CV712519
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712519 vs. ExPASy Swiss-Prot
Match: RL14_SULAC (50S ribosomal protein L14P OS=Sulfolobus acidocaldarius GN=rpl14p PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.100e-28 Identity = 60/113 (53.10%), Postives = 81/113 (71.68%), Query Frame = -2 Query: 223 ATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAA 561 ++V ADN+GAK II + G +G L R+P A + D+VM +V+KG PD+RK+ AVIVRQR P+RR DG ++ FEDNA VI+NP G KG+ + GPI +E A+ WP+IAS A Sbjct: 22 SSVVVADNSGAKEAVIIGIYGYRGVLRRVPFANIADLVMVSVRKGSPDVRKQKFKAVIVRQRMPFRRPDGTWISFEDNAVVIINPDGTPKGTEVRGPIAREAAERWPKIASVA 134
BLAST of CV712519 vs. ExPASy Swiss-Prot
Match: RL14_METTP (50S ribosomal protein L14P OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=rpl14p PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.100e-28 Identity = 60/126 (47.62%), Postives = 88/126 (69.84%), Query Frame = -2 Query: 223 GNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAA 600 GNK ++ + + CADNTGA+ L+++SVK +G NR P A +GDMV+ +VKKG P++RK++ AVI+RQ+K +RR DG+ + FEDNA VI + G KGS I GP+ +E A+ + +IAS+A Sbjct: 3 GNKAKIPRSINTGTYLECADNTGARTLFVVSVKKYRGVKNRQPCAGIGDMVVVSVKKGTPEMRKQIFNAVIIRQKKEFRRPDGLRVKFEDNAAVITDDAGVPKGSEIKGPVAREVAERFGKIASSA 128
BLAST of CV712519 vs. ExPASy Swiss-Prot
Match: RL14_THEPD (50S ribosomal protein L14P OS=Thermofilum pendens (strain Hrk 5) GN=rpl14p PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.049e-28 Identity = 62/139 (44.60%), Postives = 96/139 (69.06%), Query Frame = -2 Query: 220 MSKRGRGGSAGNKFRMSL--GLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAAN 630 M+KRG + G +R+ L G+ + + V ADN+GA +I V K R+P A VGD+V+ +++ GKP+LRK+VM A+++RQR+P+RR DG ++ FEDNA VI+ P+GE KG+ I GP+ KE A+ WP++++ A+ Sbjct: 1 MAKRGPK-TVGVSYRLGLTPGVFMESLVKVADNSGATLAKVIGVPHYKAVWRRIPGAAVGDIVIVSIRAGKPELRKQVMRAIVIRQRRPYRRPDGSWIAFEDNAVVIITPEGEPKGTEIRGPLAKEAAERWPKLSAMAS 138
BLAST of CV712519 vs. ExPASy Swiss-Prot
Match: RL14_CALMQ (50S ribosomal protein L14P OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=rpl14p PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.178e-27 Identity = 63/140 (45.00%), Postives = 96/140 (68.57%), Query Frame = -2 Query: 223 MSKRGRGGSAGNKFRMSL--GLPVAATVNCADNTGAKNLYIISVKG--IKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAA 630 M+KRG + G +R L G+ + + VN ADN+GAK + +I V G K R+P VGDMV+ +V++GKP++RK+++ A++VRQR+P+RR DG ++ FEDNA VIV +G++KG+ + GP+ E A WP++AS A Sbjct: 1 MAKRGGPRTVGVPWRFHLTPGIFMNSLVNVADNSGAKVVKVIGVVGHYSKNVHRRIPGVSVGDMVVVSVQEGKPEMRKQILRAIVVRQRRPFRRPDGTWVAFEDNAVVIVTEEGQVKGTEVHGPVAMEAAQRWPQVASIA 140
BLAST of CV712519 vs. ExPASy Swiss-Prot
Match: RL14_NITMS (50S ribosomal protein L14P OS=Nitrosopumilus maritimus (strain SCM1) GN=rpl14p PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.539e-27 Identity = 60/118 (50.85%), Postives = 83/118 (70.34%), Query Frame = -2 Query: 220 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAAN 573 +PV A + CADN+GAK L +I+V + R +RLPSA VGD VKKG +LRK+V AVI+RQ+ P RR +GV + FEDNA V++ P+GE KG+ I GP+ E ++ WPR+A+ A+ Sbjct: 20 IPVGANIVCADNSGAKILEVINVPRHRTRASRLPSASVGDFCNVVVKKGPAELRKQVYGAVIIRQKYPVRRLNGVRVCFEDNAAVLITPEGETKGTDIKGPVAAEASEKWPRVANLAS 137
BLAST of CV712519 vs. ExPASy Swiss-Prot
