CV712620
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712620 vs. ExPASy Swiss-Prot
Match: COX3_STRCO (Probable cytochrome c oxidase subunit 3 OS=Streptomyces coelicolor GN=ctaE PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.088e-11 Identity = 38/90 (42.22%), Postives = 48/90 (53.33%), Query Frame = -2 Query: 525 FTGFQGMEYYQAP----FTISDSIYGSTFYLATGFHGFHVIIGTL-FLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVWLFLFVSIY 779 F G Q EY + ++S YGS FYL TGFHG HV G + FL++ G T E ++YWHFVDVVW+ LF +IY Sbjct: 114 FIGGQVFEYTELVKHEGISLSSDPYGSAFYLTTGFHGLHVTGGLIAFLLVLGRTYAARRFTHEQATAAIVVSYYWHFVDVVWIGLFATIY 203
BLAST of CV712620 vs. ExPASy Swiss-Prot
Match: COX3_STRAW (Probable cytochrome c oxidase subunit 3 OS=Streptomyces avermitilis GN=ctaE PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.088e-11 Identity = 38/90 (42.22%), Postives = 48/90 (53.33%), Query Frame = -2 Query: 525 FTGFQGMEYYQAP----FTISDSIYGSTFYLATGFHGFHVIIGTL-FLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVWLFLFVSIY 779 F G Q EY + ++S YGS FYL TGFHG HV G + FL++ G T E ++YWHFVDVVW+ LF +IY Sbjct: 114 FIGGQVFEYTELVKKDGLSLSSDPYGSVFYLTTGFHGLHVTGGLIAFLLVLGRTYAARRFTHEQATAAIVVSYYWHFVDVVWIGLFATIY 203
BLAST of CV712620 vs. ExPASy Swiss-Prot
Match: COX3_MYCTU (Probable cytochrome c oxidase subunit 3 OS=Mycobacterium tuberculosis GN=ctaE PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.420e-11 Identity = 32/72 (44.44%), Postives = 41/72 (56.94%), Query Frame = -2 Query: 522 TISDSIYGSTFYLATGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVWLFLFVSIYW 737 +I S YGS FYLATGFHG HV G + I +R + T ++YWHFVD+VW+ LF IY+ Sbjct: 130 SIPSSAYGSVFYLATGFHGLHVTGGLIAFIFLLVRTGMSKFTPAQATASIVVSYYWHFVDIVWIALFTVIYF 201
BLAST of CV712620 vs. ExPASy Swiss-Prot
Match: COX3_MYCBO (Probable cytochrome c oxidase subunit 3 OS=Mycobacterium bovis GN=ctaE PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.420e-11 Identity = 32/72 (44.44%), Postives = 41/72 (56.94%), Query Frame = -2 Query: 522 TISDSIYGSTFYLATGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVWLFLFVSIYW 737 +I S YGS FYLATGFHG HV G + I +R + T ++YWHFVD+VW+ LF IY+ Sbjct: 130 SIPSSAYGSVFYLATGFHGLHVTGGLIAFIFLLVRTGMSKFTPAQATASIVVSYYWHFVDIVWIALFTVIYF 201
BLAST of CV712620 vs. ExPASy Swiss-Prot
Match: COX13_THET8 (Cytochrome c oxidase polypeptide I+III OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=caaA PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.397e-11 Identity = 36/117 (30.77%), Postives = 56/117 (47.86%), Query Frame = -2 Query: 519 NWAHHAILAGKEKRXXXXXXXXXXXXXVFTGFQGMEYYQAPFTIS--DSIYGSTFYLATGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVWLFLFVSIYWW 863 ++AHH + G+ +F Q E+YQ S ++++ + F+ G HG HV+IG LI+ ++ G +T +H EAA+ YWH VD VWL + Y W Sbjct: 675 HFAHHDLRRGRFNPFRFGLLVTIILGVLFFLVQSWEFYQFYHHSSWQENLWTAAFFTIVGLHGLHVVIGGFGLILAYLQALRGKITLHNHGTLEAASMYWHLVDAVWLVIVTIFYVW 791
BLAST of CV712620 vs. ExPASy Swiss-Prot
Match: COX3_BACSU (Cytochrome c oxidase subunit 3 OS=Bacillus subtilis GN=ctaE PE=3 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 7.049e-11 Identity = 36/93 (38.71%), Postives = 47/93 (50.54%), Query Frame = -2 Query: 516 GFQGMEYYQAP-------FTISDSIYGSTFYLATGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVWLFLFVSIYWWG 773 GF G+E Y+ FTI+ S GS FY G HG HV G +++ IR L F A+ YWHF+DVVW+F+F +Y G Sbjct: 112 GFLGLEIYEFKHYTHEFGFTITSSALGSAFYTLVGTHGAHVAFGLMWISTLMIRNAKRGLNLYTAPKFYVASLYWHFIDVVWVFIFTVVYLMG 204 The following BLAST results are available for this feature:
BLAST of CV712620 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 176
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712620 ID=CV712620; Name=CV712620; organism=Citrus sinensis; type=EST; length=870bpback to top |