CV712522
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712522 vs. ExPASy Swiss-Prot
Match: NU4C_CHLAT (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Chlorokybus atmophyticus GN=ndhD PE=3 SV=2) HSP 1 Score: 317.775 bits (813), Expect = 4.198e-86 Identity = 158/249 (63.45%), Postives = 193/249 (77.51%), Query Frame = -2 Query: 21 RSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYGYKLFNAPN 767 + YP+ LE AVKLP P HTWLPDTHGEAHYSTCMLLAGILLKMG Y LIRINM++LP+AH IF+P+ +I+G + IIYAA TS QRN+K++IAYSSVSHMGF+++GIGS+T+ GL+GAVLQ+ISHGLI A+LFFLAGT+YDR R L++MGG+A +PK F +F+ S+ASLALPGMSGFVAEL+VF G TS + K +ITF+ IG+ILTPIY LSMLRQ FYG + F N Sbjct: 202 KEYPLNLEILLYIGFLIAYAVKLPAFPLHTWLPDTHGEAHYSTCMLLAGILLKMGGYALIRINMDMLPNAHLIFAPFLIIIGVINIIYAALTSFAQRNMKRKIAYSSVSHMGFVLIGIGSLTNLGLSGAVLQMISHGLIGASLFFLAGTTYDRTRTLILEDMGGVAKKMPKTFAMFTTCSLASLALPGMSGFVAELMVFLGFATSASYSFEFKAIITFLEGIGIILTPIYLLSMLRQAFYGSESFTLLN 450
BLAST of CV712522 vs. ExPASy Swiss-Prot
Match: NU4C_MESVI (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Mesostigma viride GN=ndhD PE=3 SV=1) HSP 1 Score: 309.301 bits (791), Expect = 1.493e-83 Identity = 151/241 (62.66%), Postives = 188/241 (78.01%), Query Frame = -2 Query: 45 RSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYG 767 + YP+ LE AVKLP P HTWLPDTHGEAHYSTCMLLAGILLKMG Y LIRINM +LP+AH F+P+ I+G + IIYAA TS QRN+K++IAYSS+SHMGF+++GI S TD GL+GA+LQ++SHGLI A+LFFLAGT+YDR R L++MGG+A +PKIF +F+ S+ASLALPGMSGFVAEL+VF G S + + + +ITF+ AIG+I+TPIY LSMLRQ+FYG Sbjct: 202 KEYPINLEILFYICFLIAYAVKLPAFPVHTWLPDTHGEAHYSTCMLLAGILLKMGGYALIRINMNMLPNAHIYFAPYLAIIGVINIIYAALTSFAQRNIKRKIAYSSISHMGFVLIGISSFTDIGLSGAMLQMVSHGLIGASLFFLAGTTYDRTRTLILEDMGGIAKYMPKIFAMFTTCSLASLALPGMSGFVAELMVFLGFANSNAYSIEFRGIITFLEAIGIIVTPIYLLSMLRQVFYG 442
BLAST of CV712522 vs. ExPASy Swiss-Prot
Match: NU4C_ACAM1 (NAD(P)H-quinone oxidoreductase chain 4 OS=Acaryochloris marina (strain MBIC 11017) GN=ndhD PE=3 SV=1) HSP 1 Score: 287.73 bits (735), Expect = 4.653e-77 Identity = 143/241 (59.34%), Postives = 180/241 (74.69%), Query Frame = -2 Query: 45 RSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYG 767 + YP+ + AVKLPI+P HTWLPD HGEA MLLAGILLKMG Y LIR+N+ELLP AH+ F+P +I+G V IIYAA TS QRNLK++IAYSS+SHMGF+++GI S TD G++GAVLQ++SHGLI A+LFFL G +YDR L+EMGG+A +PKIF +F+ SMASLALPGMSGFVAEL+VF G+ TS + L ++ + + IG+ILTPIY LSMLR++FYG Sbjct: 206 KDYPLTFQLLCYTGFLVAFAVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALIRMNVELLPDAHAYFAPALIILGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGIASFTDLGMSGAVLQMVSHGLIGASLFFLVGATYDRTHTLILEEMGGVAQNMPKIFAMFTTCSMASLALPGMSGFVAELMVFVGLATSDAYSLAFRVPVVILAGIGVILTPIYLLSMLREIFYG 446
BLAST of CV712522 vs. ExPASy Swiss-Prot