Match: RL14_METBU (50S ribosomal protein L14P OS=Methanococcoides burtonii (strain DSM 6242) GN=rpl14p PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.625e-27 Identity = 59/127 (46.46%), Postives = 88/127 (69.29%), Query Frame = -2 Query: 220 GNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAAN 600 G + ++ L A + C DNTGA+ + IISVK +G NR+P +GDM + +VKKG P++RK+++ AVIVRQ+K +RR DG+ + FEDNA VIV+ KG KG+ I GP+ +E A+ +P+I + A+ Sbjct: 3 GIRSKIPRALNAGAKIECVDNTGARTVEIISVKKYRGVKNRMPKGGIGDMCVVSVKKGTPEMRKQILYAVIVRQKKEFRRPDGIRVAFEDNAVVIVDDKGIPKGTDIKGPVAREAAERFPKIGTTAS 129
BLAST of CV712519 vs. ExPASy Swiss-Prot
Match: RL14_HALSA (50S ribosomal protein L14P OS=Halobacterium salinarium GN=rpl14p PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 5.847e-27 Identity = 61/124 (49.19%), Postives = 84/124 (67.74%), Query Frame = -2 Query: 223 KFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAA 594 K ++ GL + + CADNTGA+ L I SV G +GR NR P A +GD + +V KG P++R++V+ AV+VRQRKP RR DG + FEDNA VI++ GE +G+ I GPI +E A+ + IAS A Sbjct: 5 KADITQGLEKGSLITCADNTGARELKITSVMGYQGRKNRHPKAGLGDTITVSVTKGTPEMRRQVLEAVVVRQRKPIRRPDGTRVKFEDNAAVIIDDLGEPRGTEIKGPISREVAERYGTIASTA 128
BLAST of CV712519 vs. ExPASy Swiss-Prot
Match: RL14_HALS3 (50S ribosomal protein L14P OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=rpl14p PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 5.847e-27 Identity = 61/124 (49.19%), Postives = 84/124 (67.74%), Query Frame = -2 Query: 223 KFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAA 594 K ++ GL + + CADNTGA+ L I SV G +GR NR P A +GD + +V KG P++R++V+ AV+VRQRKP RR DG + FEDNA VI++ GE +G+ I GPI +E A+ + IAS A Sbjct: 5 KADITQGLEKGSLITCADNTGARELKITSVMGYQGRKNRHPKAGLGDTITVSVTKGTPEMRRQVLEAVVVRQRKPIRRPDGTRVKFEDNAAVIIDDLGEPRGTEIKGPISREVAERYGTIASTA 128
BLAST of CV712519 vs. ExPASy Swiss-Prot
Match: RL14_PYRCJ (50S ribosomal protein L14P OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=rpl14p PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 7.637e-27 Identity = 65/141 (46.10%), Postives = 94/141 (66.67%), Query Frame = -2 Query: 220 MSKRGRGGSAG--NKFRMSLGLPVAATVNCADNTGAKNLYIISVKG--IKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAAN 630 M+KRG + G +F ++ G+ + + V ADN+GAK + +I V G K R+P A VGDMV+ V++GKP+LRK++ A++VRQR+P+RR DG ++ FEDNA VIV P+G+ KGS I GP+ E WP IA+ A+ Sbjct: 1 MAKRGGKRTVGVPYRFHVTPGIFMNSLVPVADNSGAKLVRVIGVVGHYSKSVHRRIPGAGVGDMVVVVVREGKPELRKQIFRAIVVRQRRPYRRPDGTWVAFEDNAVVIVTPEGDPKGSEIHGPVAMEATLRWPTIANLAS 141
BLAST of CV712519 vs. ExPASy Swiss-Prot
Match: RL14_PYRAE (50S ribosomal protein L14P OS=Pyrobaculum aerophilum GN=rpl14p PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 9.974e-27 Identity = 64/141 (45.39%), Postives = 94/141 (66.67%), Query Frame = -2 Query: 220 MSKRGRGGSAG--NKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRL--NRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAAN 630 M+KRG + G +F ++ G+ + + V ADN+GAK + +I V G + R+P A VGDMV+ V++GKP+LRK++ A++VRQR+P+RR DG ++ FEDNA VIV P+G+ KGS I GP+ E WP IA+ A+ Sbjct: 1 MAKRGGKRTVGVPYRFHVTPGIFMNSLVPVADNSGAKLVRVIGVVGHYSKTVHRRIPGAGVGDMVVVVVREGKPELRKQIFRAIVVRQRRPYRRPDGTWVAFEDNAVVIVTPEGDPKGSEIHGPVAMEATLRWPTIANLAS 141 The following BLAST results are available for this feature:
BLAST of CV712519 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 398
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712519 ID=CV712519; Name=CV712519; organism=Citrus sinensis; type=EST; length=667bpback to top |