CV712522
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712522 vs. ExPASy Swiss-Prot
Match: NU4C_NASOF (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Nasturtium officinale GN=ndhD PE=3 SV=2) HSP 1 Score: 419.853 bits (1078), Expect = 7.845e-117 Identity = 211/255 (82.75%), Postives = 224/255 (87.84%), Query Frame = -2 Query: 3 RSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYGYKLFNAPNSYFFDS 767 +SYPV LE AVK PIIP HTWLPDTHGEAHYSTCMLLAGILLKMGAYGL+RINMELLPHAHS+FSPW M+VGT+QIIYAASTSPGQRNLKKRIAYSSVSHMGFII+GI SITD GLNGA+LQIISHG I AALFFLAGTSYDRIR YLDEMGG+AI IPKIFT+F+ILSMASLALPGMSGFVAELIVFFGIITSQK+FL+ KI+I FVMAIGMILTPIY LSM RQMFYGYKL N N FFDS Sbjct: 203 QSYPVTLEILFYIGFLIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPHAHSMFSPWLMVVGTIQIIYAASTSPGQRNLKKRIAYSSVSHMGFIIIGISSITDPGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGMAISIPKIFTMFTILSMASLALPGMSGFVAELIVFFGIITSQKYFLISKILIIFVMAIGMILTPIYLLSMSRQMFYGYKLINVKNFSFFDS 457
BLAST of CV712522 vs. ExPASy Swiss-Prot
Match: NU4C_DIOEL (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Dioscorea elephantipes GN=ndhD PE=3 SV=1) HSP 1 Score: 418.698 bits (1075), Expect = 1.748e-116 Identity = 209/255 (81.96%), Postives = 226/255 (88.63%), Query Frame = -2 Query: 3 RSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYGYKLFNAPNSYFFDS 767 +SYPVALE AVK PIIP HTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHS+FSPW +IVGT+QIIYAASTS GQRNLKKRIA SSVSHMGFII+GIGSITDTGLNGA+LQI+SHG I AALFFL+GTS DRIRF YLDEMGG+++P+PKIFT+FS SMASLALPGMSGFVAEL+VF GIITS K+ LMPKI+ITFVMAIGMILTPIY LSM RQMFYGYKLFN PNS+F DS Sbjct: 204 QSYPVALEIIFYFGFLIAYAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSLFSPWLVIVGTIQIIYAASTSFGQRNLKKRIACSSVSHMGFIIIGIGSITDTGLNGAILQILSHGFIGAALFFLSGTSCDRIRFVYLDEMGGISLPMPKIFTMFSSFSMASLALPGMSGFVAELVVFLGIITSPKYLLMPKILITFVMAIGMILTPIYLLSMSRQMFYGYKLFNVPNSFFVDS 458
BLAST of CV712522 vs. ExPASy Swiss-Prot
Match: NU4C_CAPBU (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Capsella bursa-pastoris GN=ndhD PE=3 SV=2) HSP 1 Score: 418.313 bits (1074), Expect = 2.282e-116 Identity = 210/255 (82.35%), Postives = 224/255 (87.84%), Query Frame = -2 Query: 3 RSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYGYKLFNAPNSYFFDS 767 +SYPV LE AVK PIIP HTWLPDTHGEAHYSTCMLLAGILLKMGAYGL+RINMELLPHAHS+FSPW M+VGT+QIIYAASTSPGQRNLKKRIAYSSVSHMGFII+GI SITD GLNGA+LQIISHG I AALFFLAGTSYDRIR YLDEMGG+AI IPKIFT+F+ILSMASLALPGMSGF+AELIVFFGIITSQK+FL+ KI+I FVMAIGMILTPIY LSM RQMFYGYKL N N FFDS Sbjct: 203 QSYPVTLEILFYIGFLIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPHAHSMFSPWLMVVGTIQIIYAASTSPGQRNLKKRIAYSSVSHMGFIIIGISSITDPGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGMAISIPKIFTMFTILSMASLALPGMSGFIAELIVFFGIITSQKYFLIFKILIIFVMAIGMILTPIYLLSMSRQMFYGYKLINVKNFSFFDS 457
BLAST of CV712522 vs. ExPASy Swiss-Prot
