CV712519
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712519 vs. ExPASy Swiss-Prot
Match: RL14_KOCRD (50S ribosomal protein L14 OS=Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) GN=rplN PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.679e-13 Identity = 44/102 (43.14%), Postives = 62/102 (60.78%), Query Frame = -2 Query: 250 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD 546 ADNTGAK + I V G GR A +GD+++ATVK P K V+ AV+VR +K RR DG ++ F++NA VI+ G+ +G+ I GP+G+E D Sbjct: 11 ADNTGAKEILTIRVLGGSGRRY----AGIGDVIVATVKDAIPGGNVKKGDVVKAVVVRTKKQRRRPDGSYIRFDENAAVILKNDGDPRGTRIFGPVGRELRD 108
BLAST of CV712519 vs. ExPASy Swiss-Prot
Match: RK14_SACOF (50S ribosomal protein L14, chloroplastic OS=Saccharum officinarum GN=rpl14 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.679e-13 Identity = 43/115 (37.39%), Postives = 69/115 (60.00%), Query Frame = -2 Query: 223 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADL-WPRIASAA 555 +N ADN+GA+ L I V G G A +GD+++A +K P + R +V+ AVIVR RK ++ DG+ + ++DNA VI++ KG KG+ + G + +E +L + +I S A Sbjct: 8 LNVADNSGARKLMCIRVIGAAGNQRY---ARIGDVIIAVIKDAVPQMPLERSEVIRAVIVRTRKEFKGDDGIIIRYDDNAAVIIDQKGNPKGTRVFGAVAEELRELNYTKIVSLA 119
BLAST of CV712519 vs. ExPASy Swiss-Prot
Match: RK14_SACHY (50S ribosomal protein L14, chloroplastic OS=Saccharum hybrid GN=rpl14 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.679e-13 Identity = 43/115 (37.39%), Postives = 69/115 (60.00%), Query Frame = -2 Query: 223 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADL-WPRIASAA 555 +N ADN+GA+ L I V G G A +GD+++A +K P + R +V+ AVIVR RK ++ DG+ + ++DNA VI++ KG KG+ + G + +E +L + +I S A Sbjct: 8 LNVADNSGARKLMCIRVIGAAGNQRY---ARIGDVIIAVIKDAVPQMPLERSEVIRAVIVRTRKEFKGDDGIIIRYDDNAAVIIDQKGNPKGTRVFGAVAEELRELNYTKIVSLA 119
BLAST of CV712519 vs. ExPASy Swiss-Prot
Match: RL14_SYNFM (50S ribosomal protein L14 OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=rplN PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.806e-13 Identity = 43/102 (42.16%), Postives = 64/102 (62.75%), Query Frame = -2 Query: 259 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 555 +N ADN+GAK LY I V G G R S VGD+++ +VK+ P+ + K V+ AV+VR +K RR DG ++ F+DN+ V++N E G+ I GP+ +E Sbjct: 8 LNAADNSGAKRLYCIKVLG--GTRKRYAS--VGDIIVVSVKEAIPNAKVKKGDVLKAVVVRTQKEVRRPDGSYIKFDDNSAVLINQAKEPIGTRIFGPVARE 105
BLAST of CV712519 vs. ExPASy Swiss-Prot
Match: RL14_SALTO (50S ribosomal protein L14 OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=rplN PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.806e-13 Identity = 43/102 (42.16%), Postives = 61/102 (59.80%), Query Frame = -2 Query: 250 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD 546 ADNTGA+ + I V G GR A +GD+++ATVK P K V+ AV+VR K RR DG ++ F++NA VI+ G+ +G+ I GP+G+E D Sbjct: 11 ADNTGAREILCIRVLGGSGRRY----ASIGDVIVATVKDAIPGAGVKKGDVVKAVVVRTAKEKRRPDGSYIRFDENAAVIIKDGGDPRGTRIFGPVGRELRD 108
BLAST of CV712519 vs. ExPASy Swiss-Prot
