CV712522
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712522 vs. ExPASy Swiss-Prot
Match: NU5M_ACACA (NADH-ubiquinone oxidoreductase chain 5 OS=Acanthamoeba castellanii GN=ND5 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.794e-11 Identity = 58/231 (25.11%), Postives = 105/231 (45.45%), Query Frame = -2 Query: 15 HTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDE-----MGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVF---FGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYGYKLFNAPNSY 683 HTWLPD + ++ A ++ G + LIR + L + +F ++G + ++A + Q ++KK IAYS+ S +G++ G + + + + +HG A LF AG+ + A LDE MGGL +P + + S++ P ++GF ++ +V F + FF I ++ +T YS+ ++ +F F PNS+ Sbjct: 240 HTWLPDAMEGPTPVSALIHAATMVTAGVFVLIRSSPILEYSSTGLFL--VSLIGGLTALFAGTVGLVQYDIKKVIAYSTCSQLGYMFFACGM---SNYSVGLFHLFNHGFFKALLFLGAGS----VIHALLDEQDMRKMGGLIKLMPLTYVAILVGSLSLTGFPFLTGFYSKEVVLEIAFSKFSINSFF------IYWLGVFAAFITSFYSIRLMYLVF-----FARPNSH 450
BLAST of CV712522 vs. ExPASy Swiss-Prot
Match: NUON_HELMI (NADH-quinone oxidoreductase subunit N OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=nuoN PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.567e-11 Identity = 50/204 (24.51%), Postives = 97/204 (47.55%), Query Frame = -2 Query: 102 KLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWFMIVGT---VQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAI 704 K+ +PFH W PD + A LA G L+R+ +E +P + W ++ V ++ + Q N+K+ +AYSSV+ G++++G+ S G+ G + + + + + F +A I + + GL+ P + ++ +I ++ +P ++GFV +L +F I+ K L P + FVM++ Sbjct: 211 KISAVPFHMWSPDIYEGAPTPVTGFLAAASKAAGFAVLVRLFLEGMPLQGG--ADWLTVIAVLAGVTMVIGNVVAIPQTNIKRMLAYSSVAQAGYLLVGLMSTDAPGVKGILFYAMLYVVANMGAFAVATAVGRAIGSDEIADYAGLSQRQPLLASVMTISLLSLAGIPPLAGFVGKLYLFSAIM--DKGVLWPAF-LGFVMSM 409
BLAST of CV712522 vs. ExPASy Swiss-Prot
Match: NUON_PARDP (NADH-quinone oxidoreductase subunit N OS=Paracoccus denitrificans (strain Pd 1222) GN=nuoN PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.883e-11 Identity = 52/222 (23.42%), Postives = 99/222 (44.59%), Query Frame = -2 Query: 45 KLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLI-RINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALF-FLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYG 704 K+ +PFH W PD + E + K+ A LI R+ + H +S + + + + GQ N+K+ +AYSS++HMGF ++G+ + T G+ +L + + +++ F F+ D + L + A P +L + +P GF A+ FG++T+ M + + V+A ++ Y L ++ M++G Sbjct: 217 KVSAVPFHMWTPDVY-EGSPTPVTAFFATAPKVAAMALIARLVFDAFGHVIGDWSQIVAALAVMSMFLGSIAGIGQTNIKRLMAYSSIAHMGFALVGLAAGTAIGVQNMLLYMTIYAVMNIGTFAFILSMERDGVPVTDLAALNRFAWTDPVKALAMLVLMFSLAGVPPTLGFFAK----FGVLTAAVDAGMGWLAVLGVIA--SVIGAFYYLRIVYYMYFG 431
BLAST of CV712522 vs. ExPASy Swiss-Prot
Match: NUON_CUPTR (NADH-quinone oxidoreductase subunit N OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=nuoN PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.883e-11 Identity = 62/233 (26.61%), Postives = 109/233 (46.78%), Query Frame = -2 Query: 48 KLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGL-IRINME-LLPHAHSIFSPWFMIVGTVQIIYAAS---TSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLA--GT-------SYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFY 704 KL PFH W+PD + + + +L+AG K+ A+ L IR+ +E LLP A S W M++ + II A T+ Q NLK+ +AYS++SHMGF++LG+ S S + + + L GT + L+++ G++ P L ++ + +P GF A+L V ++ + +L V + ++ Y L +++ M++ Sbjct: 220 KLGAAPFHMWIPDIYQGSPTAVTLLIAGGP-KVAAFALFIRVLVEGLLPLA----SDWQMMLVVLSIISLAIGNLTAIVQSNLKRMLAYSTISHMGFVLLGLLSGVVANKADGAADAYSSAMFYSVTYLLTTLGTFGIILLRTSKGFEAETLEDLKGMSRRNPWFAFLMLVMMFSLAGIPPTVGFYAKLAVLDAVVQAGMTWL------AVVAVLFSLIGAFYYLRIVKLMYF 441
