CV712519
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712519 vs. ExPASy Swiss-Prot
Match: RL14_LEIXX (50S ribosomal protein L14 OS=Leifsonia xyli subsp. xyli GN=rplN PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.265e-13 Identity = 47/102 (46.08%), Postives = 62/102 (60.78%), Query Frame = -2 Query: 250 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD 546 ADNTGAK L I V G GR A +GD+++ATVK P K V+ AVIVR RK RR DG ++ F++NA VI+ G+ +G+ I GP+G+E D Sbjct: 11 ADNTGAKELLTIRVLGGSGRRY----AGLGDVIVATVKDAIPGGNVKKGDVVKAVIVRTRKNTRRTDGSYIKFDENAAVILKNDGDPRGTRIFGPVGRELRD 108
BLAST of CV712519 vs. ExPASy Swiss-Prot
Match: RL14_ACAM1 (50S ribosomal protein L14 OS=Acaryochloris marina (strain MBIC 11017) GN=rplN PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.265e-13 Identity = 45/106 (42.45%), Postives = 64/106 (60.38%), Query Frame = -2 Query: 250 TVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD 558 T+N ADN+GAK L I V G R VGD+++ATVK P++ K V+ AVIVR RK R+ G+ + F+DNA V++NP G +G+ + GP+ +E D Sbjct: 7 TLNVADNSGAKRLLCIRVIGGGNRRY----GGVGDVIIATVKDATPNMPVKKSDVVRAVIVRTRKSICRESGMSIRFDDNAAVLINPDGNPRGTRVFGPVARELRD 108
BLAST of CV712519 vs. ExPASy Swiss-Prot
Match: RL14_GRAFK (50S ribosomal protein L14 OS=Gramella forsetii (strain KT0803) GN=rplN PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.652e-13 Identity = 45/102 (44.12%), Postives = 63/102 (61.76%), Query Frame = -2 Query: 250 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD 546 ADNTGAK + I V G G R S VGD ++ +VK+ P+ K V AV+VR RK RR DG ++ F+DNA V++ P+GEM+G+ + GP+ +E D Sbjct: 11 ADNTGAKEVLAIRVLG--GTKKRYAS--VGDKIVVSVKEATPNGSIKKGAVSTAVVVRTRKEVRRPDGSYIRFDDNACVLLGPQGEMRGTRVFGPVARELRD 108
BLAST of CV712519 vs. ExPASy Swiss-Prot
Match: RL14_DESVM (50S ribosomal protein L14 OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=rplN PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.652e-13 Identity = 47/108 (43.52%), Postives = 66/108 (61.11%), Query Frame = -2 Query: 259 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 573 + V +T+ ADN+GAK + I V G G R A VGD+V+ +VK+ P + K VM AVIVR RK RR DG ++ F+ NA V++N +GE G+ I GP+ +E Sbjct: 2 IQVESTLQVADNSGAKKVACIKVLG--GSKRRY--ATVGDIVVVSVKEALPHCKVKKGDVMQAVIVRTRKEVRRVDGSYIKFDSNAAVLLNKQGEPVGTRIFGPVARE 105
BLAST of CV712519 vs. ExPASy Swiss-Prot
Match: RK14_STAPU (50S ribosomal protein L14, chloroplastic OS=Staurastrum punctulatum GN=rpl14 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.652e-13 Identity = 44/115 (38.26%), Postives = 70/115 (60.87%), Query Frame = -2 Query: 223 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADL-WPRIASAA 555 +N ADN+GA+ L I V G R A +GDM++A VK+ P++ + +V+ AVIVR K +R +G+ + F+DNA V+VN +G +G+ + GP+ +E D + +I S A Sbjct: 8 LNVADNSGARRLMCIRVLGSSNR----KYANIGDMIIAVVKEAVPNMPLKKSEVVRAVIVRTCKGIKRNNGMILRFDDNAAVVVNQEGNPRGTRVFGPVARELRDFNFTKIVSLA 118
BLAST of CV712519 vs. ExPASy Swiss-Prot
