CV712666
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712666 vs. ExPASy Swiss-Prot
Match: RL2_RICCK (50S ribosomal protein L2 OS=Rickettsia canadensis (strain McKiel) GN=rplB PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.913e-13 Identity = 36/72 (50.00%), Postives = 50/72 (69.44%), Query Frame = 2 Query: 158 RALRQFTLGKGKSAGRNSSGRITIFHRGGGSKRLQRRIDLKRTTSSI-GIVERVEYDPNRSSWIAPVRWIEG 370 R + T G K+ GRN+ GRIT +HRGGG K+L R ID KR I +VER+EYDPNR+++IA +++ +G Sbjct: 28 RPFKSLTKGISKTGGRNNHGRITSWHRGGGHKKLYRIIDFKRNKIDISAVVERIEYDPNRTAFIALIKYEDG 99
BLAST of CV712666 vs. ExPASy Swiss-Prot
Match: RL2_JANSC (50S ribosomal protein L2 OS=Jannaschia sp. (strain CCS1) GN=rplB PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.913e-13 Identity = 38/74 (51.35%), Postives = 51/74 (68.92%), Query Frame = 2 Query: 158 RALRQFTLGKGKSAGRNSSGRITIFHRGGGSKRLQRRIDLKRTTSSI-GIVERVEYDPNRSSWIAPVRWIEGVQ 376 R ++ T G K GRN++GRIT RGGG+KRL R +D KRT + VER+EYDPNR+++IA VR+ +G Q Sbjct: 28 RPVKSLTEGLTKKGGRNNTGRITARRRGGGAKRLYRIVDFKRTKFDVSATVERIEYDPNRTAFIALVRYEDGEQ 101
BLAST of CV712666 vs. ExPASy Swiss-Prot
Match: RL2_WOLPP (50S ribosomal protein L2 OS=Wolbachia pipientis subsp. Culex pipiens (strain wPip) GN=rplB PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.033e-12 Identity = 40/86 (46.51%), Postives = 54/86 (62.79%), Query Frame = 2 Query: 110 GNRMGTKQAMTKFKEVRALRQFTLGKGKSAGRNSSGRITIFHRGGGSKRLQRRIDLKRTTSSIGIVERVEYDPNRSSWIAPVRWIE 367 G + +K ++K K ++L GK S GRN+ GRIT HRGGG K+ R ID KR S GIVE++EYDPNRS ++A + + E Sbjct: 15 GTILISKIGLSKDKPEKSL---VFGKKSSGGRNNHGRITTRHRGGGHKKKYRVIDFKRNRSDQGIVEKIEYDPNRSGFLALISYKE 97
BLAST of CV712666 vs. ExPASy Swiss-Prot
Match: RL2_RHOSK (50S ribosomal protein L2 OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) GN=rplB PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.350e-12 Identity = 34/72 (47.22%), Postives = 53/72 (73.61%), Query Frame = 2 Query: 158 RALRQFTLGKGKSAGRNSSGRITIFHRGGGSKRLQRRIDLKRTTSSI-GIVERVEYDPNRSSWIAPVRWIEG 370 R ++ G K+ GRN++GR+T++H+GGG+KRL R +D KR + +VER+EYDPNR+++IA VR+ +G Sbjct: 28 RPVKTLVEGLIKTGGRNNTGRVTMWHKGGGAKRLYRIVDFKRRKFDVPAVVERIEYDPNRTAFIALVRYEDG 99
BLAST of CV712666 vs. ExPASy Swiss-Prot
Match: RL2_RHOS5 (50S ribosomal protein L2 OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=rplB PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.350e-12 Identity = 34/72 (47.22%), Postives = 53/72 (73.61%), Query Frame = 2 Query: 158 RALRQFTLGKGKSAGRNSSGRITIFHRGGGSKRLQRRIDLKRTTSSI-GIVERVEYDPNRSSWIAPVRWIEG 370 R ++ G K+ GRN++GR+T++H+GGG+KRL R +D KR + +VER+EYDPNR+++IA VR+ +G Sbjct: 28 RPVKTLVEGLIKTGGRNNTGRVTMWHKGGGAKRLYRIVDFKRRKFDVPAVVERIEYDPNRTAFIALVRYEDG 99
BLAST of CV712666 vs. ExPASy Swiss-Prot
