CV712519
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712519 vs. ExPASy Swiss-Prot
Match: RL23_PONAB (60S ribosomal protein L23 OS=Pongo abelii GN=RPL23 PE=2 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 1.473e-62 Identity = 116/136 (85.29%), Postives = 127/136 (93.38%), Query Frame = -2 Query: 223 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAA 630 MSKRGRGGS+G KFR+SLGLPV A +NCADNTGAKNLYIISVKGIKG+LNRLP+A VGDMVMATVKKGKP+LRKKV PAV++RQRK +RRKDGVF+YFEDNAGVIVN KGEMKGSAITGP+ KECADLWPRIAS A Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGQLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNA 136
BLAST of CV712519 vs. ExPASy Swiss-Prot
Match: RL23_AEDAE (60S ribosomal protein L23 OS=Aedes aegypti GN=RpL23-A PE=2 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 2.513e-62 Identity = 113/136 (83.09%), Postives = 127/136 (93.38%), Query Frame = -2 Query: 223 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAA 630 MSKRGRGGSAG KFR+SLGLPV A +NCADNTGAKNLY+I+V GI+GRLNRLP+A VGDM +ATVKKGKP+LRKKVMPAV++RQRKP+RR+DGVF+YFEDNAGVIVN KGEMKGSAITGP+ KECADLWPRIAS A Sbjct: 1 MSKRGRGGSAGGKFRISLGLPVGAVINCADNTGAKNLYVIAVHGIRGRLNRLPAAGVGDMFVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNA 136
BLAST of CV712519 vs. ExPASy Swiss-Prot
Match: RL23_CANFA (60S ribosomal protein L23 OS=Canis familiaris GN=RPL23 PE=2 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 7.311e-62 Identity = 116/136 (85.29%), Postives = 125/136 (91.91%), Query Frame = -2 Query: 223 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAA 630 MSKRGRGGS+G KFR+SLGLPV A +NCADNTGAKNLYIISVKGIKGRLNRLP+A VGDMVMATVKKGKP LRKKV PAV++RQRK +RRKDGVF+YFEDNAGVIVN KGEMKGSAITGP+ KECADLWP IAS A Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPXLRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVXKECADLWPXIASNA 136
BLAST of CV712519 vs. ExPASy Swiss-Prot
Match: RL23_DROME (60S ribosomal protein L23 OS=Drosophila melanogaster GN=RpL23 PE=1 SV=2) HSP 1 Score: 236.498 bits (602), Expect = 9.549e-62 Identity = 112/137 (81.75%), Postives = 128/137 (93.43%), Query Frame = -2 Query: 220 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAAN 630 MSKRGRGG+AG KFR+SLGLPV A +NCADNTGAKNLY+I+V GI+GRLNRLP+A VGDM +ATVKKGKP+LRKKVMPAV++RQRKP+RR+DGVF+YFEDNAGVIVN KGEMKGSAITGP+ KECADLWPRIAS A+ Sbjct: 1 MSKRGRGGTAGGKFRISLGLPVGAVMNCADNTGAKNLYVIAVHGIRGRLNRLPAAGVGDMFVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNAS 137
BLAST of CV712519 vs. ExPASy Swiss-Prot
Match: RL23_SCHPO (60S ribosomal protein L23 OS=Schizosaccharomyces pombe GN=rpl23a PE=2 SV=1) HSP 1 Score: 225.713 bits (574), Expect = 1.686e-58 Identity = 105/133 (78.95%), Postives = 120/133 (90.23%), Query Frame = -2 Query: 223 RGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAA 621 RGRG ++G K+RM+LGLPV A +NCADN+GAKNLYI+SV G RLNRLP+A GDMV+ATVKKGKPDLRKK+MPA++VRQRK WRRKDGV++YFEDNAGVIVNPKGEMKGSAITGP+ KECADLWPRIAS A Sbjct: 3 RGRGAASGTKYRMTLGLPVQAIMNCADNSGAKNLYIVSVFGTGARLNRLPAASCGDMVLATVKKGKPDLRKKIMPAIVVRQRKAWRRKDGVYLYFEDNAGVIVNPKGEMKGSAITGPVAKECADLWPRIASNA 135
BLAST of CV712519 vs. ExPASy Swiss-Prot