Match: RK14_CHLRE (50S ribosomal protein L14, chloroplastic OS=Chlamydomonas reinhardtii GN=rpl14 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.652e-13 Identity = 43/105 (40.95%), Postives = 65/105 (61.90%), Query Frame = -2 Query: 250 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD 555 +N ADN+GA+ L I G R SA +GD+++A VK P++ R ++ AVIVR RK RR++G+ + F+DNA VI+N +G +G+ + GPI +E D Sbjct: 8 LNVADNSGARELMCIRALGGSYR----ESANIGDVIIAVVKDALPNMPVKRSDIVRAVIVRTRKGIRRENGMAIRFDDNAAVIINKEGNPRGTRVFGPIARELRD 108
BLAST of CV712519 vs. ExPASy Swiss-Prot
Match: RK14_PHYPA (50S ribosomal protein L14, chloroplastic OS=Physcomitrella patens GN=rpl14 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.157e-13 Identity = 39/102 (38.24%), Postives = 64/102 (62.75%), Query Frame = -2 Query: 259 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 555 +N ADN+GA+ L I + G R A +GD+++A VK+ P++ + +V+ AV+VR K +RK+G + F+DNA VI+N +G KG+ + GP+ +E Sbjct: 8 LNVADNSGARKLMCIQILGASNR----KYAHIGDIIIAVVKEAIPNMPLKKSEVVRAVVVRTCKELKRKNGTIIQFDDNAAVIINQEGNPKGTRVFGPVARE 105
BLAST of CV712519 vs. ExPASy Swiss-Prot
Match: RK14_ADICA (50S ribosomal protein L14, chloroplastic OS=Adiantum capillus-veneris GN=rpl14 PE=2 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 2.157e-13 Identity = 42/121 (34.71%), Postives = 75/121 (61.98%), Query Frame = -2 Query: 223 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADL-WPRIASAA 573 + + + ++ ADN+GA+ L I V G R A +GD+++A VK+ P++ R +V+ AV+VR R+ +R++G+ + F+DNA VI+N +G +G+ I GP+ +E + + R+ S A Sbjct: 2 IQIQSYLDVADNSGARKLMCIRVLGTGNR----KYADIGDIIIAVVKEAVPNMFLKRSEVVRAVVVRTRRGLKRRNGMVLEFDDNAAVIINQEGNPRGTRIFGPVARELRECNFARVVSLA 118
BLAST of CV712519 vs. ExPASy Swiss-Prot
Match: RL14_THEFY (50S ribosomal protein L14 OS=Thermobifida fusca (strain YX) GN=rplN PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.817e-13 Identity = 43/102 (42.16%), Postives = 60/102 (58.82%), Query Frame = -2 Query: 250 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD 546 ADNTGAK L I V G GR A +GD ++ATVK P K ++ AV+VR K RR DG ++ F++NA V++ G+ +G+ I GP+G+E D Sbjct: 11 ADNTGAKELLTIRVLGGSGRRY----ASIGDTIVATVKDALPGAGVKKGDIVKAVVVRTTKERRRPDGFYIRFDENAAVLIKDGGDPRGTRIFGPVGRELRD 108
BLAST of CV712519 vs. ExPASy Swiss-Prot
Match: RL14_RENSM (50S ribosomal protein L14 OS=Renibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / IFO 15589) GN=rplN PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.817e-13 Identity = 45/102 (44.12%), Postives = 62/102 (60.78%), Query Frame = -2 Query: 250 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD 546 ADNTGAK + I V G GR A +GD+++ATVK P K V+ AVIVR +K RR DG ++ F++NA VI+ G+ +G+ I GP+G+E D Sbjct: 11 ADNTGAKEILAIRVLGGSGRRY----AGIGDVIVATVKDAIPGGNVKKGDVVKAVIVRTKKERRRADGSYIKFDENAAVILKNDGDPRGTRIFGPVGRELRD 108 The following BLAST results are available for this feature:
BLAST of CV712519 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 398
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712519 ID=CV712519; Name=CV712519; organism=Citrus sinensis; type=EST; length=667bpback to top |