CV712675

Overview
NameCV712675
Unique NameCV712675
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length641
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CV712675_ssr38 microsatellite CV712675_ssr38:38..49. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig9428 contig Csv1_Contig9428:610..1250. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV712675 vs. ExPASy Swiss-Prot
Match: 1433_OENEH (14-3-3-like protein OS=Oenothera elata subsp. hookeri PE=2 SV=2)

HSP 1 Score: 147.517 bits (371), Expect = 5.428e-35
Identity = 69/83 (83.13%), Postives = 79/83 (95.18%), Query Frame = -3
Query:  361 LSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDEAQK 609
            L+PTHPIRLGLALNFSVFYYEI+NSP+RAC+LA +AFDEAI+ELDTL EESYKDSTLIMQLLRDNLTLWTSD+ +DGGDE ++
Sbjct:  169 LAPTHPIRLGLALNFSVFYYEILNSPDRACNLANEAFDEAIAELDTLEEESYKDSTLIMQLLRDNLTLWTSDMQDDGGDEIKE 251          
BLAST of CV712675 vs. ExPASy Swiss-Prot
Match: 14336_SOLLC (14-3-3 protein 6 OS=Solanum lycopersicum GN=TFT6 PE=2 SV=2)

HSP 1 Score: 147.517 bits (371), Expect = 5.428e-35
Identity = 70/83 (84.34%), Postives = 79/83 (95.18%), Query Frame = -3
Query:  361 LSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDEAQK 609
            L+PTHPIRLGLALNFSVFYYEI+NSP+RAC+LAKQAFDEAI+ELDTL EESYKDSTLIMQLLRDNLTLWTSD+ +DG DE ++
Sbjct:  167 LAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGTDEIKE 249          
BLAST of CV712675 vs. ExPASy Swiss-Prot
Match: 14335_SOLTU (14-3-3-like protein 16R OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 5.428e-35
Identity = 70/83 (84.34%), Postives = 79/83 (95.18%), Query Frame = -3
Query:  361 LSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDEAQK 609
            L+PTHPIRLGLALNFSVFYYEI+NSP+RAC+LAKQAFDEAI+ELDTL EESYKDSTLIMQLLRDNLTLWTSD+ +DG DE ++
Sbjct:  167 LAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGTDEIKE 249          
BLAST of CV712675 vs. ExPASy Swiss-Prot
Match: 14335_SOLLC (14-3-3 protein 5 OS=Solanum lycopersicum GN=TFT5 PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 5.428e-35
Identity = 70/83 (84.34%), Postives = 79/83 (95.18%), Query Frame = -3
Query:  361 LSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDEAQK 609
            L+PTHPIRLGLALNFSVFYYEI+NSP+RAC+LAKQAFDEAI+ELDTL EESYKDSTLIMQLLRDNLTLWTSD+ +DG DE ++
Sbjct:  166 LAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGTDEIKE 248          
BLAST of CV712675 vs. ExPASy Swiss-Prot
Match: 1433_TOBAC (14-3-3-like protein OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 7.089e-35
Identity = 73/86 (84.88%), Postives = 78/86 (90.70%), Query Frame = -3
Query:  364 LSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDG----GDEAQ 609
            L+PTHPIRLGLALNFSVFYYEI+NSPERACHLAKQAFDEAI+ELD+LSEESYKDSTLIMQLLRDN TLWTSD+ E G    GDE Q
Sbjct:  163 LAPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKDSTLIMQLLRDNFTLWTSDLEEGGEHSKGDERQ 248          
BLAST of CV712675 vs. ExPASy Swiss-Prot
Match: 1433A_SOYBN (14-3-3-like protein A OS=Glycine max GN=GF14A PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 7.089e-35
Identity = 71/83 (85.54%), Postives = 78/83 (93.98%), Query Frame = -3
Query:  361 LSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDEAQK 609
            L+PTHPIRLGLALNFSVFYYEI+NSP+RAC+LAKQAFDEAISELDTL EESYKDSTLIMQLLRDNLTLWTSDI +  GDE ++
Sbjct:  167 LAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDIAGDEIKE 249          
BLAST of CV712675 vs. ExPASy Swiss-Prot
Match: 14332_MAIZE (14-3-3-like protein GF14-12 OS=Zea mays GN=GRF2 PE=2 SV=2)

HSP 1 Score: 147.132 bits (370), Expect = 7.089e-35
Identity = 75/90 (83.33%), Postives = 80/90 (88.89%), Query Frame = -3
Query:  349 LSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGD---EAQKMDIS 609
            L+PTHPIRLGLALNFSVFYYEI+NSP+RAC LAKQAFDEAISELDTLSEESYKDSTLIMQLL DNLTLWTSDI ED  +   EA K D+S
Sbjct:  169 LAPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAISELDTLSEESYKDSTLIMQLLHDNLTLWTSDISEDPAEEIREAPKHDLS 258          
BLAST of CV712675 vs. ExPASy Swiss-Prot
Match: BMH2_YEAST (Protein BMH2 OS=Saccharomyces cerevisiae GN=BMH2 PE=1 SV=3)

