CV712676

Overview
NameCV712676
Unique NameCV712676
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length632
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CV712676_ssr590 microsatellite CV712676_ssr590:590..601. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig9428 contig Csv1_Contig9428:613..1244. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV712676 vs. ExPASy Swiss-Prot
Match: 1433Z_SHEEP (14-3-3 protein zeta/delta OS=Ovis aries GN=YWHAZ PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 6.438e-33
Identity = 70/86 (81.40%), Postives = 77/86 (89.53%), Query Frame = 3
Query:   18 AEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDEAQ 275
            ++ E+ PTHPIRLGLALNFSVFYYEI+NSPE+AC LAK AFDEAI+ELDTLSEESYKDSTLIMQLLRDNLTLWTSD     GDEA+
Sbjct:  156 SKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQ---GDEAE 238          
BLAST of CV712676 vs. ExPASy Swiss-Prot
Match: 1433Z_RAT (14-3-3 protein zeta/delta OS=Rattus norvegicus GN=Ywhaz PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 6.438e-33
Identity = 70/86 (81.40%), Postives = 77/86 (89.53%), Query Frame = 3
Query:   18 AEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDEAQ 275
            ++ E+ PTHPIRLGLALNFSVFYYEI+NSPE+AC LAK AFDEAI+ELDTLSEESYKDSTLIMQLLRDNLTLWTSD     GDEA+
Sbjct:  156 SKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQ---GDEAE 238          
BLAST of CV712676 vs. ExPASy Swiss-Prot
Match: 1433Z_PONAB (14-3-3 protein zeta/delta OS=Pongo abelii GN=YWHAZ PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 6.438e-33
Identity = 70/86 (81.40%), Postives = 77/86 (89.53%), Query Frame = 3
Query:   18 AEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDEAQ 275
            ++ E+ PTHPIRLGLALNFSVFYYEI+NSPE+AC LAK AFDEAI+ELDTLSEESYKDSTLIMQLLRDNLTLWTSD     GDEA+
Sbjct:  156 SKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQ---GDEAE 238          
BLAST of CV712676 vs. ExPASy Swiss-Prot
Match: 1433Z_MOUSE (14-3-3 protein zeta/delta OS=Mus musculus GN=Ywhaz PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 6.438e-33
Identity = 70/86 (81.40%), Postives = 77/86 (89.53%), Query Frame = 3
Query:   18 AEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDEAQ 275
            ++ E+ PTHPIRLGLALNFSVFYYEI+NSPE+AC LAK AFDEAI+ELDTLSEESYKDSTLIMQLLRDNLTLWTSD     GDEA+
Sbjct:  156 SKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQ---GDEAE 238          
BLAST of CV712676 vs. ExPASy Swiss-Prot
Match: 1433Z_HUMAN (14-3-3 protein zeta/delta OS=Homo sapiens GN=YWHAZ PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 6.438e-33
Identity = 70/86 (81.40%), Postives = 77/86 (89.53%), Query Frame = 3
Query:   18 AEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDEAQ 275
            ++ E+ PTHPIRLGLALNFSVFYYEI+NSPE+AC LAK AFDEAI+ELDTLSEESYKDSTLIMQLLRDNLTLWTSD     GDEA+
Sbjct:  156 SKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQ---GDEAE 238          
BLAST of CV712676 vs. ExPASy Swiss-Prot
Match: 1433Z_CHICK (14-3-3 protein zeta OS=Gallus gallus GN=YWHAZ PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 6.438e-33
Identity = 70/86 (81.40%), Postives = 77/86 (89.53%), Query Frame = 3
Query:   18 AEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDEAQ 275
            ++ E+ PTHPIRLGLALNFSVFYYEI+NSPE+AC LAK AFDEAI+ELDTLSEESYKDSTLIMQLLRDNLTLWTSD     GDEA+
Sbjct:  156 SKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQ---GDEAE 238          
BLAST of CV712676 vs. ExPASy Swiss-Prot
Match: 1433Z_BOVIN (14-3-3 protein zeta/delta OS=Bos taurus GN=YWHAZ PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 6.438e-33
Identity = 70/86 (81.40%), Postives = 77/86 (89.53%), Query Frame = 3
Query:   18 AEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDEAQ 275