Match: NU4C_ARATH (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Arabidopsis thaliana GN=ndhD PE=2 SV=3) HSP 1 Score: 418.313 bits (1074), Expect = 2.282e-116 Identity = 209/255 (81.96%), Postives = 223/255 (87.45%), Query Frame = -2 Query: 3 RSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYGYKLFNAPNSYFFDS 767 +SYPV LE AVK PIIP HTWLPDTHGEAHYSTCMLLAGILLKMGAYGL+RINMELLPHAHS+FSPW ++VGT+QIIYAASTSPGQRNLKKRIAYSSVSHMGFII+GI SITD GLNGA+LQIISHG I AALFFLAGTSYDRIR YLDEMGG+AI IPKIFT+F+ILSMASLALPGMSGF+AE IVFFGIITSQK+FL+ KI I FVMAIGMILTPIY LSMLRQMFYGYKL N N FFDS Sbjct: 203 KSYPVTLEILFYIGFLIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPHAHSMFSPWLLVVGTIQIIYAASTSPGQRNLKKRIAYSSVSHMGFIIIGISSITDPGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGMAISIPKIFTMFTILSMASLALPGMSGFIAEFIVFFGIITSQKYFLISKIFIIFVMAIGMILTPIYLLSMLRQMFYGYKLINIKNFSFFDS 457
BLAST of CV712522 vs. ExPASy Swiss-Prot
Match: NU4C_SOYBN (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Glycine max GN=ndhD PE=3 SV=1) HSP 1 Score: 417.927 bits (1073), Expect = 2.981e-116 Identity = 208/255 (81.57%), Postives = 227/255 (89.02%), Query Frame = -2 Query: 3 RSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYGYKLFNAPNSYFFDS 767 +SYPVALE AVK PIIP HTWLPDTHGEAHYSTCMLLAGILLKMGAYGL+RINME L AHSIFSPW +++G++QIIYAASTS GQRNLKKRIAYSSVSHMGF++LGIGSI+DTGLNGA+LQIISHG I AALFFLAGTSYDR+R YLDEMGG+AIP+PKIFT+F+ILSMASLALPGMSGFVAELIV GIITSQK+ L+ KI+ITFV AIGMILTPIYSLSMLRQMFYGYKLFN PNSYFFDS Sbjct: 203 QSYPVALEIIFYIGFLIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMEFLSRAHSIFSPWLILLGSIQIIYAASTSLGQRNLKKRIAYSSVSHMGFLLLGIGSISDTGLNGAILQIISHGFIGAALFFLAGTSYDRLRLLYLDEMGGMAIPMPKIFTVFTILSMASLALPGMSGFVAELIVLLGIITSQKYLLITKILITFVTAIGMILTPIYSLSMLRQMFYGYKLFNTPNSYFFDS 457
BLAST of CV712522 vs. ExPASy Swiss-Prot
Match: NU4C_CRUWA (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Crucihimalaya wallichii GN=ndhD PE=3 SV=2) HSP 1 Score: 417.927 bits (1073), Expect = 2.981e-116 Identity = 210/255 (82.35%), Postives = 223/255 (87.45%), Query Frame = -2 Query: 3 RSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYGYKLFNAPNSYFFDS 767 +SYPV LE AVK PIIP HTWLPDTHGEAHYSTCMLLAGILLKMGAYGL+RINMELLPHAHS+FSPW M+VGT+QIIYAASTSPGQRNLKKRIAYSSVSHMGFII+GI SITD GLNGA+LQIISHG I AALFFLAGTSYDRIR YLDEMGG+AI IPKIFT+F+ILSMASLALPGMSGFVAELIVFFGIITSQK+F++ KI I FVMAIGMILTPIY LSM RQMFYGYKL N N FFDS Sbjct: 203 QSYPVTLEILFYIGFLIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPHAHSMFSPWLMVVGTIQIIYAASTSPGQRNLKKRIAYSSVSHMGFIIIGISSITDPGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGMAISIPKIFTMFTILSMASLALPGMSGFVAELIVFFGIITSQKYFVISKIFIIFVMAIGMILTPIYLLSMSRQMFYGYKLINVKNFSFFDS 457
BLAST of CV712522 vs. ExPASy Swiss-Prot
Match: NU4C_BARVE (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Barbarea verna GN=ndhD PE=3 SV=2) HSP 1 Score: 417.927 bits (1073), Expect = 2.981e-116 Identity = 210/255 (82.35%), Postives = 223/255 (87.45%), Query Frame = -2 Query: 3 RSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYGYKLFNAPNSYFFDS 767 +SYPV LE AVK PIIP HTWLPDTHGEAHYSTCMLLAGILLKMGAYGL+RINMELLPHAHS+FSPW M+VGT+QIIYAASTSPGQRNLKKRIAYSSVSHMGFII+GI SITD GLNGA+LQIISHG I AALFFLAG SYDRIR YLDEMGG+AI IPKIFT+F+ILSMASLALPGMSGFVAELIVFFGIITSQK+FL+ KI+I FVMAIGMILTPIY LSM RQMFYGYKL N N FFDS Sbjct: 203 QSYPVTLEILFYIGFLIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPHAHSMFSPWLMVVGTIQIIYAASTSPGQRNLKKRIAYSSVSHMGFIIIGISSITDPGLNGAILQIISHGFIGAALFFLAGASYDRIRLVYLDEMGGMAISIPKIFTMFTILSMASLALPGMSGFVAELIVFFGIITSQKYFLISKILIIFVMAIGMILTPIYLLSMSRQMFYGYKLINVKNFSFFDS 457
