CV712551

Overview
NameCV712551
Unique NameCV712551
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length795
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_STRPM (Ribosome-recycling factor OS=Streptococcus pyogenes serotype M28 GN=frr PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 7.152e-36
Identity = 72/147 (48.98%), Postives = 104/147 (70.75%), Query Frame = 2 
Query:  350 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDL 790
            K R  ++   +   + S+R GR+N ++LD+I+V+YYG+P  L  +A I  P++  LLI P+DKSS+K IE+A+ +SDLG+TP NDG VIRL +P LT E RKEL+K V K  E  K+A+RNIRRDA+   +K +K K+++ED +K L
Sbjct:   10 KERFAQSHQSLSREYASIRAGRANASLLDRIQVDYYGAPTPLNQLASITVPEARVLLISPFDKSSIKDIERALNASDLGITPANDGSVIRLVIPALTEETRKELAKEVKKVGENAKIAIRNIRRDAMDDAKKQEKAKEITEDELKTL 156
[Close]
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_STRPG (Ribosome-recycling factor OS=Streptococcus pyogenes serotype M5 (strain Manfredo) GN=frr PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 7.152e-36
Identity = 72/147 (48.98%), Postives = 104/147 (70.75%), Query Frame = 2 
Query:  350 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDL 790
            K R  ++   +   + S+R GR+N ++LD+I+V+YYG+P  L  +A I  P++  LLI P+DKSS+K IE+A+ +SDLG+TP NDG VIRL +P LT E RKEL+K V K  E  K+A+RNIRRDA+   +K +K K+++ED +K L
Sbjct:   10 KERFAQSHQSLSREYASIRAGRANASLLDRIQVDYYGAPTPLNQLASITVPEARVLLISPFDKSSIKDIERALNASDLGITPANDGSVIRLVIPALTEETRKELAKEVKKVGENAKIAIRNIRRDAMDDAKKQEKAKEITEDELKTL 156
[Close]
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_STRPF (Ribosome-recycling factor OS=Streptococcus pyogenes serotype M4 (strain MGAS10750) GN=frr PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 7.152e-36
Identity = 72/147 (48.98%), Postives = 104/147 (70.75%), Query Frame = 2 
Query:  350 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDL 790
            K R  ++   +   + S+R GR+N ++LD+I+V+YYG+P  L  +A I  P++  LLI P+DKSS+K IE+A+ +SDLG+TP NDG VIRL +P LT E RKEL+K V K  E  K+A+RNIRRDA+   +K +K K+++ED +K L
Sbjct:   10 KERFAQSHQSLSREYASIRAGRANASLLDRIQVDYYGAPTPLNQLASITVPEARVLLISPFDKSSIKDIERALNASDLGITPANDGSVIRLVIPALTEETRKELAKEVKKVGENAKIAIRNIRRDAMDDAKKQEKAKEITEDELKTL 156
[Close]
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_STRPD (Ribosome-recycling factor OS=Streptococcus pyogenes serotype M2 (strain MGAS10270) GN=frr PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 7.152e-36
Identity = 72/147 (48.98%), Postives = 104/147 (70.75%), Query Frame = 2 
Query:  350 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDL 790
            K R  ++   +   + S+R GR+N ++LD+I+V+YYG+P  L  +A I  P++  LLI P+DKSS+K IE+A+ +SDLG+TP NDG VIRL +P LT E RKEL+K V K  E  K+A+RNIRRDA+   +K +K K+++ED +K L
Sbjct:   10 KERFAQSHQSLSREYASIRAGRANASLLDRIQVDYYGAPTPLNQLASITVPEARVLLISPFDKSSIKDIERALNASDLGITPANDGSVIRLVIPALTEETRKELAKEVKKVGENAKIAIRNIRRDAMDDAKKQEKAKEITEDELKTL 156
[Close]
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_STRPC (Ribosome-recycling factor OS=Streptococcus pyogenes serotype M12 (strain MGAS9429) GN=frr PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 7.152e-36
