CV712551
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_RHOPT (Ribosome-recycling factor OS=Rhodopseudomonas palustris (strain TIE-1) GN=frr PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 2.016e-30 Identity = 63/149 (42.28%), Postives = 102/149 (68.46%), Query Frame = 2 Query: 344 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDL 790 ++K RM+ ++ +RTGR++ +ML+ ++V+ YGS + L +A ++ P+ + +Q +DKS +K++EK IV S+LG++P +G+VIRL +P+L ERRKEL KV K AE +VAVR++RRD L +KL+K ++SED+ K L Sbjct: 9 ELKRRMQGAAQSLKHELGGLRTGRASASMLEPVQVDAYGSHMPLNQVATVSVPEPRLISVQVWDKSMVKAVEKGIVDSNLGLSPATEGQVIRLRIPELNEERRKELVKVAHKYAEAARVAVRHVRRDGLDTIKKLEKAHEISEDDQKRL 157
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_RHOPA (Ribosome-recycling factor OS=Rhodopseudomonas palustris GN=frr PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 2.016e-30 Identity = 63/149 (42.28%), Postives = 102/149 (68.46%), Query Frame = 2 Query: 344 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDL 790 ++K RM+ ++ +RTGR++ +ML+ ++V+ YGS + L +A ++ P+ + +Q +DKS +K++EK IV S+LG++P +G+VIRL +P+L ERRKEL KV K AE +VAVR++RRD L +KL+K ++SED+ K L Sbjct: 9 ELKRRMQGAAQSLKHELGGLRTGRASASMLEPVQVDAYGSHMPLNQVATVSVPEPRLISVQVWDKSMVKAVEKGIVDSNLGLSPATEGQVIRLRIPELNEERRKELVKVAHKYAEAARVAVRHVRRDGLDTIKKLEKAHEISEDDQKRL 157
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_PARD8 (Ribosome-recycling factor OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=frr PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 2.016e-30 Identity = 62/144 (43.06%), Postives = 99/144 (68.75%), Query Frame = 2 Query: 356 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKD 787 +M I+ + + +R G++NP +LD ++V YYG+PV L ++A + PD+ +++I P++K ++ IEK I+ S+LG+TP N+GEVIRL +P LT ERR++L K ++AE K++VRN RRDA++A +K K + ED KD Sbjct: 14 KMTFAIEYLDEQLSHIRAGKANPKILDCVKVMYYGAPVPLTNVATVTVPDARTIMITPWEKKIIRDIEKGILDSELGITPENNGEVIRLGIPPLTEERRRQLVKQCKQEAENAKISVRNARRDAIEALKKSIKSDGVPEDVEKD 157
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_METPP (Ribosome-recycling factor OS=Methylibium petroleiphilum (strain PM1) GN=frr PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 2.016e-30 Identity = 63/149 (42.28%), Postives = 102/149 (68.46%), Query Frame = 2 Query: 344 DVKARME----RTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDN 778 D+K E R+I+ ++ +RTGR++P +LD++ VEYYGS VS+ +A ++ D+ ++ +QP++K IEKAI SDLG+ P++ GE++R+ +P L ERR++L+KVV E+ ++AVRN+RRDA +KL K+K +SED+ Sbjct: 5 DIKKTFEQKSARSIESFKSELQKIRTGRAHPGILDQVHVEYYGSMVSISQVANVSLLDARTISVQPWEKGMGPKIEKAIRESDLGLNPSSQGELLRVPMPALNEERRRDLTKVVRGAGEDARIAVRNLRRDANDQAKKLLKDKAISEDD 153
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_SACD2 (Ribosome-recycling factor OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=frr PE=3 SV=2) HSP 1 Score: 132.494 bits (332), Expect = 2.632e-30 Identity = 63/145 (43.45%), Postives = 97/145 (66.90%), Query Frame = 2 Query: 344 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDN 778 D + RM R I+ + T+FN +RTGR++P++LD + V YYGS L +A + D+ +L I P++K+ + IEKAI+ SDLG+ P G++IR+ +P LT E RK K +AE +V++RN+RRDAL + L K+K++SED+ Sbjct: 8 DSEERMSRAIEALGTHFNKIRTGRAHPSILDGVMVSYYGSATPLSQVANVTVLDARTLSISPWEKNIVPEIEKAIMKSDLGLNPVTTGDLIRVPMPMLTEETRKGYIKRARAEAESARVSIRNVRRDALAEVKALVKDKEISEDD 152