Match: RL23_CAEEL (60S ribosomal protein L23 OS=Caenorhabditis elegans GN=rpl-23 PE=2 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 4.152e-57 Identity = 105/136 (77.21%), Postives = 122/136 (89.71%), Query Frame = -2 Query: 223 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAA 630 MSKRGRGG++G KFR+SLGLPV A +NCADNTGAKNL++ISV GI+GRLNRLPSA VGDM + +VKKGKP+LRKKV+ V++RQRK +RRKDG F+YFEDNAGVIVN KGEMKGSAITGP+ KECADLWPRIA+ A Sbjct: 1 MSKRGRGGASGAKFRISLGLPVGAVMNCADNTGAKNLFVISVYGIRGRLNRLPSAGVGDMFVCSVKKGKPELRKKVLQGVVIRQRKQFRRKDGTFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIAANA 136
BLAST of CV712519 vs. ExPASy Swiss-Prot
Match: RL23_BRUMA (60S ribosomal protein L23 OS=Brugia malayi GN=RPL23 PE=2 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 1.578e-56 Identity = 107/136 (78.68%), Postives = 122/136 (89.71%), Query Frame = -2 Query: 223 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAA 630 MSKRGRGG++G KFR+SLGLPV A +NCADNTGAKNL++I+V GIKGRLNRLPSA VGDM +A+VKKGKP+LRKKV+ AV+VRQRK +RR DG +YFEDNAGVIVN KGEMKGSAITGP+ KECADLWPRIAS A Sbjct: 1 MSKRGRGGASGAKFRISLGLPVGAVMNCADNTGAKNLFVIAVSGIKGRLNRLPSAGVGDMFVASVKKGKPELRKKVLQAVVVRQRKQYRRIDGSSIYFEDNAGVIVNNKGEMKGSAITGPVTKECADLWPRIASNA 136
BLAST of CV712519 vs. ExPASy Swiss-Prot
Match: RL23_YEAST (60S ribosomal protein L23 OS=Saccharomyces cerevisiae GN=RPL23A PE=1 SV=3) HSP 1 Score: 218.779 bits (556), Expect = 2.060e-56 Identity = 101/127 (79.53%), Postives = 116/127 (91.34%), Query Frame = -2 Query: 229 GSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIAS 609 G+ G KFR+SLGLPV A +NCADN+GA+NLYII+VKG RLNRLP+A +GDMVMATVKKGKP+LRKKVMPA++VRQ K WRR+DGVF+YFEDNAGVI NPKGEMKGSAITGP+GKECADLWPR+AS Sbjct: 5 GAQGTKFRISLGLPVGAIMNCADNSGARNLYIIAVKGSGSRLNRLPAASLGDMVMATVKKGKPELRKKVMPAIVVRQAKSWRRRDGVFLYFEDNAGVIANPKGEMKGSAITGPVGKECADLWPRVAS 131
BLAST of CV712519 vs. ExPASy Swiss-Prot
Match: RL23_DICDI (60S ribosomal protein L23 OS=Dictyostelium discoideum GN=rpl23 PE=3 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 2.440e-49 Identity = 91/128 (71.09%), Postives = 113/128 (88.28%), Query Frame = -2 Query: 223 SAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAA 606 + G+ +R+SLGLPV A +N ADN+GAKNLY+I+VKGIKGRLNRLPSA VGDMVMATVKKGKP+LRKKV ++VRQRK W+RKDGV++YFEDNAGV+ NPKGE+KG+ I GP+ KEC+DLWP++A+ A Sbjct: 6 AVGSNYRVSLGLPVGAVMNSADNSGAKNLYVIAVKGIKGRLNRLPSAGVGDMVMATVKKGKPELRKKVCTGLVVRQRKHWKRKDGVYIYFEDNAGVMCNPKGEVKGN-ILGPVAKECSDLWPKVATNA 132
BLAST of CV712519 vs. ExPASy Swiss-Prot
Match: RL23_TRYCR (60S ribosomal protein L23 OS=Trypanosoma cruzi GN=RPL23 PE=2 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 4.171e-41 Identity = 86/128 (67.19%), Postives = 103/128 (80.47%), Query Frame = -2 Query: 223 GNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKG-EMKGSAITGPIGKECA-DLWPRIASAA 600 G +FR+SL LPV A VNCADNTGAKNLYIISVKG GRLNRLP+A +GD+VMA+VKKGKP+LR+KV+ AVI+RQRK WRRKDG +YFEDNAGVIVN +G + + S I GP+ KE P+I+S A Sbjct: 10 GCRFRVSLALPVGAVVNCADNTGAKNLYIISVKGYHGRLNRLPAAALGDIVMASVKKGKPELRRKVLNAVIIRQRKSWRRKDGTVIYFEDNAGVIVNSQGRDGRVSGIAGPVAKEAGRPSGPKISSHA 137 The following BLAST results are available for this feature:
BLAST of CV712519 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 398
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712519 ID=CV712519; Name=CV712519; organism=Citrus sinensis; type=EST; length=667bpback to top |