CV712550
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_STRP7 (Ribosome-recycling factor OS=Streptococcus pneumoniae (strain 70585) GN=frr PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 2.369e-40 Identity = 81/165 (49.09%), Postives = 114/165 (69.09%), Query Frame = -3 Query: 179 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 673 K RM ++ + F +R GR+N ++LD++ VEYYG L IA I P++ LL+ P+DKSSLK IE+A+ +SDLG+TP NDG VIRL +P LT E R++L+K V K E KVAVRNIRRDA+ +K +K K+++ED +K L D+QK+TD+ +K ID + Sbjct: 10 KERMTQSHQSLAREFGGIRAGRANASLLDRVHVEYYGVETPLNQIASITIPEARVLLVTPFDKSSLKDIERALNASDLGITPANDGSVIRLVIPALTEETRRDLAKEVKKVGENAKVAVRNIRRDAMDEAKKQEKAKEITEDELKTLEKDIQKVTDDAVKHIDDM 174
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_STRP4 (Ribosome-recycling factor OS=Streptococcus pneumoniae serotype 19F (strain G54) GN=frr PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 2.369e-40 Identity = 81/165 (49.09%), Postives = 114/165 (69.09%), Query Frame = -3 Query: 179 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 673 K RM ++ + F +R GR+N ++LD++ VEYYG L IA I P++ LL+ P+DKSSLK IE+A+ +SDLG+TP NDG VIRL +P LT E R++L+K V K E KVAVRNIRRDA+ +K +K K+++ED +K L D+QK+TD+ +K ID + Sbjct: 10 KERMTQSHQSLAREFGGIRAGRANASLLDRVHVEYYGVETPLNQIASITIPEARVLLVTPFDKSSLKDIERALNASDLGITPANDGSVIRLVIPALTEETRRDLAKEVKKVGENAKVAVRNIRRDAMDEAKKQEKAKEITEDELKTLEKDIQKVTDDAVKHIDDM 174
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_FUSNN (Ribosome-recycling factor OS=Fusobacterium nucleatum subsp. nucleatum GN=frr PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 2.369e-40 Identity = 79/169 (46.75%), Postives = 124/169 (73.37%), Query Frame = -3 Query: 179 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKK--LSEDNVKDLSSDLQKLTDEYMKKIDSI 679 + + +M +TI+ V+ F ++R GR+N +MLD I+VE YGS V L I ++ P++ L+I P+DK+ + IEKAI+++++GMTPNNDG VIRL LP+LT++RRKE K+ +AE GK+A+RNIR+D +KL+K+K+ +SED +K +++Q LTD+Y+K+ID + Sbjct: 11 ECEEKMVKTIEAVKEKFTAIRAGRANVSMLDGIKVENYGSEVPLNQIGTVSAPEARLLVIDPWDKTLISKIEKAILAANIGMTPNNDGRVIRLVLPELTADRRKEYVKLAKNEAENGKIAIRNIRKDINNHLKKLEKDKENPISEDELKKEETNVQTLTDKYVKEIDDL 179
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_FINM2 (Ribosome-recycling factor OS=Finegoldia magna (strain ATCC 29328) GN=frr PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 2.369e-40 Identity = 79/167 (47.31%), Postives = 120/167 (71.86%), Query Frame = -3 Query: 179 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 679 D++ + ++T+ ++ +VR GR+NP++LD I VEYYG+ LK +A I+ P++ L IQP+DKS +K IEK I +S+LG+TP+NDG +IRL PQLT +RRKEL+KVV + E+ KV +R+IRRD + +K++K ++SED + L D+Q LTD+ K+ID+I Sbjct: 8 DMETKADKTLHALKEELKTVRAGRANPSILDNIMVEYYGTSTPLKQVATISAPEARLLTIQPWDKSIMKEIEKQIQASNLGITPSNDGTIIRLPFPQLTEDRRKELTKVVKEYGEKSKVTIRSIRRDFVDDAKKMEKNAEISEDELHVLLDDIQSLTDKLTKEIDNI 174
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_CLONN (Ribosome-recycling factor OS=Clostridium novyi (strain NT) GN=frr PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 2.369e-40 Identity = 76/163 (46.63%), Postives = 119/163 (73.01%), Query Frame = -3 Query: 179 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 667 +M ++I +++ + S++ G++NPAMLD++ VEYYGS + +A +++P+ LLIQP+DK+SLK IEKAI+ SDLG+ P+NDG VIRL +P+LT E RK++ K V K EE K+A+R+IRR+ + L+K ++ED K+ S +QK+TD+Y+ +ID+I Sbjct: 12 KMLKSISVLKKDLGSMKAGKANPAMLDRVNVEYYGSETPINQLANVSSPEPRVLLIQPWDKNSLKDIEKAILQSDLGLNPSNDGSVIRLIIPELTEETRKDIVKKVKKIGEESKIAIRSIRREGNDKIKNLKKNNDITEDEAKEGESSVQKITDKYITEIDNI 174
