CV712522
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712522 vs. ExPASy Swiss-Prot
Match: NU4C_LOTJA (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Lotus japonicus GN=ndhD PE=3 SV=1) HSP 1 Score: 416.001 bits (1068), Expect = 1.133e-115 Identity = 205/255 (80.39%), Postives = 227/255 (89.02%), Query Frame = -2 Query: 3 RSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYGYKLFNAPNSYFFDS 767 +SYP+ALE AVK PIIP HTWLPDTHGEAHYSTCMLLAGILLKMGAYGL+RINMEL HAHSIF PW MI+G++QIIYAAS S GQRNLKKRIAYSSVSHMGF+I+GIGSI+DTGLNGA+LQIISHG I AALFFL+GTSYDR+R YLDEMGG+A+P+PKIFT+F+ILSMASLALPGMSGF AELIVF+GIITSQK+FL+ KI+ITFV AIGMILTPIYSLS+LRQMFYGYK FN PNSYFFDS Sbjct: 203 QSYPLALEIIVYIGFLIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELFSHAHSIFCPWLMILGSIQIIYAASASLGQRNLKKRIAYSSVSHMGFLIIGIGSISDTGLNGAILQIISHGFIGAALFFLSGTSYDRLRLLYLDEMGGMALPMPKIFTVFTILSMASLALPGMSGFFAELIVFWGIITSQKYFLIMKILITFVTAIGMILTPIYSLSILRQMFYGYKFFNTPNSYFFDS 457
BLAST of CV712522 vs. ExPASy Swiss-Prot
Match: NU4C_NUPAD (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Nuphar advena GN=ndhD PE=3 SV=2) HSP 1 Score: 414.461 bits (1064), Expect = 3.296e-115 Identity = 207/255 (81.18%), Postives = 224/255 (87.84%), Query Frame = -2 Query: 3 RSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYGYKLFNAPNSYFFDS 767 +SYPVALE AVK PIIP HTWLPDTHGEAHYSTCMLLAGILLKMGAYGL+RINMELLPHAHSIFSPW MIVGT+QIIYAASTS GQRNLKKRIAYSSVSHMGFII+GI SITD GLNGA+LQIISHG I AALFFLAGTSYDRIR YL+EMGG+AI +P+IFT+FS SMASLALPGMSGFVAEL++F GIITS K+ ++ KI+ITFVMAIGMILTPIYSLSM RQMFYGY+LFN PNSYF DS Sbjct: 203 QSYPVALEIIFYFGFLIAYAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPHAHSIFSPWLMIVGTIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGISSITDAGLNGAILQIISHGFIGAALFFLAGTSYDRIRLRYLNEMGGIAILMPRIFTMFSSFSMASLALPGMSGFVAELVIFLGIITSPKYLVVSKILITFVMAIGMILTPIYSLSMSRQMFYGYRLFNVPNSYFVDS 457
BLAST of CV712522 vs. ExPASy Swiss-Prot
Match: NU4C_RANMC (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Ranunculus macranthus GN=ndhD PE=3 SV=1) HSP 1 Score: 414.075 bits (1063), Expect = 4.305e-115 Identity = 210/255 (82.35%), Postives = 224/255 (87.84%), Query Frame = -2 Query: 3 YPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYGYK--LFNAPNSYFFDS 761 YPVALE AVKLPIIP HTWLPDTHGEAHYSTCMLLAGILLKMGAYGL+RINMELLPHAHSIFSPW +IVG +QIIYAASTS GQRNLKKRIAYSSVSHMGFII+GI SITDTGLNGA+LQ+ISHG I AALFFLAGTSYDRIR YLDEMGG+AIP+PKIFT+FS SMASLALPGMSGF AEL+VFFG+ITSQK+ LMPKI+ITFV AIGMILTPIYSLSMLRQMFYGYK F + NS FFDS Sbjct: 205 YPVALEILFYFGFLIGYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPHAHSIFSPWLIIVGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGICSITDTGLNGAILQMISHGFIGAALFFLAGTSYDRIRLVYLDEMGGIAIPMPKIFTMFSSFSMASLALPGMSGFAAELVVFFGLITSQKYLLMPKILITFVTAIGMILTPIYSLSMLRQMFYGYKQFKFKSLNSSFFDS 459
BLAST of CV712522 vs. ExPASy Swiss-Prot
