CV712522
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712522 vs. ExPASy Swiss-Prot
Match: NU4C_IPOPU (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Ipomoea purpurea GN=ndhD PE=3 SV=1) HSP 1 Score: 406.371 bits (1043), Expect = 8.975e-113 Identity = 202/255 (79.22%), Postives = 225/255 (88.24%), Query Frame = -2 Query: 3 RSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYGYKLFNAPNSYFFDS 767 +SYP ALE AVK PI+P HTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMEL PHAHS+FSP+ +IVGT+Q+IYAA TS GQRNLK+RIAYSSVSHMGFII+GIGS+TDTGLNGA+LQIISHG I AALFFLAGT+YDRIR YLDEMGG+AI +PKIFT+FS SMASLALPGMSGFVAEL+VFFGII+++K+ M KI+I+FVMAIG+ILTPIYSLSMLRQMFYGYKLFNAPNS F DS Sbjct: 203 QSYPAALEIIFYIGFFIAFAVKSPILPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELFPHAHSLFSPYLVIVGTIQMIYAALTSLGQRNLKRRIAYSSVSHMGFIIIGIGSMTDTGLNGALLQIISHGFIGAALFFLAGTTYDRIRLVYLDEMGGIAIQMPKIFTMFSSFSMASLALPGMSGFVAELLVFFGIISAKKYLFMSKILISFVMAIGIILTPIYSLSMLRQMFYGYKLFNAPNSSFLDS 457
BLAST of CV712522 vs. ExPASy Swiss-Prot
Match: NU4C_POPAL (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Populus alba GN=ndhD PE=3 SV=1) HSP 1 Score: 405.601 bits (1041), Expect = 1.531e-112 Identity = 203/255 (79.61%), Postives = 221/255 (86.67%), Query Frame = -2 Query: 3 RSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYGYKLFNAPNSYFFDS 767 +SYPV LE AVK PIIP HTWLPDTHGEAHYSTCMLLAGILLKMGAYGL+RINMELL HAHSIFS W +IVG +QIIYAASTS GQ+NLKKRIAYSSVSHMGF I+GI SI+D GLNGA+LQIISHG I AALFFL+GTSYDRIR YLDEMGG+A +PKIF +FSILS+ASLALPGMSGF AEL+VFFGIIT++KFFLMPKI+ITFV A+G ILTPIY LSMLRQMFYGYKLFNA NSYFFDS Sbjct: 203 QSYPVTLEILFYIGFLIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLSHAHSIFSSWLIIVGAIQIIYAASTSSGQKNLKKRIAYSSVSHMGFTIIGIYSISDMGLNGAILQIISHGFIGAALFFLSGTSYDRIRLVYLDEMGGMATLMPKIFMMFSILSLASLALPGMSGFFAELVVFFGIITAKKFFLMPKILITFVTAVGTILTPIYLLSMLRQMFYGYKLFNATNSYFFDS 457
BLAST of CV712522 vs. ExPASy Swiss-Prot
Match: NU4C_AGRST (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Agrostis stolonifera GN=ndhD PE=3 SV=1) HSP 1 Score: 405.216 bits (1040), Expect = 2.000e-112 Identity = 199/255 (78.04%), Postives = 221/255 (86.67%), Query Frame = -2 Query: 3 RSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYGYKLFNAPNSYFFDS 767 +SYP LE AVKLPIIP HTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAH +FSPW +I+G +QIIYAASTS GQRN KKRIAYSSVSHMGFII+GIGSIT+ GLNGA+LQI+SHG I A LFFLAGT+ DR+R YL+E+GG++IP+PKIFT+FS SMASLALPGMSGFVAEL+VFFG+ITS KF LMPK++ITFVMAIGMILTPIY LSMLRQMFYGYKLFN PN+ F DS Sbjct: 203 QSYPTTLEILLYFGFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHYLFSPWLVIIGAIQIIYAASTSLGQRNFKKRIAYSSVSHMGFIIIGIGSITNIGLNGAILQILSHGFIGATLFFLAGTASDRMRLVYLEELGGISIPMPKIFTMFSSFSMASLALPGMSGFVAELVVFFGLITSPKFLLMPKMLITFVMAIGMILTPIYLLSMLRQMFYGYKLFNVPNANFVDS 457
BLAST of CV712522 vs. ExPASy Swiss-Prot