BLAST of CV712522 vs. ExPASy Swiss-Prot
Match: NU4C_JASNU (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Jasminum nudiflorum GN=ndhD PE=3 SV=1) HSP 1 Score: 417.542 bits (1072), Expect = 3.893e-116 Identity = 208/255 (81.57%), Postives = 225/255 (88.24%), Query Frame = -2 Query: 3 RSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYGYKLFNAPNSYFFDS 767 +SYPVALE AVKLPIIP HTWLPDTHGEAHYSTCMLLAGILLKMGAYGL+RINMELL HAHS+FSPW MIVG +QIIYAASTS GQRNLKKRIAYSSVSHMGF+I+GIGSITD GL+GA+LQIISHG I AALFFLAGT+YDRIR YLDEMGG+AIP+PKIFT+FSI SMASLALPGMSGFV E IVFFG+ITS K+ LM KI+I FVMAIG+ILTPIYSLSM RQMFYGYK+FNAPNSYF DS Sbjct: 203 QSYPVALERIFYIGFFIAFAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLSHAHSLFSPWLMIVGAMQIIYAASTSLGQRNLKKRIAYSSVSHMGFLIIGIGSITDIGLDGALLQIISHGFIGAALFFLAGTTYDRIRLVYLDEMGGIAIPMPKIFTMFSIFSMASLALPGMSGFVTEFIVFFGLITSPKYLLMAKILIPFVMAIGIILTPIYSLSMSRQMFYGYKIFNAPNSYFLDS 457
BLAST of CV712522 vs. ExPASy Swiss-Prot
Match: NU4C_ILLOL (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Illicium oligandrum GN=ndhD PE=3 SV=1) HSP 1 Score: 417.157 bits (1071), Expect = 5.085e-116 Identity = 207/255 (81.18%), Postives = 223/255 (87.45%), Query Frame = -2 Query: 3 RSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYGYKLFNAPNSYFFDS 767 +SYPVALE A K PIIP HTWLPDTHGEAHYSTCMLLAGILLKMGAYGL+RINMELLPHAHSIFSPW MI+G +QIIYAASTSPGQRNLKKRIAYSSVSHMGFI +GIGSITDTGLNG++LQIISHG I AALFFLAGT+YDRIR YLDEMGG+AI +PK+F +FS SMASLALPGMSGFVAE +VF GIITS K+FLMPKI+ITFVMAIGMILTPIYSLSM RQ+FYGYKLFN NSYF DS Sbjct: 203 QSYPVALEIIFYIGFFIAYAAKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPHAHSIFSPWLMIIGAIQIIYAASTSPGQRNLKKRIAYSSVSHMGFITIGIGSITDTGLNGSILQIISHGFIGAALFFLAGTTYDRIRLVYLDEMGGIAILMPKMFMMFSSFSMASLALPGMSGFVAESVVFLGIITSPKYFLMPKILITFVMAIGMILTPIYSLSMSRQIFYGYKLFNVSNSYFVDS 457
BLAST of CV712522 vs. ExPASy Swiss-Prot
Match: NU4C_DRANE (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Draba nemorosa GN=ndhD PE=3 SV=2) HSP 1 Score: 416.387 bits (1069), Expect = 8.673e-116 Identity = 208/255 (81.57%), Postives = 223/255 (87.45%), Query Frame = -2 Query: 3 RSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYGYKLFNAPNSYFFDS 767 +SYPV LE VK PIIP HTWLPDTHGEAHYSTCMLLAGILLKMGAYGL+RINMELLPHAHS+FSPW M VGT+QIIYAASTSPGQRNLKKRIAYSSVSHMGFII+GIGSITD GLNGA+LQIISHG I AALFFLAGTSYDR+R YLDEMGG+AI IPKIFT+F+ILSMASLALPGMSGFVAELIVFFGIITSQK+F++ KI+I FVMAIG+ILTPIY LSM RQMFYGYKL N N FFDS Sbjct: 203 QSYPVTLEILFYIGFVIALTVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPHAHSLFSPWLMAVGTIQIIYAASTSPGQRNLKKRIAYSSVSHMGFIIIGIGSITDPGLNGAILQIISHGFIGAALFFLAGTSYDRMRLVYLDEMGGMAISIPKIFTMFTILSMASLALPGMSGFVAELIVFFGIITSQKYFVISKILIIFVMAIGIILTPIYLLSMSRQMFYGYKLSNVKNLSFFDS 457 The following BLAST results are available for this feature:
BLAST of CV712522 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 487
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712522 ID=CV712522; Name=CV712522; organism=Citrus sinensis; type=EST; length=768bpback to top |