Match: NU4C_ACOCL (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Acorus calamus GN=ndhD PE=2 SV=1) HSP 1 Score: 414.075 bits (1063), Expect = 4.305e-115 Identity = 205/255 (80.39%), Postives = 224/255 (87.84%), Query Frame = -2 Query: 3 RSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYGYKLFNAPNSYFFDS 767 +SYPV+LE AVKLPIIP HTWLPDTHGEAHYSTCMLLAGILLKMGAYGL+RINMELLPHAHSIFSPW ++ GT+QIIYAASTS GQ NLKKRIAYSSVSHMGF I+GIGSITDTGLNGA+LQ++SHG + AALFFLAGTS DRIR YLDEMGG++IP+PKIFT+FS SMASLALPGMSGFVAE +VFFGIITSQKF +PKI+ITFVMAIGMILTPIY LSMLRQ+FYGYKLFN NSYF DS Sbjct: 203 QSYPVSLEILFYFGFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPHAHSIFSPWLVLAGTLQIIYAASTSLGQVNLKKRIAYSSVSHMGFTIIGIGSITDTGLNGAILQLLSHGFLGAALFFLAGTSCDRIRLIYLDEMGGISIPMPKIFTMFSSFSMASLALPGMSGFVAEAVVFFGIITSQKFLFLPKILITFVMAIGMILTPIYLLSMLRQIFYGYKLFNMTNSYFMDS 457
BLAST of CV712522 vs. ExPASy Swiss-Prot
Match: NU4C_ACOAM (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Acorus americanus GN=ndhD PE=3 SV=1) HSP 1 Score: 414.075 bits (1063), Expect = 4.305e-115 Identity = 205/255 (80.39%), Postives = 224/255 (87.84%), Query Frame = -2 Query: 3 RSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYGYKLFNAPNSYFFDS 767 +SYPV+LE AVKLPIIP HTWLPDTHGEAHYSTCMLLAGILLKMGAYGL+RINMELLPHAHSIFSPW ++ GT+QIIYAASTS GQ NLKKRIAYSSVSHMGF I+GIGSITDTGLNGA+LQ++SHG + AALFFLAGTS DRIR YLDEMGG++IP+PKIFT+FS SMASLALPGMSGFVAE +VFFGIITSQKF +PKI+ITFVMAIGMILTPIY LSMLRQ+FYGYKLFN NSYF DS Sbjct: 203 QSYPVSLEILFYFGFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPHAHSIFSPWLVLAGTLQIIYAASTSLGQVNLKKRIAYSSVSHMGFTIIGIGSITDTGLNGAILQLLSHGFLGAALFFLAGTSCDRIRLIYLDEMGGISIPMPKIFTMFSSFSMASLALPGMSGFVAEAVVFFGIITSQKFLFLPKILITFVMAIGMILTPIYLLSMLRQIFYGYKLFNMTNSYFMDS 457
BLAST of CV712522 vs. ExPASy Swiss-Prot
Match: NU4C_AETGR (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Aethionema grandiflora GN=ndhD PE=3 SV=2) HSP 1 Score: 413.305 bits (1061), Expect = 7.342e-115 Identity = 208/255 (81.57%), Postives = 221/255 (86.67%), Query Frame = -2 Query: 3 RSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYGYKLFNAPNSYFFDS 767 +SYPV LE AVK P+IP HTWLPDTHGEAHYSTCMLLAGILLKMGAYGL+RINMELLPHAHS+FSPW M+VGT+QIIYAASTSPGQRNLKKRIAYSSVSHMGFII+GI SITD GLNGA+LQIISHG I AALFFLAGTSYDRIR LDEMGG+AI IPKIFT+F+ILSMASLALPGMSGFVAE IVFFGIITSQK+ LM KI+I FVMAIGMILTPIY LSM RQMFYGYKL N N FFDS Sbjct: 203 QSYPVTLEIILYIGFLIAFAVKSPLIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPHAHSMFSPWLMVVGTIQIIYAASTSPGQRNLKKRIAYSSVSHMGFIIIGIASITDPGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVSLDEMGGMAISIPKIFTMFTILSMASLALPGMSGFVAEFIVFFGIITSQKYLLMAKILIIFVMAIGMILTPIYLLSMSRQMFYGYKLINVQNFSFFDS 457
BLAST of CV712522 vs. ExPASy Swiss-Prot
Match: NU4C_PHAVU (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Phaseolus vulgaris GN=ndhD PE=2 SV=2) HSP 1 Score: 412.92 bits (1060), Expect = 9.589e-115 Identity = 205/255 (80.39%), Postives = 226/255 (88.63%), Query Frame = -2 Query: 3 RSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYGYKLFNAPNSYFFDS 767 +SYPVALE AVK PIIP HTWLPDTHGEAHYSTCMLLAGILLKMGAYGL+RINMELL AHSIF PW M++G++QIIYAASTS GQRN+KKRIAYSSVSHMGF+ILGIGSI++TGLNGA+LQIISHG I AALFFLAGTSYDR+R YLDEMGG+AIP+PKIFT+F+ LSMASLALPGMSGFVAELIV GIIT+QK+ L+ KI+ITFV AIGMILTPIYSLS+LRQMFYGYKLFN PNSYFFDS Sbjct: 203 QSYPVALEIIFYMGFLIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLSRAHSIFCPWLMLLGSIQIIYAASTSLGQRNVKKRIAYSSVSHMGFLILGIGSISETGLNGAILQIISHGFIGAALFFLAGTSYDRLRLLYLDEMGGMAIPMPKIFTIFTTLSMASLALPGMSGFVAELIVLLGIITNQKYLLITKILITFVTAIGMILTPIYSLSILRQMFYGYKLFNTPNSYFFDS 457
