CV712676

Overview
NameCV712676
Unique NameCV712676
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length632
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CV712676_ssr590 microsatellite CV712676_ssr590:590..601. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig9428 contig Csv1_Contig9428:613..1244. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV712676 vs. ExPASy Swiss-Prot
Match: 1433B_HUMAN (14-3-3 protein beta/alpha OS=Homo sapiens GN=YWHAB PE=1 SV=3)

HSP 1 Score: 139.428 bits (350), Expect = 1.434e-32
Identity = 67/86 (77.91%), Postives = 76/86 (88.37%), Query Frame = 3
Query:   18 AEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDEAQ 275
            ++ E+ PTHPIRLGLALNFSVFYYEI+NSPE+AC LAK AFDEAI+ELDTL+EESYKDSTLIMQLLRDNLTLWTS+   D GD  +
Sbjct:  158 SKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEGDAGE 243          
BLAST of CV712676 vs. ExPASy Swiss-Prot
Match: 1433B_BOVIN (14-3-3 protein beta/alpha OS=Bos taurus GN=YWHAB PE=1 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 1.434e-32
Identity = 67/86 (77.91%), Postives = 76/86 (88.37%), Query Frame = 3
Query:   18 AEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDEAQ 275
            ++ E+ PTHPIRLGLALNFSVFYYEI+NSPE+AC LAK AFDEAI+ELDTL+EESYKDSTLIMQLLRDNLTLWTS+   D GD  +
Sbjct:  158 SKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEGDAGE 243          
BLAST of CV712676 vs. ExPASy Swiss-Prot
Match: 1433Z_DROME (14-3-3 protein zeta OS=Drosophila melanogaster GN=14-3-3zeta PE=1 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 1.873e-32
Identity = 66/89 (74.16%), Postives = 79/89 (88.76%), Query Frame = 3
Query:   18 AEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDI------PEDGGD 266
            ++ ++ PTHPIRLGLALNFSVFYYEI+NSP++AC LAKQAFD+AI+ELDTL+E+SYKDSTLIMQLLRDNLTLWTSD       P++GGD
Sbjct:  159 SKGKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDTQGDEAEPQEGGD 247          
BLAST of CV712676 vs. ExPASy Swiss-Prot
Match: 1433E_TOBAC (14-3-3-like protein E OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 1.873e-32
Identity = 68/81 (83.95%), Postives = 75/81 (92.59%), Query Frame = 3
Query:    3 AASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSD 245
            +A   A AEL+PTHPIRLGLALNFSVFYYEI+NS +RAC+LAKQAFD+AI+ELDTL EESYKDSTLIMQLLRDNLTLWTSD
Sbjct:  158 SAQDIALAELAPTHPIRLGLALNFSVFYYEILNSSDRACNLAKQAFDDAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSD 238          
BLAST of CV712676 vs. ExPASy Swiss-Prot
Match: 1433_XENLA (14-3-3-like protein (Fragment) OS=Xenopus laevis PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.447e-32
Identity = 68/89 (76.40%), Postives = 79/89 (88.76%), Query Frame = 3
Query:   18 AEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDEAQKMD 284
            +++E+ PTHPIRLGLALNFSVFYYEI+NSPE+AC LAK AFDEAI ELDTL+EESYKDSTLIMQLLRDNLTLWTS   E+ G+EA  ++
Sbjct:  147 SKSEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKSAFDEAIRELDTLNEESYKDSTLIMQLLRDNLTLWTS---ENQGEEADNVE 232          
BLAST of CV712676 vs. ExPASy Swiss-Prot
Match: 1433B_XENTR (14-3-3 protein beta/alpha OS=Xenopus tropicalis GN=ywhab PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.447e-32
Identity = 66/86 (76.74%), Postives = 77/86 (89.53%), Query Frame = 3
Query:   18 AEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDEAQ 275
            +++E+ PTHPIRLGLALNFSVFYYEI+NSPE+AC LAK AFDEAI+ELDTL+EESYKDSTLIMQLLRDNLTLWTS+   +  D A+
Sbjct:  156 SKSEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKSAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGEEADNAE 241          
BLAST of CV712676 vs. ExPASy Swiss-Prot
Match: 14336_ARATH (14-3-3-like protein GF14 lambda OS=Arabidopsis thaliana GN=GRF6 PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.447e-32
Identity = 66/84 (78.57%), Postives = 77/84 (91.67%), Query Frame = 3