HSP 1 Score: 146.747 bits (369), Expect = 9.259e-35
Identity = 70/83 (84.34%), Postives = 77/83 (92.77%), Query Frame = -3
Query:  361 LSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDEAQK 609
            L PTHPIRLGLALNFSVFYYEI NSP++ACHLAKQAFD+AI+ELDTLSEESYKDSTLIMQLLRDNLTLWTSDI E G ++ Q+
Sbjct:  165 LPPTHPIRLGLALNFSVFYYEIQNSPDKACHLAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDISESGQEDQQQ 247          
BLAST of CV712675 vs. ExPASy Swiss-Prot
Match: 1433A_VICFA (14-3-3-like protein A OS=Vicia faba PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.209e-34
Identity = 70/83 (84.34%), Postives = 77/83 (92.77%), Query Frame = -3
Query:  361 LSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDEAQK 609
            L PTHPIRLGLALNFSVFYYEI+NSP+RAC LAKQAFDEAI+ELDTL EESYKDSTLIMQLLRDNLTLWTSD+ +DG DE ++
Sbjct:  169 LPPTHPIRLGLALNFSVFYYEILNSPDRACGLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKE 251          
BLAST of CV712675 vs. ExPASy Swiss-Prot
Match: 1433B_HORVU (14-3-3-like protein B OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.579e-34
Identity = 71/80 (88.75%), Postives = 75/80 (93.75%), Query Frame = -3
Query:  370 LSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDE 609
            L PTHPIRLGLALNFSVFYYEI+NSP+RAC LAKQAFDEAISELD+LSEESYKDSTLIMQLLRDNLTLWTSDI ED  +E
Sbjct:  170 LPPTHPIRLGLALNFSVFYYEILNSPDRACDLAKQAFDEAISELDSLSEESYKDSTLIMQLLRDNLTLWTSDISEDAAEE 249          
The following BLAST results are available for this feature:
BLAST of CV712675 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
1433_OENEH5.428e-3583.1314-3-3-like protein OS=Oenothera elata subsp. hook... [more]
14336_SOLLC5.428e-3584.3414-3-3 protein 6 OS=Solanum lycopersicum GN=TFT6 P... [more]
14335_SOLTU5.428e-3584.3414-3-3-like protein 16R OS=Solanum tuberosum PE=2 ... [more]
14335_SOLLC5.428e-3584.3414-3-3 protein 5 OS=Solanum lycopersicum GN=TFT5 P... [more]
1433_TOBAC7.089e-3584.8814-3-3-like protein OS=Nicotiana tabacum PE=2 SV=1[more]
1433A_SOYBN7.089e-3585.5414-3-3-like protein A OS=Glycine max GN=GF14A PE=2... [more]
14332_MAIZE7.089e-3583.3314-3-3-like protein GF14-12 OS=Zea mays GN=GRF2 PE... [more]
BMH2_YEAST9.259e-3584.34Protein BMH2 OS=Saccharomyces cerevisiae GN=BMH2 P... [more]
1433A_VICFA1.209e-3484.3414-3-3-like protein A OS=Vicia faba PE=2 SV=1[more]
1433B_HORVU1.579e-3488.7514-3-3-like protein B OS=Hordeum vulgare PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001L22_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001L22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712675 ID=CV712675; Name=CV712675; organism=Citrus sinensis; type=EST; length=641bp
CCCCCTTTTTTTGGTCTTACACTAAGTCCAAATTGATCAGCAGCAGCAGA
TATAAAAGATTCTGGGATGCAAATGATACAAGCAGTCCAATCATGAAACT
CTTGACAGTGAAGATAACACCCACATTATAGGAACAGCACAATAACAGTA
CTTGAGTGTCTCTTGTAAACTAAGAAAAACACCGGGAGTCATAAAGGTAT
TGCAGCTTCCTTGCTATCATATGCTAGAGCTCCCAAGCTCCTGGCTGGTT
CACTGAGGACAGAAAACAACAAAGATTGCAACTCTGCTCCAAAATAGGAA
AACAAACCCACCTCTGCTTCTTCAATCTTCACCTTCACCCTCTTTAGCAG
AGATGTCCATTTTCTGGGCTTCATCACCTCCATCCTCTGGTATGTCAGAA
GTCCAAAGAGTGAGGTTGTCCCTCAATAGCTGCATTATCAACGTGCTGTC
TTTGTAAGATTCCTCACTTAATGTATCCAATTCTGAGATGGCTTCATCAA
AGGCCTGCTTTGCAAGGTGGCATGCCCTTTCAGGAGAGTTCATAATCTCA
TAGTAAAAAACTGAGAAGTTCAAGGCCAAACCAAGTCGGATGGGGTGGGT
AGGAGACAATTCAGCTTCTGCGGTAGTAGAAGCTGCCTCCT
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