            ++ E+ PTHPIRLGLALNFSVFYYEI+NSPE+AC LAK AFDEAI+ELDTLSEESYKDSTLIMQLLRDNLTLWTSD     GDEA+
Sbjct:  156 SKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQ---GDEAE 238          
BLAST of CV712676 vs. ExPASy Swiss-Prot
Match: 1433E_DROME (14-3-3 protein epsilon OS=Drosophila melanogaster GN=14-3-3epsilon PE=1 SV=2)

HSP 1 Score: 140.584 bits (353), Expect = 6.438e-33
Identity = 70/88 (79.55%), Postives = 77/88 (87.50%), Query Frame = 3
Query:    3 AASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGD 266
            AAS  A  +L PTHPIRLGLALNFSVFYYEI+NSP+RAC LAK AFD+AI+ELDTLSEESYKDSTLIMQLLRDNLTLWTSD+  +  D
Sbjct:  154 AASDIAMNDLPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDMQAEEVD 241          
BLAST of CV712676 vs. ExPASy Swiss-Prot
Match: 14332_SCHMA (14-3-3 protein homolog 2 (Fragment) OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 6.438e-33
Identity = 67/84 (79.76%), Postives = 78/84 (92.86%), Query Frame = 3
Query:   18 AEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDE 269
            A+ ++ PTHPIRLGLALNFSVFYYEI+N+P+RACHLAKQAFD+AI+ELDTL+E+SYKDSTLIMQLLRDNLTLWTSD    GGD+
Sbjct:  125 AKNQMQPTHPIRLGLALNFSVFYYEILNAPDRACHLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSD---TGGDD 205          
BLAST of CV712676 vs. ExPASy Swiss-Prot
Match: RAD25_SCHPO (DNA damage checkpoint protein rad25 OS=Schizosaccharomyces pombe GN=rad25 PE=1 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 8.409e-33
Identity = 70/81 (86.42%), Postives = 74/81 (91.36%), Query Frame = 3
Query:    3 AASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSD 245
            AAS  A AEL PT P+RLGLALNFSVFYYEI++SPE ACHLAKQ FDEAISELD+LSEESYKDSTLIMQLLRDNLTLWTSD
Sbjct:  155 AASDIAVAELPPTDPMRLGLALNFSVFYYEILDSPESACHLAKQVFDEAISELDSLSEESYKDSTLIMQLLRDNLTLWTSD 235          
The following BLAST results are available for this feature:
BLAST of CV712676 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
1433Z_SHEEP6.438e-3381.4014-3-3 protein zeta/delta OS=Ovis aries GN=YWHAZ P... [more]
1433Z_RAT6.438e-3381.4014-3-3 protein zeta/delta OS=Rattus norvegicus GN=... [more]
1433Z_PONAB6.438e-3381.4014-3-3 protein zeta/delta OS=Pongo abelii GN=YWHAZ... [more]
1433Z_MOUSE6.438e-3381.4014-3-3 protein zeta/delta OS=Mus musculus GN=Ywhaz... [more]
1433Z_HUMAN6.438e-3381.4014-3-3 protein zeta/delta OS=Homo sapiens GN=YWHAZ... [more]
1433Z_CHICK6.438e-3381.4014-3-3 protein zeta OS=Gallus gallus GN=YWHAZ PE=2... [more]
1433Z_BOVIN6.438e-3381.4014-3-3 protein zeta/delta OS=Bos taurus GN=YWHAZ P... [more]
1433E_DROME6.438e-3379.5514-3-3 protein epsilon OS=Drosophila melanogaster ... [more]
14332_SCHMA6.438e-3379.7614-3-3 protein homolog 2 (Fragment) OS=Schistosoma... [more]
RAD25_SCHPO8.409e-3386.42DNA damage checkpoint protein rad25 OS=Schizosacch... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001L22_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001L22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712676 ID=CV712676; Name=CV712676; organism=Citrus sinensis; type=EST; length=632bp
AGGCAGCTTCTACTACCGCAGAAGCTGAATTGTCTCCTACCCACCCCATC
CGACTTGGTTTGGCCTTGAACTTCTCAGTTTTTTACTATGAGATTATGAA
CTCTCCTGAAAGGGCATGCCACCTTGCAAAGCAGGCCTTTGATGAAGCCA
TCTCAGAATTGGATACATTAAGTGAGGAATCTTACAAAGACAGCACGTTG
ATAATGCAGCTATTGAGGGACAACCTCACTCTTTGGACTTCTGACATACC
AGAGGATGGAGGTGATGAAGCCCAGAAAATGGACATCTCTGCTAAAGAGG
GTGAAGGTGAAGATTGAAGAAGCAGAGGTGGGTTTGTTTTCCTATTTTGG
AGCAGAGTTGCAATCTTTGTTGTTTTCTGTCCTCAGTGAACCAGCCAGGA
GCTTGGGAGCTCTAGCATATGATAGCAAGGAAGCTGCAATACCTTTATGA
CTCCCGGTGTTTTTCTTAGTTTACAAGAGACACTCAAGTACTGTTATTGT
GCTGTTCCTATAATGTGGGTGTTATCTTCACTGTCAAGAGTTTCATGATT
GGACTGCTTGTATCATTTGCATCCCAGAATCTTTTATATCTGCTGCTGCT
GATCAATTTGGACTTAGTGTTAAGACCAAAAA
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