Match: NU4C2_ANASP (NAD(P)H-quinone oxidoreductase chain 4-2 OS=Anabaena sp. (strain PCC 7120) GN=ndhD2 PE=3 SV=1) HSP 1 Score: 286.189 bits (731), Expect = 1.354e-76 Identity = 140/221 (63.35%), Postives = 172/221 (77.83%), Query Frame = -2 Query: 45 VKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYG 707 +KLPIIP HTWLPD HGEA MLLAGILLKMG Y LIR+N +LP AH+ F+P +++G V IIYAA TS QRNLK++IAYSS+SHMGF+I+G S TD GL+GAVLQ++SHGLI A+LFFL G +YDR LDEMGG+ +PKIF +F+ SMASLALPGMSGFVAEL+VF G TS + K+++ F+MA+G+ILTPIY LSMLR++FYG Sbjct: 224 IKLPIIPLHTWLPDAHGEATAPAHMLLAGILLKMGGYALIRMNAGILPDAHAYFAPVLVVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVIIGFASFTDLGLSGAVLQMVSHGLIGASLFFLVGATYDRTHTLMLDEMGGVGKRMPKIFAMFTACSMASLALPGMSGFVAELMVFVGFATSDAYSSTFKVIVVFLMAVGVILTPIYLLSMLREIFYG 444
BLAST of CV712522 vs. ExPASy Swiss-Prot
Match: NU4C1_ANAVT (NAD(P)H-quinone oxidoreductase chain 4 1 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=ndhD1 PE=3 SV=1) HSP 1 Score: 286.189 bits (731), Expect = 1.354e-76 Identity = 140/221 (63.35%), Postives = 172/221 (77.83%), Query Frame = -2 Query: 45 VKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYG 707 +KLPIIP HTWLPD HGEA MLLAGILLKMG Y LIR+N +LP AH+ F+P +++G V IIYAA TS QRNLK++IAYSS+SHMGF+I+G S TD GL+GAVLQ++SHGLI A+LFFL G +YDR LDEMGG+ +PKIF +F+ SMASLALPGMSGFVAEL+VF G TS + K+++ F+MA+G+ILTPIY LSMLR++FYG Sbjct: 224 IKLPIIPLHTWLPDAHGEATAPAHMLLAGILLKMGGYALIRMNAGILPDAHAYFAPVLVVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVIIGFASFTDLGLSGAVLQMVSHGLIGASLFFLVGATYDRTHTLMLDEMGGVGKRMPKIFAMFTACSMASLALPGMSGFVAELMVFVGFATSDAYSSTFKVIVVFLMAVGVILTPIYLLSMLREIFYG 444
BLAST of CV712522 vs. ExPASy Swiss-Prot
Match: NU4C2_SYNJA (NAD(P)H-quinone oxidoreductase chain 4 2 OS=Synechococcus sp. (strain JA-3-3Ab) GN=ndhD2 PE=3 SV=1) HSP 1 Score: 283.108 bits (723), Expect = 1.146e-75 Identity = 135/241 (56.02%), Postives = 184/241 (76.35%), Query Frame = -2 Query: 45 RSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYG 767 ++YP++ + VKLP+ P HTWLPD HGEA MLLAGILLKMG Y L+R+N+ +LP AH F+P +++G V II+AA TS QRNLK++IAYSS+SHMGF+++GIGS+T+ G++GA+LQ+ISHGLI A+LFFL G +YDR L+EMGG+ + +PKIF++F+ S+ASLALPGMSGFVAEL+VF G+ T+ + L ++V+ F+ A+G+ILTPIY LSMLRQ+F+G Sbjct: 219 KAYPLSFQLLLYGAFLIAYGVKLPVFPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALMRMNVGMLPDAHLYFAPVLIVLGVVNIIFAALTSFAQRNLKRKIAYSSISHMGFVLIGIGSLTEIGMSGAMLQMISHGLIGASLFFLVGATYDRTHTLELEEMGGVGLKMPKIFSMFTACSLASLALPGMSGFVAELMVFIGMATTDAYSLPFRLVVVFLAAVGVILTPIYLLSMLRQIFFG 459
BLAST of CV712522 vs. ExPASy Swiss-Prot
Match: NU4C2_MICAN (NAD(P)H-quinone oxidoreductase chain 4 2 OS=Microcystis aeruginosa (strain NIES-843) GN=ndhD2 PE=3 SV=1) HSP 1 Score: 280.796 bits (717), Expect = 5.687e-75 Identity = 138/241 (57.26%), Postives = 176/241 (73.03%), Query Frame = -2 Query: 45 RSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYG 767 + YP+ALE VKL I P HTWLPD HGEA M+LAG+LLKMG YGLIR+NM LLP AH F+P I+G V IIY A S GQ+N+K+R+AYSSVSHMGF++LGI S TD G++GA+LQ++SHGLI+A LFFLAG +YDR L+EMGG+A +PK+F LF+ +MASLALPGMSGF +E+ VF G+ +S + ++V F+ ++G+ILTPIY LSMLRQ+FYG Sbjct: 205 KDYPLALELVLYAGLLIAFGVKLAIFPLHTWLPDAHGEASAPVSMILAGVLLKMGGYGLIRLNMGLLPDAHIYFAPILAILGVVNIIYGAFASFGQQNMKRRLAYSSVSHMGFVLLGIASFTDVGISGAMLQMLSHGLIAAVLFFLAGVTYDRTHTLALNEMGGIAQAMPKVFALFTAGAMASLALPGMSGFASEITVFIGVTSSDVYSQTFRVVTVFLASVGLILTPIYLLSMLRQVFYG 445