BLAST of CV712522 vs. ExPASy Swiss-Prot
Match: NUON2_ROSCS (NADH-quinone oxidoreductase subunit N 2 OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=nuoN2 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.883e-11 Identity = 54/226 (23.89%), Postives = 96/226 (42.48%), Query Frame = -2 Query: 51 KLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGI-------GSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAY-LDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMF 704 K+ + PFH W PD + A LL+ G L+R +E L I++P ++ + + QRN+K+ +AYSS+ H G+I+ G+ G G+ G +L +I++ + F + R A+ + ++ GL P + ++ ++ +P GF + VF S + IT + I + Y L ++ QMF Sbjct: 231 KVAMAPFHMWAPDVYEGAPTPIAGLLSVGSKAAGFAALLRFLVEALAGEWQIWAPVLAVLAIATLAVGNIGALTQRNVKRMLAYSSIGHAGYILFGVIAAGAPGGIAGQRGVEGVLLYLIAYTFTNLGAFGVLIALEHRGEAAWDMSDLAGLWSRRPWLAVAMAVCMLSLAGVPPTGGFWGKFYVFTAAWLSGMGW------ITVIGVIVAAIAAFYYLRIVAQMF 450
BLAST of CV712522 vs. ExPASy Swiss-Prot
Match: NUON2_CHLT3 (NADH-quinone oxidoreductase subunit N 2 OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) GN=nuoN2 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.883e-11 Identity = 50/218 (22.94%), Postives = 95/218 (43.58%), Query Frame = -2 Query: 72 KLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHS----IFSPW---FMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSL 704 K ++PFH W PD + A L+ G LIR +P + W +V V ++ + Q N+K+ +AYSS++H G+I+LG+ D G + + ++ +++ FF+ + I +++ GL +P +I ++ LP GF+ +L++F ++ F+ +A+ +LT + SL Sbjct: 236 KAGVVPFHFWSPDVYEGAPTPITAYLSVGSKAAGFAMLIRFFRVTIPTGAGSTDLLAFDWVTLLSVVSVVSMVLGNVVALWQSNVKRLLAYSSIAHAGYILLGVIVADDLGTQATLFYLAAYTIMNIGAFFVIILISNEIGSDDVNDYKGLGKKMPLAAASLTIFLVSLTGLPPTVGFIGKLMIFSALLAKGPVFVW--------LAVIGVLTSVVSL 445
BLAST of CV712522 vs. ExPASy Swiss-Prot
Match: NQO14_PARDE (NADH-quinone oxidoreductase subunit 14 OS=Paracoccus denitrificans GN=nqo14 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.883e-11 Identity = 52/222 (23.42%), Postives = 99/222 (44.59%), Query Frame = -2 Query: 45 KLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLI-RINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALF-FLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYG 704 K+ +PFH W PD + E + K+ A LI R+ + H +S + + + + GQ N+K+ +AYSS++HMGF ++G+ + T G+ +L + + +++ F F+ D + L + A P +L + +P GF A+ FG++T+ M + + V+A ++ Y L ++ M++G Sbjct: 217 KVSAVPFHMWTPDVY-EGSPTPVTAFFATAPKVAAMALIARLVFDAFGHVIGDWSQIVAALAVMSMFLGSIAGIGQTNIKRLMAYSSIAHMGFALVGLAAGTAIGVQNMLLYMTIYAVMNIGTFAFILSMERDGVPVTDLAALNRFAWTDPVKALAMLVLMFSLAGVPPTLGFFAK----FGVLTAAVDAGMGWLAVLGVIA--SVIGAFYYLRIVYYMYFG 431 The following BLAST results are available for this feature:
BLAST of CV712522 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 487
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712522 ID=CV712522; Name=CV712522; organism=Citrus sinensis; type=EST; length=768bpback to top |