CV712676

Overview
NameCV712676
Unique NameCV712676
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length632
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CV712676_ssr590 microsatellite CV712676_ssr590:590..601. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig9428 contig Csv1_Contig9428:613..1244. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV712676 vs. ExPASy Swiss-Prot
Match: 143G2_ONCMY (14-3-3 protein gamma-2 OS=Oncorhynchus mykiss PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 4.173e-32
Identity = 65/91 (71.43%), Postives = 77/91 (84.62%), Query Frame = 3
Query:    6 ASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDEAQK 278
            A   ++  + PTHPIRLGLALN+SVFYYEI N+PE+ACHLAK AFD+AI+ELDTL+E+SY+DSTLIMQLLRDNLTLWTSD  +D G E  K
Sbjct:  157 AHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYQDSTLIMQLLRDNLTLWTSDQQDDEGGEGNK 247          
BLAST of CV712676 vs. ExPASy Swiss-Prot
Match: 1433Z_XENLA (14-3-3 protein zeta OS=Xenopus laevis GN=ywhaz PE=2 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 4.173e-32
Identity = 68/87 (78.16%), Postives = 77/87 (88.51%), Query Frame = 3
Query:   18 AEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDEAQK 278
            ++ E+ PTHPIRLGLALNFSVFYYEI+N P++AC LAK AFDEAI+ELDTLSEESYKDSTLIMQLLRDNLTLWTSD     GDEA++
Sbjct:  156 SKTEMQPTHPIRLGLALNFSVFYYEILNCPDKACALAKAAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQ---GDEAEQ 239          
BLAST of CV712676 vs. ExPASy Swiss-Prot
Match: 1433G_RAT (14-3-3 protein gamma OS=Rattus norvegicus GN=Ywhag PE=1 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 4.173e-32
Identity = 65/88 (73.86%), Postives = 76/88 (86.36%), Query Frame = 3
Query:    6 ASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDE 269
            A   ++  + PTHPIRLGLALN+SVFYYEI N+PE+ACHLAK AFD+AI+ELDTL+E+SYKDSTLIMQLLRDNLTLWTSD  +D G E
Sbjct:  157 AHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDDDGGE 244          
BLAST of CV712676 vs. ExPASy Swiss-Prot
Match: 1433G_PONAB (14-3-3 protein gamma OS=Pongo abelii GN=YWHAG PE=2 SV=3)

HSP 1 Score: 137.887 bits (346), Expect = 4.173e-32
Identity = 65/88 (73.86%), Postives = 76/88 (86.36%), Query Frame = 3
Query:    6 ASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDE 269
            A   ++  + PTHPIRLGLALN+SVFYYEI N+PE+ACHLAK AFD+AI+ELDTL+E+SYKDSTLIMQLLRDNLTLWTSD  +D G E
Sbjct:  157 AHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDDDGGE 244          
BLAST of CV712676 vs. ExPASy Swiss-Prot
Match: 1433G_MOUSE (14-3-3 protein gamma OS=Mus musculus GN=Ywhag PE=1 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 4.173e-32
Identity = 65/88 (73.86%), Postives = 76/88 (86.36%), Query Frame = 3
Query:    6 ASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDE 269
            A   ++  + PTHPIRLGLALN+SVFYYEI N+PE+ACHLAK AFD+AI+ELDTL+E+SYKDSTLIMQLLRDNLTLWTSD  +D G E
Sbjct:  157 AHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDDDGGE 244          
BLAST of CV712676 vs. ExPASy Swiss-Prot
Match: 1433G_HUMAN (14-3-3 protein gamma OS=Homo sapiens GN=YWHAG PE=1 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 4.173e-32
Identity = 65/88 (73.86%), Postives = 76/88 (86.36%), Query Frame = 3
Query:    6 ASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDE 269
            A   ++  + PTHPIRLGLALN+SVFYYEI N+PE+ACHLAK AFD+AI+ELDTL+E+SYKDSTLIMQLLRDNLTLWTSD  +D G E
Sbjct:  157 AHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDDDGGE 244          
BLAST of CV712676 vs. ExPASy Swiss-Prot
Match: 1433G_CHICK (14-3-3 protein gamma OS=Gallus gallus GN=YWHAG PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 4.173e-32
Identity = 65/88 (73.86%), Postives = 76/88 (86.36%), Query Frame = 3