BLAST of CV712522 vs. ExPASy Swiss-Prot
Match: NU4C2_SYNJB (NAD(P)H-quinone oxidoreductase chain 4 2 OS=Synechococcus sp. GN=ndhD2 PE=3 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 3.686e-74 Identity = 134/241 (55.60%), Postives = 181/241 (75.10%), Query Frame = -2 Query: 45 RSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYG 767 ++YP+ + VKLPI P HTWLPD HGEA MLLAGILLKMG Y L+R+N +LP AH F+P +++G V II+AA TS QRNLK++IA SS+SHMGF+++GIGS+T+ G++GA+LQ+ISHGLI A+LFFL G +YDR L+EMGG+ + +PKIF++F+ S+ASLALPGMSGFVAE++VF G+ T+ + L ++V+ F+ A+G+ILTPIY LSMLRQ+F+G Sbjct: 219 KTYPLTFQLLMYGAFLIAYGVKLPIFPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALMRMNAGMLPDAHLYFAPVLIVLGVVNIIFAALTSFAQRNLKRKIACSSISHMGFVLIGIGSLTEIGMSGAMLQMISHGLIGASLFFLVGATYDRTHTLELEEMGGVGLKMPKIFSMFTACSLASLALPGMSGFVAEIMVFIGMATTDAYSLPFRLVVVFLAAVGVILTPIYLLSMLRQIFFG 459
BLAST of CV712522 vs. ExPASy Swiss-Prot
Match: NU4C1_THEEB (NAD(P)H-quinone oxidoreductase chain 4 1 OS=Thermosynechococcus elongatus (strain BP-1) GN=ndhD1 PE=3 SV=2) HSP 1 Score: 278.1 bits (710), Expect = 3.686e-74 Identity = 134/221 (60.63%), Postives = 174/221 (78.73%), Query Frame = -2 Query: 45 VKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYG 707 VKLPI+P HTWLPD HGEA MLLAGILLKMG Y LIR+N+++LP AH+ F+P +I+G V IIYAA TS QRNLK++IAYSS+SH+GF+++GI S T+ G++GAVLQ++SHGLI A+LFFL G +YDR L+EMGG+ + KIF +F+ S+ASLALPGMSGFVAEL+VF G TS + L ++++ F+ A+G+ILTPIY LSMLR++FYG Sbjct: 224 VKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALIRMNVDMLPAAHAKFAPVLVILGVVNIIYAALTSYAQRNLKRKIAYSSISHIGFVLIGIASFTNLGMSGAVLQMVSHGLIGASLFFLVGATYDRTHTLILEEMGGVGQKMKKIFAMFTACSLASLALPGMSGFVAELMVFIGFATSDAYSLPFRVIVVFLAAVGVILTPIYLLSMLREIFYG 444
BLAST of CV712522 vs. ExPASy Swiss-Prot
Match: NU4C2_TRIEI (NAD(P)H-quinone oxidoreductase chain 4 2 OS=Trichodesmium erythraeum (strain IMS101) GN=ndhD2 PE=3 SV=1) HSP 1 Score: 275.789 bits (704), Expect = 1.830e-73 Identity = 137/240 (57.08%), Postives = 172/240 (71.67%), Query Frame = -2 Query: 48 RSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFY 767 + YP+A E VKL + P HTWLPD HGEA M+LAG+LLKMG YGLIR+N+E+L AH F+P I+G V I+Y S GQ N+K+R+AYSSV+HMGF++LGI S TD G++GA+LQ+ISHGLI+A LFFLAG +YDR+ LDEMGGL +PKIF LF+I +MASLALPGMSGF +EL+VF G+ +S + V F+ A+G+ILTPIY LSMLRQMFY Sbjct: 205 KDYPLAFELLLYLGLLITFGVKLAVFPLHTWLPDAHGEASAPVSMILAGVLLKMGGYGLIRLNLEMLSDAHVYFAPVLAILGVVNIVYGGLNSFGQSNMKRRLAYSSVAHMGFVLLGIASFTDLGISGALLQMISHGLIAAVLFFLAGVTYDRLHTLALDEMGGLGQVMPKIFALFTISAMASLALPGMSGFASELMVFVGVTSSDIYSSTFCTVTVFLAAVGLILTPIYLLSMLRQMFY 444 The following BLAST results are available for this feature:
BLAST of CV712522 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 487
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712522 ID=CV712522; Name=CV712522; organism=Citrus sinensis; type=EST; length=768bpback to top |