Identity = 72/147 (48.98%), Postives = 104/147 (70.75%), Query Frame = 2 
Query:  350 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDL 790
            K R  ++   +   + S+R GR+N ++LD+I+V+YYG+P  L  +A I  P++  LLI P+DKSS+K IE+A+ +SDLG+TP NDG VIRL +P LT E RKEL+K V K  E  K+A+RNIRRDA+   +K +K K+++ED +K L
Sbjct:   10 KERFAQSHQSLSREYASIRAGRANASLLDRIQVDYYGAPTPLNQLASITVPEARVLLISPFDKSSIKDIERALNASDLGITPANDGSVIRLVIPALTEETRKELAKEVKKVGENAKIAIRNIRRDAMDDAKKQEKAKEITEDELKTL 156
[Close]
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_STRPB (Ribosome-recycling factor OS=Streptococcus pyogenes serotype M12 (strain MGAS2096) GN=frr PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 7.152e-36
Identity = 72/147 (48.98%), Postives = 104/147 (70.75%), Query Frame = 2 
Query:  350 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDL 790
            K R  ++   +   + S+R GR+N ++LD+I+V+YYG+P  L  +A I  P++  LLI P+DKSS+K IE+A+ +SDLG+TP NDG VIRL +P LT E RKEL+K V K  E  K+A+RNIRRDA+   +K +K K+++ED +K L
Sbjct:   10 KERFAQSHQSLSREYASIRAGRANASLLDRIQVDYYGAPTPLNQLASITVPEARVLLISPFDKSSIKDIERALNASDLGITPANDGSVIRLVIPALTEETRKELAKEVKKVGENAKIAIRNIRRDAMDDAKKQEKAKEITEDELKTL 156
[Close]
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_STRP8 (Ribosome-recycling factor OS=Streptococcus pyogenes serotype M18 GN=frr PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 7.152e-36
Identity = 72/147 (48.98%), Postives = 104/147 (70.75%), Query Frame = 2 
Query:  350 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDL 790
            K R  ++   +   + S+R GR+N ++LD+I+V+YYG+P  L  +A I  P++  LLI P+DKSS+K IE+A+ +SDLG+TP NDG VIRL +P LT E RKEL+K V K  E  K+A+RNIRRDA+   +K +K K+++ED +K L
Sbjct:   10 KERFAQSHQSLSREYASIRAGRANASLLDRIQVDYYGAPTPLNQLASITVPEARVLLISPFDKSSIKDIERALNASDLGITPANDGSVIRLVIPALTEETRKELAKEVKKVGENAKIAIRNIRRDAMDDAKKQEKAKEITEDELKTL 156
[Close]
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_STRP6 (Ribosome-recycling factor OS=Streptococcus pyogenes serotype M6 GN=frr PE=1 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 7.152e-36
Identity = 72/147 (48.98%), Postives = 104/147 (70.75%), Query Frame = 2 
Query:  350 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDL 790
            K R  ++   +   + S+R GR+N ++LD+I+V+YYG+P  L  +A I  P++  LLI P+DKSS+K IE+A+ +SDLG+TP NDG VIRL +P LT E RKEL+K V K  E  K+A+RNIRRDA+   +K +K K+++ED +K L
Sbjct:   10 KERFAQSHQSLSREYASIRAGRANASLLDRIQVDYYGAPTPLNQLASITVPEARVLLISPFDKSSIKDIERALNASDLGITPANDGSVIRLVIPALTEETRKELAKEVKKVGENAKIAIRNIRRDAMDDAKKQEKAKEITEDELKTL 156
[Close]
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_STRP3 (Ribosome-recycling factor OS=Streptococcus pyogenes serotype M3 GN=frr PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 7.152e-36
Identity = 72/147 (48.98%), Postives = 104/147 (70.75%), Query Frame = 2 
Query:  350 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDL 790