Query:    6 ASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDE 269
            A   ++  + PTHPIRLGLALN+SVFYYEI N+PE+ACHLAK AFD+AI+ELDTL+E+SYKDSTLIMQLLRDNLTLWTSD  +D G E
Sbjct:  157 AHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDDDGGE 244          
BLAST of CV712676 vs. ExPASy Swiss-Prot
Match: 1433G_BOVIN (14-3-3 protein gamma OS=Bos taurus GN=YWHAG PE=1 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 4.173e-32
Identity = 65/88 (73.86%), Postives = 76/88 (86.36%), Query Frame = 3
Query:    6 ASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDE 269
            A   ++  + PTHPIRLGLALN+SVFYYEI N+PE+ACHLAK AFD+AI+ELDTL+E+SYKDSTLIMQLLRDNLTLWTSD  +D G E
Sbjct:  157 AHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDDDGGE 244          
BLAST of CV712676 vs. ExPASy Swiss-Prot
Match: 1433D_TOBAC (14-3-3-like protein D OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 4.173e-32
Identity = 67/84 (79.76%), Postives = 76/84 (90.48%), Query Frame = 3
Query:    3 AASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPE 254
            AA   A AEL+PTHPIRLGLALN+SVFYYEI+N+ E+AC +AKQAF+EAI+ELDTL EESYKDSTLIMQLLRDNLTLWTSD+ E
Sbjct:  161 AAQDIALAELAPTHPIRLGLALNYSVFYYEILNASEKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQE 244          
BLAST of CV712676 vs. ExPASy Swiss-Prot
Match: 143G1_ONCMY (14-3-3 protein gamma-1 OS=Oncorhynchus mykiss PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 5.450e-32
Identity = 65/88 (73.86%), Postives = 76/88 (86.36%), Query Frame = 3
Query:    6 ASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDE 269
            A   ++  + PTHPIRLGLALN+SVFYYEI N+PE+ACHLAK AFD+AI+ELDTL+E+SYKDSTLIMQLLRDNLTLWTSD  +D G E
Sbjct:  157 AHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQZDDEGGE 244          
The following BLAST results are available for this feature:
BLAST of CV712676 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
143G2_ONCMY4.173e-3271.4314-3-3 protein gamma-2 OS=Oncorhynchus mykiss PE=2... [more]
1433Z_XENLA4.173e-3278.1614-3-3 protein zeta OS=Xenopus laevis GN=ywhaz PE=... [more]
1433G_RAT4.173e-3273.8614-3-3 protein gamma OS=Rattus norvegicus GN=Ywhag... [more]
1433G_PONAB4.173e-3273.8614-3-3 protein gamma OS=Pongo abelii GN=YWHAG PE=2... [more]
1433G_MOUSE4.173e-3273.8614-3-3 protein gamma OS=Mus musculus GN=Ywhag PE=1... [more]
1433G_HUMAN4.173e-3273.8614-3-3 protein gamma OS=Homo sapiens GN=YWHAG PE=1... [more]
1433G_CHICK4.173e-3273.8614-3-3 protein gamma OS=Gallus gallus GN=YWHAG PE=... [more]
1433G_BOVIN4.173e-3273.8614-3-3 protein gamma OS=Bos taurus GN=YWHAG PE=1 S... [more]
1433D_TOBAC4.173e-3279.7614-3-3-like protein D OS=Nicotiana tabacum PE=2 SV... [more]
143G1_ONCMY5.450e-3273.8614-3-3 protein gamma-1 OS=Oncorhynchus mykiss PE=2... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001L22_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001L22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712676 ID=CV712676; Name=CV712676; organism=Citrus sinensis; type=EST; length=632bp
AGGCAGCTTCTACTACCGCAGAAGCTGAATTGTCTCCTACCCACCCCATC
CGACTTGGTTTGGCCTTGAACTTCTCAGTTTTTTACTATGAGATTATGAA
CTCTCCTGAAAGGGCATGCCACCTTGCAAAGCAGGCCTTTGATGAAGCCA
TCTCAGAATTGGATACATTAAGTGAGGAATCTTACAAAGACAGCACGTTG
ATAATGCAGCTATTGAGGGACAACCTCACTCTTTGGACTTCTGACATACC
AGAGGATGGAGGTGATGAAGCCCAGAAAATGGACATCTCTGCTAAAGAGG
GTGAAGGTGAAGATTGAAGAAGCAGAGGTGGGTTTGTTTTCCTATTTTGG
AGCAGAGTTGCAATCTTTGTTGTTTTCTGTCCTCAGTGAACCAGCCAGGA
GCTTGGGAGCTCTAGCATATGATAGCAAGGAAGCTGCAATACCTTTATGA
CTCCCGGTGTTTTTCTTAGTTTACAAGAGACACTCAAGTACTGTTATTGT
GCTGTTCCTATAATGTGGGTGTTATCTTCACTGTCAAGAGTTTCATGATT
GGACTGCTTGTATCATTTGCATCCCAGAATCTTTTATATCTGCTGCTGCT
GATCAATTTGGACTTAGTGTTAAGACCAAAAA
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