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_POLNA (Ribosome-recycling factor OS=Polaromonas naphthalenivorans (strain CJ2) GN=frr PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.632e-30 Identity = 61/141 (43.26%), Postives = 96/141 (68.09%), Query Frame = 2 Query: 356 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDN 778 +M+++++ + N +RTGR+NP +LD + V+YYGS V + +A + D+ ++ + P++K IEKAI SDLG+ P + G++IR+ +P +T ERRKEL+KVV + E KVA+RN+RRDA +KL K+K SED+ Sbjct: 13 KMQQSLESFQHNLTKIRTGRANPGLLDTVHVDYYGSMVPISQVANVALLDARTISVSPWEKGMGAKIEKAIRDSDLGLNPASQGDLIRVPMPAMTEERRKELTKVVRAEGEHAKVAIRNLRRDANDGVKKLVKDKLASEDD 153
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_NEIMF (Ribosome-recycling factor OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=frr PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.632e-30 Identity = 60/145 (41.38%), Postives = 104/145 (71.72%), Query Frame = 2 Query: 350 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVK 784 + +M+R++++++ N VRTGR++ +LD++EVEY+GS V + +A + D+ ++ ++P++ + +EKAI S+LG+ P G++IR+ +P LT ERRK+L KVV +AEEG+V++RN+RRDA +KL K+K++SED + Sbjct: 10 EGKMQRSVEVLKENLAKVRTGRAHTGLLDQVEVEYWGSMVPVSQVANVTLLDARTIGVKPFEGNMAAKVEKAIRDSNLGLNPAAVGDLIRVPMPMLTEERRKDLIKVVRGEAEEGRVSIRNVRRDANDHIKKLLKDKEISEDEAR 154
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_NEIMB (Ribosome-recycling factor OS=Neisseria meningitidis serogroup B GN=frr PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.632e-30 Identity = 60/145 (41.38%), Postives = 104/145 (71.72%), Query Frame = 2 Query: 350 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVK 784 + +M+R++++++ N VRTGR++ +LD++EVEY+GS V + +A + D+ ++ ++P++ + +EKAI S+LG+ P G++IR+ +P LT ERRK+L KVV +AEEG+V++RN+RRDA +KL K+K++SED + Sbjct: 10 EGKMQRSVEVLKENLAKVRTGRAHTGLLDQVEVEYWGSMVPVSQVANVTLLDARTIGVKPFEGNMAAKVEKAIRDSNLGLNPAAVGDLIRVPMPMLTEERRKDLIKVVRGEAEEGRVSIRNVRRDANDHIKKLLKDKEISEDEAR 154
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_NEIMA (Ribosome-recycling factor OS=Neisseria meningitidis serogroup A GN=frr PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.632e-30 Identity = 60/145 (41.38%), Postives = 104/145 (71.72%), Query Frame = 2 Query: 350 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVK 784 + +M+R++++++ N VRTGR++ +LD++EVEY+GS V + +A + D+ ++ ++P++ + +EKAI S+LG+ P G++IR+ +P LT ERRK+L KVV +AEEG+V++RN+RRDA +KL K+K++SED + Sbjct: 10 EGKMQRSVEVLKENLAKVRTGRAHTGLLDQVEVEYWGSMVPVSQVANVTLLDARTIGVKPFEGNMAAKVEKAIRDSNLGLNPAAVGDLIRVPMPMLTEERRKDLIKVVRGEAEEGRVSIRNVRRDANDHIKKLLKDKEISEDEAR 154
BLAST of CV712551 vs. ExPASy Swiss-Prot
Match: RRF_NEIG1 (Ribosome-recycling factor OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=frr PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.632e-30 Identity = 60/145 (41.38%), Postives = 104/145 (71.72%), Query Frame = 2 Query: 350 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVK 784 + +M+R++++++ N VRTGR++ +LD++EVEY+GS V + +A + D+ ++ ++P++ + +EKAI S+LG+ P G++IR+ +P LT ERRK+L KVV +AEEG+V++RN+RRDA +KL K+K++SED + Sbjct: 10 EGKMQRSVEVLKENLAKVRTGRAHTGLLDQVEVEYWGSMVPVSQVANVTLLDARTIGVKPFEGNMAAKVEKAIRDSNLGLNPAAVGDLIRVPMPMLTEERRKDLIKVVRGEAEEGRVSIRNVRRDANDHIKKLLKDKEISEDEAR 154 The following BLAST results are available for this feature:
BLAST of CV712551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712551 ID=CV712551; Name=CV712551; organism=Citrus sinensis; type=EST; length=795bpback to top |