Match: NU4C_LOLPR (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Lolium perenne GN=ndhD PE=3 SV=1) HSP 1 Score: 404.831 bits (1039), Expect = 2.611e-112 Identity = 198/255 (77.65%), Postives = 221/255 (86.67%), Query Frame = -2 Query: 3 RSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYGYKLFNAPNSYFFDS 767 +SYP LE AVKLPIIP HTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAH +FSPW +I+G +QIIYAASTS GQRN KKRIAYSS+SHMGFII+GIGSIT+ GLNGA+LQI+SHG I A LFFLAGT+ DR+R YL+E+GG++IP+PKIFT+FS SMASLALPGMSGFVAEL+VFFG+ITS KF LMPK++ITFVMAIGMILTPIY LSMLRQMFYGYKLFN PN+ F DS Sbjct: 205 QSYPATLEILLYFGFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHYLFSPWLVIIGAIQIIYAASTSLGQRNFKKRIAYSSISHMGFIIIGIGSITNIGLNGAILQILSHGFIGATLFFLAGTASDRMRLVYLEELGGISIPMPKIFTMFSSFSMASLALPGMSGFVAELVVFFGLITSPKFLLMPKMLITFVMAIGMILTPIYLLSMLRQMFYGYKLFNVPNANFVDS 459
BLAST of CV712522 vs. ExPASy Swiss-Prot
Match: NU4C_LEMMI (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Lemna minor GN=ndhD PE=2 SV=1) HSP 1 Score: 404.831 bits (1039), Expect = 2.611e-112 Identity = 202/255 (79.22%), Postives = 221/255 (86.67%), Query Frame = -2 Query: 3 RSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYGYKLFNAPNSYFFDS 767 +SYP+ LE AVKLPIIP HTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINME L HAHSIFSPW +IVGT+QIIYAA TS GQRNLKKRIAYSSVSHMGFII+GIGS+T+TGLNGA+LQ++SHG I AALFFL GTS DRIR YLDEMGG++IP+PKIFT+FS SMASLALPGMSGFVAEL+VF GIITSQK+ LM KI+IT VMAIG+ILTPIY LSMLRQMFYGYKLFN NS+F DS Sbjct: 203 QSYPLGLEILLYFGFLIAFAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMEFLSHAHSIFSPWLVIVGTIQIIYAALTSLGQRNLKKRIAYSSVSHMGFIIIGIGSLTNTGLNGAILQLLSHGFIGAALFFLGGTSCDRIRLVYLDEMGGISIPMPKIFTMFSSFSMASLALPGMSGFVAELMVFLGIITSQKYLLMTKIIITLVMAIGIILTPIYLLSMLRQMFYGYKLFNLSNSFFVDS 457
BLAST of CV712522 vs. ExPASy Swiss-Prot
Match: NU4C_WHEAT (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Triticum aestivum GN=ndhD PE=3 SV=1) HSP 1 Score: 404.445 bits (1038), Expect = 3.411e-112 Identity = 199/255 (78.04%), Postives = 220/255 (86.27%), Query Frame = -2 Query: 3 RSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYGYKLFNAPNSYFFDS 767 +SYP LE AVKLPIIP HTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAH +FSPW +I+G +QIIYAASTS GQRN KKRIAYSSVSHMGFII+GIGSIT+ GLNGA+LQI+SHG I A LFFLAGT+ DR+R YL+E+GG++IP+PKIFT+FS SMASLALPGMSGFVAEL+VFFG+ITS KF LMPK +ITFVMAIGMILTPIY LSMLRQMFYGYKLFN PN+ F DS Sbjct: 203 QSYPATLEILLYFGFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHYLFSPWLVIIGAIQIIYAASTSLGQRNFKKRIAYSSVSHMGFIIIGIGSITNIGLNGAILQILSHGFIGATLFFLAGTASDRMRLVYLEELGGISIPMPKIFTMFSSFSMASLALPGMSGFVAELVVFFGLITSPKFLLMPKTLITFVMAIGMILTPIYLLSMLRQMFYGYKLFNVPNANFVDS 457
BLAST of CV712522 vs. ExPASy Swiss-Prot
Match: NU4C_POPTR (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Populus trichocarpa GN=ndhD PE=3 SV=2) HSP 1 Score: 404.06 bits (1037), Expect = 4.454e-112 Identity = 202/255 (79.22%), Postives = 221/255 (86.67%), Query Frame = -2 Query: 3 RSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYGYKLFNAPNSYFFDS 767 +SYPV LE AVK PIIP HTWLPDTHGEAHYSTCMLLAGILLKMGAYGL+RINMELL HAHSIFS W +IVG +QIIYAASTS GQ+NLKKRIAYSSVSHMGF I+GI SI+D GLNGA+LQIISHG I AALFFL+GTSYDRIR YLDEMGG+A +PKIF +FSILS+ASLALPGMSGF AEL+VFFGIIT++K+FLMPKI+ITFV A+G ILTPIY LSMLRQMFYGYKLFNA NSYFFDS Sbjct: 203 QSYPVTLEILFYIGFLIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLSHAHSIFSSWLIIVGAIQIIYAASTSSGQKNLKKRIAYSSVSHMGFTIIGICSISDMGLNGAILQIISHGFIGAALFFLSGTSYDRIRLVYLDEMGGMATLMPKIFMMFSILSLASLALPGMSGFFAELVVFFGIITAKKYFLMPKILITFVTAVGTILTPIYLLSMLRQMFYGYKLFNARNSYFFDS 457