            K R  ++   +   + S+R GR+N ++LD+I+V+YYG+P  L  +A I  P++  LLI P+DKSS+K IE+A+ +SDLG+TP NDG VIRL +P LT E RKEL+K V K  E  K+A+RNIRRDA+   +K +K K+++ED +K L
Sbjct:   10 KERFAQSHQSLSREYASIRAGRANASLLDRIQVDYYGAPTPLNQLASITVPEARVLLISPFDKSSIKDIERALNASDLGITPANDGSVIRLVIPALTEETRKELAKEVKKVGENAKIAIRNIRRDAMDDAKKQEKAKEITEDELKTL 156
[Close]
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_STRP1 (Ribosome-recycling factor OS=Streptococcus pyogenes serotype M1 GN=frr PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 7.152e-36
Identity = 72/147 (48.98%), Postives = 104/147 (70.75%), Query Frame = 2 
Query:  350 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDL 790
            K R  ++   +   + S+R GR+N ++LD+I+V+YYG+P  L  +A I  P++  LLI P+DKSS+K IE+A+ +SDLG+TP NDG VIRL +P LT E RKEL+K V K  E  K+A+RNIRRDA+   +K +K K+++ED +K L
Sbjct:   10 KERFAQSHQSLSREYASIRAGRANASLLDRIQVDYYGAPTPLNQLASITVPEARVLLISPFDKSSIKDIERALNASDLGITPANDGSVIRLVIPALTEETRKELAKEVKKVGENAKIAIRNIRRDAMDDAKKQEKAKEITEDELKTL 156
The following BLAST results are available for this feature:
BLAST of CV712551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RRF_STRPM7.152e-3648.98Ribosome-recycling factor OS=Streptococcus pyogene... [more]
RRF_STRPG7.152e-3648.98Ribosome-recycling factor OS=Streptococcus pyogene... [more]
RRF_STRPF7.152e-3648.98Ribosome-recycling factor OS=Streptococcus pyogene... [more]
RRF_STRPD7.152e-3648.98Ribosome-recycling factor OS=Streptococcus pyogene... [more]
RRF_STRPC7.152e-3648.98Ribosome-recycling factor OS=Streptococcus pyogene... [more]
RRF_STRPB7.152e-3648.98Ribosome-recycling factor OS=Streptococcus pyogene... [more]
RRF_STRP87.152e-3648.98Ribosome-recycling factor OS=Streptococcus pyogene... [more]
RRF_STRP67.152e-3648.98Ribosome-recycling factor OS=Streptococcus pyogene... [more]
RRF_STRP37.152e-3648.98Ribosome-recycling factor OS=Streptococcus pyogene... [more]
RRF_STRP17.152e-3648.98Ribosome-recycling factor OS=Streptococcus pyogene... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001I21_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001I21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712551 ID=CV712551; Name=CV712551; organism=Citrus sinensis; type=EST; length=795bp
AAGACACTCATTTTGAACCAACTAATTTCTTAAGTCTGAGCGAGCGTTCA
TGGCCACGCACTTTTCTTCAACAGGGCCCATGCGGTCCATTTTCCAACTG
AAATCAAATCCTCCCAAATGCCTCCTTTTCCTCCCTGATTCTTGTCATAG
AAGAGCCGAAACTGCCACGTGCCGTGCTAGCAGCGTTAGTGTGCGCCAGT
GGAGCTCAACTGCAAACTACTCTAGACTTGTGAAATTATCCAACAAACCT
ATCGTTGTAAGACAACTGGCACACAAGAGAAATGGAGTTGTGAGGTGTGC
AACTATTGAAGAAATTGAAGCGGAAAAATCTTCCATTGAGAAGGATGTTA
AAGCTAGGATGGAAAGGACTATCGATATGGTCCGAACCAATTTCAATTCC
GTGAGGACAGGAAGATCGAATCCAGCTATGCTAGATAAGATTGAGGTGGA
ATACTATGGAAGCCCAGTAAGTTTGAAGAGCATAGCTCAAATCAATACCC
CTGATTCAAGTTCTCTATTGATTCAACCATATGACAAATCCAGCTTAAAG
TCTATAGAGAAGGCCATAGTAAGCTCTGATCTTGGCATGACCCCAAACAA
TGATGGTGAAGTCATACGGTTAACCCTTCCTCAATTGACATCCGAAAGGA
GGAAGGAACTGTCAAAGGTTGTGGCCAAACAGGCTGAAGAAGGGAAGGTG
GCAGTTAGGAATATAAGAAGAGATGCGTTAAAAGCTTATGAAAAACTTCA
GAAGGAGAAGAAGCTCTCTGAAGACAATGTGAAGGACTTGTCAAG
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