CV712521
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712521 vs. ExPASy Swiss-Prot
Match: NU4LC_ANASP (NAD(P)H-quinone oxidoreductase subunit 4L OS=Anabaena sp. (strain PCC 7120) GN=ndhE PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.441e-13 Identity = 41/94 (43.62%), Postives = 53/94 (56.38%), Query Frame = 1 Query: 16 YLVLSAYLFSIGIYGLITSRNMVRALMCLELILNAVNINFVTFSDFFDSRQLKGDXXXXXXXXXXXXXXXXXXXXXXXXYRNRKSTRINQSTLL 297 +L+L+A LF IGIYGLITSRN VR LM +EL+LNAVN+N + FS++ DS +KG YRNR + + Q LL Sbjct: 6 FLLLAAALFCIGIYGLITSRNAVRVLMSIELLLNAVNLNLMAFSNYLDSTLIKGQVFTVFVITVAAAEAAVGLAIVLAIYRNRDTVDMEQFNLL 99
BLAST of CV712521 vs. ExPASy Swiss-Prot
Match: NU4LC_SYNY3 (NAD(P)H-quinone oxidoreductase subunit 4L OS=Synechocystis sp. (strain PCC 6803) GN=ndhE PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 7.575e-13 Identity = 40/93 (43.01%), Postives = 53/93 (56.99%), Query Frame = 1 Query: 19 LVLSAYLFSIGIYGLITSRNMVRALMCLELILNAVNINFVTFSDFFDSRQLKGDXXXXXXXXXXXXXXXXXXXXXXXXYRNRKSTRINQSTLL 297 L+L+A LF IGIYGLITSRN VR LM +EL+LNAVN+N + FS++ D ++G YRNR++T + Q LL Sbjct: 9 LILAAALFCIGIYGLITSRNAVRVLMSIELLLNAVNLNLMGFSNYLDPSNIRGQVFAIFVITIAAAEAAVGLAIVLAIYRNRETTDMEQFNLL 101
BLAST of CV712521 vs. ExPASy Swiss-Prot
Match: NU4LC_PLEBO (NAD(P)H-quinone oxidoreductase subunit 4L OS=Plectonema boryanum GN=ndhE PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.292e-12 Identity = 37/94 (39.36%), Postives = 54/94 (57.45%), Query Frame = 1 Query: 16 YLVLSAYLFSIGIYGLITSRNMVRALMCLELILNAVNINFVTFSDFFDSRQLKGDXXXXXXXXXXXXXXXXXXXXXXXXYRNRKSTRINQSTLL 297 +L+++A LF IG+YGL+TSRN VR LM +EL+LNAVN+N + FS++ D +++KG YRNR + + Q LL Sbjct: 6 FLLIAAALFCIGVYGLVTSRNAVRVLMSIELMLNAVNLNLMAFSNYLDPQEIKGQMFTIFVITIAAAEAAVGLAIVLAIYRNRDTVDMEQFNLL 99
BLAST of CV712521 vs. ExPASy Swiss-Prot
Match: NU4LC_ANTFO (NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic OS=Anthoceros formosae GN=ndhE PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.292e-12 Identity = 40/88 (45.45%), Postives = 50/88 (56.82%), Query Frame = 1 Query: 19 LVLSAYLFSIGIYGLITSRNMVRALMCLELILNAVNINFVTFSDFFDSRQLKGDXXXXXXXXXXXXXXXXXXXXXXXXYRNRKSTRIN 282 L+ A+ F IGI GLITSRNMVRA MCLE I NAVN+N V S+ D+ ++KG+ YRNRKSTR++ Sbjct: 6 LIAGAFSFCIGISGLITSRNMVRAPMCLESIFNAVNVNSVVSSNTLDAEEIKGEIFAIFVIAIAAAEAAIGLSIALAIYRNRKSTRVD 93
BLAST of CV712521 vs. ExPASy Swiss-Prot
Match: NU4LC_SYNJA (NAD(P)H-quinone oxidoreductase subunit 4L OS=Synechococcus sp. (strain JA-3-3Ab) GN=ndhE PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.759e-12 Identity = 39/94 (41.49%), Postives = 52/94 (55.32%), Query Frame = 1 Query: 16 YLVLSAYLFSIGIYGLITSRNMVRALMCLELILNAVNINFVTFSDFFDSRQLKGDXXXXXXXXXXXXXXXXXXXXXXXXYRNRKSTRINQSTLL 297 +LV++A LF IGIYGLI SRN +R LM +EL+LNAVN+NF+ FS+F DS ++G YRNR + + LL Sbjct: 7 FLVVAAILFCIGIYGLIVSRNAIRVLMSIELMLNAVNLNFMAFSNFVDSGLIRGQVFSVFVITVAAAEAAVGLAIVLGIYRNRATIDMESFNLL 100
BLAST of CV712521 vs. ExPASy Swiss-Prot
Match: NU4LC_PAUCH (NAD(P)H-quinone oxidoreductase subunit 4L, organellar chromatophore OS=Paulinella chromatophora GN=ndhE PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.866e-11 Identity = 37/94 (39.36%), Postives = 51/94 (54.26%), Query Frame = 1 Query: 16 YLVLSAYLFSIGIYGLITSRNMVRALMCLELILNAVNINFVTFSDFFDSRQLKGDXXXXXXXXXXXXXXXXXXXXXXXXYRNRKSTRINQSTLL 297 YL L+A LF IG++GLI SRN VR LM +EL+LNAVNIN + FS++ D ++G YRNR++ + + LL Sbjct: 8 YLTLAAVLFCIGVWGLINSRNAVRVLMSIELMLNAVNINLMAFSNYLDGELIRGQVFAIFVITVAAAEAAVGLAILLSLYRNRQTVDMERFNLL 101 The following BLAST results are available for this feature:
BLAST of CV712521 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 266
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712521 ID=CV712521; Name=CV712521; organism=Citrus sinensis; type=EST; length=871bpback to top |