGGTGACGCAAAGCCCGATGATGGT
TCCAGTCAGCGCGACACCGGCAAGAGCAAGAAAGGTTCCACCGAGGGGCA
GCATGGCCAAAACTGCAAGAACTTTGCTTGCTGAAGGGCCTCCTCCTGCT
GCTCCTCTTTGGCCCATAAGAGACTTACCGTGCTGTTGTGGGTGCACTTG
AAGCTGGTGTGGCTGCGGGCGATCGCGTTCAGCCATTGAGATGCTTAATT
CAAGAGTAAAGAGAGAAATATCGAGCAGTAAATCCT
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