Match: RL14_SALAI (50S ribosomal protein L14 OS=Salinispora arenicola (strain CNS-205) GN=rplN PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.806e-13 Identity = 43/102 (42.16%), Postives = 61/102 (59.80%), Query Frame = -2 Query: 250 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD 546 ADNTGA+ + I V G GR A +GD+++ATVK P K V+ AV+VR K RR DG ++ F++NA VI+ G+ +G+ I GP+G+E D Sbjct: 11 ADNTGAREILCIRVLGGSGRRY----ASIGDVIVATVKDAIPGAGVKKGDVVKAVVVRTAKEKRRPDGSYIRFDENAAVIIKDGGDPRGTRIFGPVGRELRD 108
BLAST of CV712519 vs. ExPASy Swiss-Prot
Match: RL14_HERA2 (50S ribosomal protein L14 OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) GN=rplN PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.806e-13 Identity = 46/99 (46.46%), Postives = 60/99 (60.61%), Query Frame = -2 Query: 259 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 546 ADNTGAK L I V G G R S VGD ++ATVK+ P K V+ AVIVR +K + R DG + F+DNA VI+N +G +G+ I GP+ +E Sbjct: 11 ADNTGAKELLCIRVLG--GTKRRYAS--VGDTIIATVKQANPGGSAKKGEVVRAVIVRVKKGYTRPDGSMIQFDDNAAVIINQQGNPRGTRIFGPVARE 105
BLAST of CV712519 vs. ExPASy Swiss-Prot
Match: RL14_CHLPB (50S ribosomal protein L14 OS=Chlorobium phaeobacteroides (strain BS1) GN=rplN PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.806e-13 Identity = 44/102 (43.14%), Postives = 62/102 (60.78%), Query Frame = -2 Query: 250 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD 546 ADN+GAK + I V G GR A +GD +M TVK P +K+V AV+VR K RRKDG ++ F++NA V++N +GE +G+ I GP+ +E D Sbjct: 11 ADNSGAKKVRCIHVFGGTGRRY----ASLGDQIMVTVKAAVPGGVVKKKEVTKAVVVRCAKEKRRKDGSYIRFDENAVVLLNAQGEPRGTRIFGPVARELRD 108
BLAST of CV712519 vs. ExPASy Swiss-Prot
Match: RK14_SCEOB (50S ribosomal protein L14, chloroplastic OS=Scenedesmus obliquus GN=rpl14 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.806e-13 Identity = 43/105 (40.95%), Postives = 66/105 (62.86%), Query Frame = -2 Query: 250 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD 555 +N ADN+GA+ L I V G GR +A +GD+++A VK P++ K V+ AVIVR K RR++G+ + F+DNA V++N +G +G+ + GPI +E D Sbjct: 8 LNVADNSGARKLMCIRVLG-GGR----QTATIGDVIIAVVKDALPNMPLKKSDVVRAVIVRTSKGVRRENGMMLCFDDNAAVVINKEGNPRGTRVFGPIARELRD 107
BLAST of CV712519 vs. ExPASy Swiss-Prot
Match: RK14_PORPU (50S ribosomal protein L14, chloroplastic OS=Porphyra purpurea GN=rpl14 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.806e-13 Identity = 42/106 (39.62%), Postives = 62/106 (58.49%), Query Frame = -2 Query: 250 VNCADNTGAKNLYIISVKGIKGRLNRLPS-ACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD 555 +N ADN+GA+ + I V G PS A +GD+++ VK P++ R V+ AV+VR RK RR DG+ + F+DNA VI+N +G+ + GPI +E D Sbjct: 8 LNVADNSGARKIMCIRVLGTSN-----PSYASIGDVIIGVVKDASPNMPVKRSDVVRAVVVRTRKALRRNDGMSIRFDDNAAVIINQDNNPRGTRVFGPIARELRD 108 The following BLAST results are available for this feature:
BLAST of CV712519 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 398
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712519 ID=CV712519; Name=CV712519; organism=Citrus sinensis; type=EST; length=667bpback to top |