BLAST of CV712522 vs. ExPASy Swiss-Prot
Match: NU4C_SORBI (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Sorghum bicolor GN=ndhD PE=3 SV=1) HSP 1 Score: 402.905 bits (1034), Expect = 9.924e-112 Identity = 198/255 (77.65%), Postives = 220/255 (86.27%), Query Frame = -2 Query: 3 RSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYGYKLFNAPNSYFFDS 767 +SYP LE AVKLPIIP HTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIR+NMELLPHAH +FSPW +I+G VQIIYAASTS GQRN KKRIAYSSVSHMGFII+GIGSIT+ GLNGA+LQI+SHG I A LFFLAGT+ DR+R YL+E+GG++IP+PKIFT+FS SMASLALPGMSGFVAEL+VFFG+ITS KF LMPK++ITFVMAIGMILTPIY LSMLRQMFYGYKLF+ PN F DS Sbjct: 203 QSYPTTLEILLYFGFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRVNMELLPHAHYLFSPWLVIIGAVQIIYAASTSLGQRNFKKRIAYSSVSHMGFIIIGIGSITNIGLNGAILQILSHGFIGATLFFLAGTACDRMRLVYLEELGGISIPMPKIFTMFSSFSMASLALPGMSGFVAELVVFFGLITSPKFMLMPKMLITFVMAIGMILTPIYLLSMLRQMFYGYKLFHVPNKNFVDS 457
BLAST of CV712522 vs. ExPASy Swiss-Prot
Match: NU4C_SACOF (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Saccharum officinarum GN=ndhD PE=3 SV=2) HSP 1 Score: 402.905 bits (1034), Expect = 9.924e-112 Identity = 198/255 (77.65%), Postives = 220/255 (86.27%), Query Frame = -2 Query: 3 RSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYGYKLFNAPNSYFFDS 767 +SYP LE AVKLPIIP HTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIR+NMELLPHAH +FSPW +I+G VQIIYAASTS GQRN KKRIAYSSVSHMGFII+GIGSIT+ GLNGA+LQI+SHG I A LFFLAGT+ DR+R YL+E+GG++IP+PKIFT+FS SMASLALPGMSGFVAEL+VFFG+ITS KF LMPK++ITFVMAIGMILTPIY LSMLRQMFYGYKLF+ PN F DS Sbjct: 203 QSYPTTLEILLYFGFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRVNMELLPHAHYLFSPWLVIIGAVQIIYAASTSLGQRNFKKRIAYSSVSHMGFIIIGIGSITNIGLNGAILQILSHGFIGATLFFLAGTACDRMRLVYLEELGGISIPMPKIFTMFSSFSMASLALPGMSGFVAELVVFFGLITSPKFMLMPKMLITFVMAIGMILTPIYLLSMLRQMFYGYKLFHVPNKNFVDS 457
BLAST of CV712522 vs. ExPASy Swiss-Prot
Match: NU4C_HORVU (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Hordeum vulgare GN=ndhD PE=2 SV=2) HSP 1 Score: 402.134 bits (1032), Expect = 1.693e-111 Identity = 198/255 (77.65%), Postives = 219/255 (85.88%), Query Frame = -2 Query: 3 RSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYGYKLFNAPNSYFFDS 767 +SYP LE AVKLPIIP HTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAH +FSPW +I+G +QIIYAA TS GQRN KKRIAYSSVSHMGFII+GIGSIT+ GLNGA+LQI+SHG I A LFFLAGT+ DR+R YL+E+GG++IP+PKIFT+FS SMASLALPGMSGFVAEL+VFFG+ITS KF LMPK +ITFVMAIGMILTPIY LSMLRQMFYGYKLFN PN+ F DS Sbjct: 203 QSYPATLEILLYFGFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHYLFSPWLVIIGAIQIIYAALTSLGQRNFKKRIAYSSVSHMGFIIIGIGSITNIGLNGAILQILSHGFIGATLFFLAGTASDRMRLVYLEELGGISIPMPKIFTMFSSFSMASLALPGMSGFVAELVVFFGLITSPKFLLMPKALITFVMAIGMILTPIYLLSMLRQMFYGYKLFNVPNANFVDS 457 The following BLAST results are available for this feature:
BLAST of CV712522 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 487
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712522 ID=CV712522; Name=CV712522; organism=Citrus sinensis; type=EST; length=768bpback to top |