Query:    3 AASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPE 254
            AA   A A+++PTHPIRLGLALNFSVFYYEI+NS ++AC++AKQAF+EAI+ELDTL EESYKDSTLIMQLLRDNLTLWTSD+ E
Sbjct:  160 AAQDIAAADMAPTHPIRLGLALNFSVFYYEILNSSDKACNMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQE 243          
BLAST of CV712676 vs. ExPASy Swiss-Prot
Match: 14331_SOLLC (14-3-3 protein 1 OS=Solanum lycopersicum GN=TFT1 PE=3 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 2.447e-32
Identity = 67/84 (79.76%), Postives = 76/84 (90.48%), Query Frame = 3
Query:    3 AASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPE 254
            AA   A AEL+PTHPIRLGLALNFSVFYYEI+N+ E+AC +AKQAF+EAI+ELDT+ EESYKDSTLIMQLLRDNLTLWTSD+ E
Sbjct:  161 AAQDIAVAELAPTHPIRLGLALNFSVFYYEILNASEKACSMAKQAFEEAIAELDTMGEESYKDSTLIMQLLRDNLTLWTSDMQE 244          
BLAST of CV712676 vs. ExPASy Swiss-Prot
Match: 143GB_XENLA (14-3-3 protein gamma-B OS=Xenopus laevis GN=ywhag-B PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 4.173e-32
Identity = 65/88 (73.86%), Postives = 76/88 (86.36%), Query Frame = 3
Query:    6 ASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDE 269
            A   ++  + PTHPIRLGLALN+SVFYYEI N+PE+ACHLAK AFD+AI+ELDTL+E+SYKDSTLIMQLLRDNLTLWTSD  +D G E
Sbjct:  157 AHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDDDGGE 244          
BLAST of CV712676 vs. ExPASy Swiss-Prot
Match: 143GA_XENLA (14-3-3 protein gamma-A OS=Xenopus laevis GN=ywhag-A PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 4.173e-32
Identity = 65/88 (73.86%), Postives = 76/88 (86.36%), Query Frame = 3
Query:    6 ASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDE 269
            A   ++  + PTHPIRLGLALN+SVFYYEI N+PE+ACHLAK AFD+AI+ELDTL+E+SYKDSTLIMQLLRDNLTLWTSD  +D G E
Sbjct:  157 AHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDDDGGE 244          
The following BLAST results are available for this feature:
BLAST of CV712676 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
1433B_HUMAN1.434e-3277.9114-3-3 protein beta/alpha OS=Homo sapiens GN=YWHAB... [more]
1433B_BOVIN1.434e-3277.9114-3-3 protein beta/alpha OS=Bos taurus GN=YWHAB P... [more]
1433Z_DROME1.873e-3274.1614-3-3 protein zeta OS=Drosophila melanogaster GN=... [more]
1433E_TOBAC1.873e-3283.9514-3-3-like protein E OS=Nicotiana tabacum PE=2 SV... [more]
1433_XENLA2.447e-3276.4014-3-3-like protein (Fragment) OS=Xenopus laevis P... [more]
1433B_XENTR2.447e-3276.7414-3-3 protein beta/alpha OS=Xenopus tropicalis GN... [more]
14336_ARATH2.447e-3278.5714-3-3-like protein GF14 lambda OS=Arabidopsis tha... [more]
14331_SOLLC2.447e-3279.7614-3-3 protein 1 OS=Solanum lycopersicum GN=TFT1 P... [more]
143GB_XENLA4.173e-3273.8614-3-3 protein gamma-B OS=Xenopus laevis GN=ywhag-... [more]
143GA_XENLA4.173e-3273.8614-3-3 protein gamma-A OS=Xenopus laevis GN=ywhag-... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001L22_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001L22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712676 ID=CV712676; Name=CV712676; organism=Citrus sinensis; type=EST; length=632bp
AGGCAGCTTCTACTACCGCAGAAGCTGAATTGTCTCCTACCCACCCCATC
CGACTTGGTTTGGCCTTGAACTTCTCAGTTTTTTACTATGAGATTATGAA
CTCTCCTGAAAGGGCATGCCACCTTGCAAAGCAGGCCTTTGATGAAGCCA
TCTCAGAATTGGATACATTAAGTGAGGAATCTTACAAAGACAGCACGTTG
ATAATGCAGCTATTGAGGGACAACCTCACTCTTTGGACTTCTGACATACC
AGAGGATGGAGGTGATGAAGCCCAGAAAATGGACATCTCTGCTAAAGAGG
GTGAAGGTGAAGATTGAAGAAGCAGAGGTGGGTTTGTTTTCCTATTTTGG
AGCAGAGTTGCAATCTTTGTTGTTTTCTGTCCTCAGTGAACCAGCCAGGA
GCTTGGGAGCTCTAGCATATGATAGCAAGGAAGCTGCAATACCTTTATGA
CTCCCGGTGTTTTTCTTAGTTTACAAGAGACACTCAAGTACTGTTATTGT
GCTGTTCCTATAATGTGGGTGTTATCTTCACTGTCAAGAGTTTCATGATT
GGACTGCTTGTATCATTTGCATCCCAGAATCTTTTATATCTGCTGCTGCT
GATCAATTTGGACTTAGTGTTAAGACCAAAAA
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