BLAST of CV712522 vs. ExPASy Swiss-Prot
Match: NU4C_NYMAL (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Nymphaea alba GN=ndhD PE=3 SV=1) HSP 1 Score: 411.379 bits (1056), Expect = 2.790e-114 Identity = 204/255 (80.00%), Postives = 222/255 (87.06%), Query Frame = -2 Query: 3 RSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYGYKLFNAPNSYFFDS 767 +SYPVALE AVK PIIP HTWLPDTHGEAHYSTCMLLAGILLKMGAYGL+R+NMELLPHAHSIFSPW MIVGT+QIIYAA TSPGQRNLKKRIAYSSVSHMGFII+GI SITD GLNGA+LQIISHG I AALFFLAGTSYDRIR YL+EMGG+AI +P+IFT+FS SMASLALPGMSGFVAE ++F GIITS K+ +M KI+ITFVMAIGMILTPIYSLSM RQMFYGY+LFN P S+F DS Sbjct: 203 QSYPVALEIIFYFGFLIAYAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRVNMELLPHAHSIFSPWLMIVGTIQIIYAALTSPGQRNLKKRIAYSSVSHMGFIIIGISSITDAGLNGAILQIISHGFIGAALFFLAGTSYDRIRLRYLNEMGGIAILMPRIFTMFSSFSMASLALPGMSGFVAEFVIFLGIITSPKYLVMSKILITFVMAIGMILTPIYSLSMSRQMFYGYRLFNVPKSHFVDS 457
BLAST of CV712522 vs. ExPASy Swiss-Prot
Match: NU4C_AMBTC (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Amborella trichopoda GN=ndhD PE=3 SV=1) HSP 1 Score: 410.223 bits (1053), Expect = 6.216e-114 Identity = 205/255 (80.39%), Postives = 220/255 (86.27%), Query Frame = -2 Query: 3 RSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYGYKLFNAPNSYFFDS 767 +SYPV LE A K PIIP HTWLPDTHGEAHYSTCMLLAGILLKMGAYGL+RINMELLPHAHS+FSPW +IVGT+QIIYAASTS GQRNLKKRIAYSSVSHMG I+GIGS+TDT LNGA+LQIISHG I AALFFLAGTSYDRIRF YLDEMGG+AIP+PKIFT+FSI SMASLA PGMSGFVAE +VF GIITS K+ +PKI+IT VMAIGMILTPIY LSM RQMFYGYKLFN PNSYF DS Sbjct: 203 QSYPVGLEILFYFGFLIAYAAKPPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPHAHSLFSPWLVIVGTLQIIYAASTSLGQRNLKKRIAYSSVSHMGSTIIGIGSMTDTALNGAILQIISHGFIGAALFFLAGTSYDRIRFLYLDEMGGIAIPMPKIFTMFSIFSMASLASPGMSGFVAEFLVFLGIITSPKYLFIPKILITVVMAIGMILTPIYLLSMSRQMFYGYKLFNVPNSYFVDS 457
BLAST of CV712522 vs. ExPASy Swiss-Prot
Match: NU4C_AETCO (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Aethionema cordifolium GN=ndhD PE=3 SV=2) HSP 1 Score: 410.223 bits (1053), Expect = 6.216e-114 Identity = 207/255 (81.18%), Postives = 219/255 (85.88%), Query Frame = -2 Query: 3 RSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYGYKLFNAPNSYFFDS 767 +SYPV LE AVK P+IP HTWLPDTHGEAHYSTCMLLAGILLKMGAYGL+RINMELLPHAHS+FSPW M+VGT+QIIYAASTSPGQRNLKKRIAYSSVSHMGFII+GI SITD GLNGA+LQIISHG I AALFFLAGTSYDRIR LDEMGG+AI IPKIFT+F+ILSMASLALPGMSGFVAE IVFFGIITSQK+ LM KI I VMAIGMILTPIY LSM RQMFYGYKL N N FFDS Sbjct: 203 QSYPVTLEIILYIGFLIAFAVKSPLIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPHAHSLFSPWLMVVGTIQIIYAASTSPGQRNLKKRIAYSSVSHMGFIIIGIASITDPGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVSLDEMGGMAISIPKIFTMFTILSMASLALPGMSGFVAEFIVFFGIITSQKYLLMAKIFIIVVMAIGMILTPIYLLSMSRQMFYGYKLINVQNFSFFDS 457 The following BLAST results are available for this feature:
BLAST of CV712522 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 487
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712522 ID=CV712522; Name=CV712522; organism=Citrus sinensis; type=EST; length=768bpback to top |