CV712551
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_CYAP4 (Ribosome-recycling factor OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=frr PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 7.136e-44 Identity = 84/149 (56.38%), Postives = 118/149 (79.19%), Query Frame = 2 Query: 344 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDL 790 DV+ M+++++ + FN++RTGR+N ++LD++ VEYYG+ L+S+A I+TPDSS++ IQP+D++SL IEKAI SDLG+TPNNDG VIRL +P LTS+RRKEL K +K AEEGKV++RN+RRDA+ + +K K +LSED VKDL Sbjct: 5 DVEDHMQKSVEATQRAFNTIRTGRANTSLLDRVTVEYYGAETPLRSLANISTPDSSTIAIQPFDRNSLNLIEKAISMSDLGLTPNNDGTVIRLNIPPLTSDRRKELVKTASKLAEEGKVSIRNVRRDAVDSVKKQGKAGELSEDEVKDL 153
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_SYNS3 (Ribosome-recycling factor OS=Synechococcus sp. (strain CC9311) GN=frr PE=3 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.217e-43 Identity = 80/148 (54.05%), Postives = 115/148 (77.70%), Query Frame = 2 Query: 344 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKD 787 D++A M ++++ + NFN++RTGR+NP++LD+I VEYYG+ LKS+A ++TPDS ++ +QP+D SL IEKAI +SDLG TPNNDG++IR+ +P LT ERRKE K+ AK +EEGKVA+R++RRDA+ +K +KE LSED +D Sbjct: 5 DLEANMRKSVEATQRNFNTIRTGRANPSLLDRINVEYYGADTPLKSLASLSTPDSQTIAVQPFDMGSLALIEKAIATSDLGFTPNNDGKIIRINVPPLTEERRKEFCKLAAKYSEEGKVALRSVRRDAIDKIKKQEKEGDLSEDQSRD 152
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_SYNY3 (Ribosome-recycling factor OS=Synechocystis sp. (strain PCC 6803) GN=frr PE=3 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.590e-43 Identity = 83/149 (55.70%), Postives = 116/149 (77.85%), Query Frame = 2 Query: 344 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDL 790 ++K M+++++ + +FN++RTGR+N ++LD+I VEYYG+ LKS+A I TPD+S+++IQP+D S+ +IEKAI SDLG+TPNNDG+VIRL +P LT+ERRKEL KV K AEEGKVA+RNIRRDA+ K +K +SED +DL Sbjct: 5 ELKDHMQKSVEATQRSFNTIRTGRANASLLDRITVEYYGAETPLKSLATIGTPDASTIVIQPFDMGSIGTIEKAISLSDLGLTPNNDGKVIRLNIPPLTAERRKELVKVAGKLAEEGKVAIRNIRRDAVDEVRKQEKNSDISEDEARDL 153
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_NOSP7 (Ribosome-recycling factor OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=frr PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 4.625e-43 Identity = 80/148 (54.05%), Postives = 117/148 (79.05%), Query Frame = 2 Query: 344 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKD 787 D K++M+ +++ + FN++RTGR+N ++LDK+ V+YYGSP LKS+A I+TPD+S++LIQPY++++L IEKAI SD+G+TP+NDG VIRL +P LTS+RRKE K+ K AEEG+VA+RNIRRDA+ + K +K ++S+D KD Sbjct: 5 DAKSKMQSSVESTQRAFNTIRTGRANASLLDKVLVDYYGSPTPLKSLANISTPDASTILIQPYERNTLNIIEKAISLSDVGLTPSNDGSVIRLNIPPLTSDRRKEFVKMATKYAEEGRVAIRNIRRDAIDSIRKQEKASEISKDESKD 152
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_CYAP7 (Ribosome-recycling factor OS=Cyanothece sp. (strain PCC 7424) GN=frr PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 4.625e-43 Identity = 81/149 (54.36%), Postives = 117/149 (78.52%), Query Frame = 2 Query: 344 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDL 790 +V+ M++TI+ + +FN++RTGR+N A+LD++ V+YYG+ LKS+A I TPD++++ IQPYD+ S+ IEKAI SD+G+TPNNDG++IRL +P LT+ERRKEL K+ K AEEGKVA+RNIRRDA+ + K +K +LSED ++L Sbjct: 5 EVQDNMQKTIESTQRSFNTIRTGRANSALLDRVMVDYYGTETPLKSLANITTPDATTIAIQPYDRGSMGQIEKAIQLSDIGLTPNNDGQMIRLNIPPLTTERRKELVKLAGKLAEEGKVAIRNIRRDAIDSVRKQEKNHELSEDESRNL 153