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_ACIC1 (Ribosome-recycling factor OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) GN=frr PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 2.369e-40 Identity = 78/169 (46.15%), Postives = 116/169 (68.64%), Query Frame = -3 Query: 173 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYK 679 + + +ME+ ++ R NF ++RTGR+NPA+ KI VEYYG+P L +A D+ ++I PYDK SL++IEKAI SDLG+ P +DG VIR+ +P LT ERR++ K+ +AEE +VA+RNIRR A A +KLQK+ ++ ED+V+ +L +LT +Y+ ID + K Sbjct: 8 EAEEKMEKATNVARENFAAIRTGRANPALFSKITVEYYGTPTPLNQLASFTVADARLIVIHPYDKGSLRAIEKAIRDSDLGVNPTDDGSVIRVAIPPLTEERRRDYIKMARHEAEEARVAIRNIRRHAKDALDKLQKDGEVGEDDVRRAEKELDELTHKYVAHIDEMLK 176
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_SHESH (Ribosome-recycling factor OS=Shewanella sediminis (strain HAW-EB3) GN=frr PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 3.094e-40 Identity = 78/167 (46.71%), Postives = 117/167 (70.06%), Query Frame = -3 Query: 179 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 679 D K+RME+ ++ +T VRTGR++P++LD I+V YYGS LK + ++ DS +L + +D + ++++EKAI+SSDLG+ P + G IR+ LP LT ERRK+L KVV +AE G++AVRN+RRDA + L+KEK+ +ED+V+ D+QK TD ++K ID I Sbjct: 8 DAKSRMEKCVESTKTQMAKVRTGRAHPSLLDTIKVSYYGSMTPLKQVGNVSIEDSRTLAVNVFDSTMIQAVEKAIMSSDLGLNPMSAGATIRIPLPALTEERRKDLIKVVRAEAENGRIAVRNVRRDANSDVKSLEKEKECTEDDVRRTEDDVQKFTDAHIKLIDEI 174
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_PROAC (Ribosome-recycling factor OS=Propionibacterium acnes GN=frr PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 3.094e-40 Identity = 76/169 (44.97%), Postives = 117/169 (69.23%), Query Frame = -3 Query: 173 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYK 679 D + +M +D R F ++RTGR+NPAM +K+ VEYYG+P L+ +A P++ ++LI P+DKS + +EKAI SDLG+ P+NDG V+R LP LT ERRKE K+ +AEEG++AVRN+RR + +K +K+K++SED + L +L ++T +Y+++ID + K Sbjct: 7 DAEKKMGSAVDHAREEFAAIRTGRANPAMFNKLMVEYYGTPTPLQQLASFQVPEARTVLIAPFDKSCVNDVEKAIRDSDLGVNPSNDGNVVRCVLPALTEERRKEYIKMAKTKAEEGRIAVRNVRRASNDVVKKQEKDKEISEDEMTRLEKELDQVTRKYVEQIDELLK 175
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_HAES2 (Ribosome-recycling factor OS=Haemophilus somnus (strain 2336) GN=frr PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 3.094e-40 Identity = 73/167 (43.71%), Postives = 121/167 (72.46%), Query Frame = -3 Query: 179 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 679 D + RME++++ +RT+ +RTGR+ P++LD I+VEYYGSP L+ +A + D+ +L + +D+S + ++EKAI++SDLG+ P++ G IR+ LP LT ERR++L K+V + E+GK+A+RN+RRDA + L K+K++SED + ++QK+TD ++KK+D I Sbjct: 8 DTQQRMEKSLETLRTHIAKIRTGRAQPSLLDGIQVEYYGSPTPLRQLANVVAEDARTLAVTVFDRSLISAVEKAILTSDLGLNPSSAGTTIRVPLPPLTEERRRDLIKIVKGEGEQGKIAIRNVRRDANDQIKALLKDKEISEDEERKAQDEIQKITDTFVKKVDEI 174
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_HAES1 (Ribosome-recycling factor OS=Haemophilus somnus (strain 129Pt) GN=frr PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 3.094e-40 Identity = 73/167 (43.71%), Postives = 121/167 (72.46%), Query Frame = -3 Query: 179 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 679 D + RME++++ +RT+ +RTGR+ P++LD I+VEYYGSP L+ +A + D+ +L + +D+S + ++EKAI++SDLG+ P++ G IR+ LP LT ERR++L K+V + E+GK+A+RN+RRDA + L K+K++SED + ++QK+TD ++KK+D I Sbjct: 8 DTQQRMEKSLETLRTHIAKIRTGRAQPSLLDGIQVEYYGSPTPLRQLANVVAEDARTLAVTVFDRSLISAVEKAILTSDLGLNPSSAGTTIRVPLPPLTEERRRDLIKIVKGEGEQGKIAIRNVRRDANDQIKALLKDKEISEDEERKAQDEIQKITDTFVKKVDEI 174 The following BLAST results are available for this feature:
BLAST of CV712550 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712550 ID=CV712550; Name=CV712550; organism=Citrus sinensis; type=EST; length=846bpback to top |