Match: RL2_RHOS4 (50S ribosomal protein L2 OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=rplB PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.350e-12 Identity = 34/72 (47.22%), Postives = 53/72 (73.61%), Query Frame = 2 Query: 158 RALRQFTLGKGKSAGRNSSGRITIFHRGGGSKRLQRRIDLKRTTSSI-GIVERVEYDPNRSSWIAPVRWIEG 370 R ++ G K+ GRN++GR+T++H+GGG+KRL R +D KR + +VER+EYDPNR+++IA VR+ +G Sbjct: 28 RPVKTLVEGLIKTGGRNNTGRVTMWHKGGGAKRLYRIVDFKRRKFDVPAVVERIEYDPNRTAFIALVRYEDG 99
BLAST of CV712666 vs. ExPASy Swiss-Prot
Match: RL2_RHOS1 (50S ribosomal protein L2 OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=rplB PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.350e-12 Identity = 34/72 (47.22%), Postives = 53/72 (73.61%), Query Frame = 2 Query: 158 RALRQFTLGKGKSAGRNSSGRITIFHRGGGSKRLQRRIDLKRTTSSI-GIVERVEYDPNRSSWIAPVRWIEG 370 R ++ G K+ GRN++GR+T++H+GGG+KRL R +D KR + +VER+EYDPNR+++IA VR+ +G Sbjct: 28 RPVKTLVEGLIKTGGRNNTGRVTMWHKGGGAKRLYRIVDFKRRKFDVPAVVERIEYDPNRTAFIALVRYEDG 99
BLAST of CV712666 vs. ExPASy Swiss-Prot
Match: RL2_NITHX (50S ribosomal protein L2 OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=rplB PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.350e-12 Identity = 40/87 (45.98%), Postives = 58/87 (66.67%), Query Frame = 2 Query: 119 MGTKQAMTKFKEVRALRQFTLGKGKSAGRNSSGRITIFHRGGGSKRLQRRIDLKRTTSSI-GIVERVEYDPNRSSWIAPVRWIEGVQ 376 M + A+ K K V+AL + GKG GRN++GRIT+ RGGG K+ R +D KR + IVER+EYDPNR+++IA +++ +G Q Sbjct: 18 MVDRSALYKGKPVKALTEGKRGKG---GRNNTGRITVRFRGGGHKQAYRNVDFKRGKEDVPAIVERLEYDPNRTAFIALIKYQDGEQ 101
BLAST of CV712666 vs. ExPASy Swiss-Prot
Match: RL2_ORITB (50S ribosomal protein L2 OS=Orientia tsutsugamushi (strain Boryong) GN=rplB PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.763e-12 Identity = 37/72 (51.39%), Postives = 50/72 (69.44%), Query Frame = 2 Query: 158 RALRQFTLGKGKSAGRNSSGRITIFHRGGGSKRLQRRIDLKRTTSSI-GIVERVEYDPNRSSWIAPVRWIEG 370 R L++ G K+ GRN+ GRITI+HRG G K+L R ID KR I VER+EYDPNR+++IA +R+ +G Sbjct: 28 RPLKKLAKGISKTGGRNNLGRITIWHRGKGHKQLYRMIDFKRRVFDIYATVERIEYDPNRTAFIALIRYDDG 99
BLAST of CV712666 vs. ExPASy Swiss-Prot
Match: RL2_DINSH (50S ribosomal protein L2 OS=Dinoroseobacter shibae (strain DFL 12) GN=rplB PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.763e-12 Identity = 35/74 (47.30%), Postives = 51/74 (68.92%), Query Frame = 2 Query: 158 RALRQFTLGKGKSAGRNSSGRITIFHRGGGSKRLQRRIDLKRTTSSI-GIVERVEYDPNRSSWIAPVRWIEGVQ 376 R ++ T G K GRN++GRIT+ RGGG+KRL R +D KR + G++ R+EYDPNR+++IA V + +G Q Sbjct: 28 RPVKSLTEGLSKKGGRNNTGRITMRRRGGGAKRLYRIVDFKRRKFDVEGVITRIEYDPNRTAFIALVTYTDGEQ 101 The following BLAST results are available for this feature:
BLAST of CV712666 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 90
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV712666 ID=CV712666; Name=CV712666; organism=Citrus sinensis; type=EST; length=759bpback to top |