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_PROMT (Ribosome-recycling factor OS=Prochlorococcus marinus (strain NATL2A) GN=frr PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 7.889e-43 Identity = 82/148 (55.41%), Postives = 113/148 (76.35%), Query Frame = 2 Query: 344 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKD 787 ++K M ++I+ + NFN++RTGR+N ++LD+I VEYYG+ LKS+A I TPDS ++ IQP+D SL SIEKAI +SDLG TPNNDG++IR+ +P LT ERRKE K+ +K AEEGKVA+RNIRR+A+ +K +K+ LSED +D Sbjct: 5 ELKTTMSKSIEAAQRNFNTIRTGRANTSLLDRISVEYYGAETPLKSLATITTPDSQTIAIQPFDLGSLASIEKAIATSDLGFTPNNDGKIIRINVPPLTEERRKEFCKLASKYAEEGKVALRNIRREAIDRVKKSEKDGDLSEDQSRD 152
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_PROMM (Ribosome-recycling factor OS=Prochlorococcus marinus (strain MIT 9313) GN=frr PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 7.889e-43 Identity = 80/148 (54.05%), Postives = 115/148 (77.70%), Query Frame = 2 Query: 344 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKD 787 ++K M ++++ + NF ++RTGR+NP++LD+I VEYYG+ LKS+A I+TPDS ++ IQP+D S+ IEKAI +SDLG+TPNNDG++IR+ +P LT ERRKE K+ A+ AEEGKVA+RNIRRDA+ +KL+K+ +LS+D D Sbjct: 5 ELKDNMHKSVEATQRNFATIRTGRANPSLLDRINVEYYGTETPLKSLATISTPDSQTIAIQPFDNGSMGLIEKAIATSDLGLTPNNDGKIIRINVPPLTEERRKEFCKLAARYAEEGKVALRNIRRDAIDKVKKLEKDAELSKDQSHD 152
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_TRIEI (Ribosome-recycling factor OS=Trichodesmium erythraeum (strain IMS101) GN=frr PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 1.030e-42 Identity = 81/149 (54.36%), Postives = 115/149 (77.18%), Query Frame = 2 Query: 344 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDL 790 + + +M++ I+ + +FN+VRTGR+N ++LD++ VEYYGSP LKS+A I PD+S++ IQPYDK+SL IEKAI SD+G+TPNNDG +IRL +P LT+ERR+E+ K AK AEEGKV++RNIRRDA+ + K +K +S+D +DL Sbjct: 5 EAEEKMQKAIEATKNSFNTVRTGRANASLLDRVMVEYYGSPTQLKSMANIGIPDASTITIQPYDKTSLGLIEKAINMSDVGLTPNNDGSIIRLNIPALTAERRQEMVKKTAKLAEEGKVSIRNIRRDAVDSIRKQEKNSDISKDESRDL 153
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_SYNSC (Ribosome-recycling factor OS=Synechococcus sp. (strain CC9605) GN=frr PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.346e-42 Identity = 80/148 (54.05%), Postives = 115/148 (77.70%), Query Frame = 2 Query: 344 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKD 787 D++A M ++++ + NFN++RTGR+N ++LD+I VEYYG+ LKS+A ++TPDS ++ IQP+D S+L SIEKAI S+LG TPNNDG++IR+ +P LT ERRKE K+ +K AEEGKVA+RN+RRDA+ +K +KE + SED +D Sbjct: 5 DLEASMRKSVEATQRNFNTIRTGRANSSLLDRISVEYYGAETPLKSLATLSTPDSQTIQIQPFDISALASIEKAIAMSELGFTPNNDGKIIRINVPPLTEERRKEFCKLASKYAEEGKVALRNLRRDAIDKIKKQEKEGEFSEDQSRD 152
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_PROM1 (Ribosome-recycling factor OS=Prochlorococcus marinus (strain NATL1A) GN=frr PE=3 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.758e-42 Identity = 81/148 (54.73%), Postives = 113/148 (76.35%), Query Frame = 2 Query: 344 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKD 787 ++K M ++++ + NFN++RTGR+N ++LD+I VEYYG+ LKS+A I TPDS ++ IQP+D SL SIEKAI +SDLG TPNNDG++IR+ +P LT ERRKE K+ +K AEEGKVA+RNIRR+A+ +K +K+ LSED +D Sbjct: 5 ELKNTMSKSVEAAQRNFNTIRTGRANTSLLDRISVEYYGAETPLKSLATITTPDSQTIAIQPFDLGSLASIEKAIATSDLGFTPNNDGKIIRINVPPLTEERRKEFCKLASKYAEEGKVALRNIRREAIDRVKKSEKDGDLSEDQSRD 152 The following BLAST results are available for this feature:
BLAST of CV712551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712551 ID=CV712551; Name=CV712551; organism=Citrus sinensis; type=EST; length=795bpback to top |