CV712502

Overview
NameCV712502
Unique NameCV712502
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length859
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712502 vs. ExPASy Swiss-Prot
Match: 1433B_SHEEP (14-3-3 protein beta/alpha (Fragments) OS=Ovis aries GN=YWHAB PE=1 SV=2)

HSP 1 Score: 149.058 bits (375), Expect = 3.088e-35
Identity = 76/120 (63.33%), Postives = 89/120 (74.17%), Query Frame = -1
Query:  362 YKMKGDYYRYLAEFKTGDERKDVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGD 721
            YKMKGDY+RYL+E  +GD ++     S +AYQ A   ++ E+ PTHPIRLGLALNFSVFYYEI+NSP            EAI+ELDTL+EESYKDSTLIMQLLRDNLTLWTS+   D GD
Sbjct:   84 YKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSP------------EAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEGD 191          
BLAST of CV712502 vs. ExPASy Swiss-Prot
Match: 14338_ORYSJ (Putative 14-3-3-like protein GF14-H OS=Oryza sativa subsp. japonica GN=GF14H PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 6.438e-33
Identity = 77/167 (46.11%), Postives = 104/167 (62.28%), Query Frame = -1
Query:  341 IKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDYYRYLAEFKTGDERKDVADLSMKAYQAASTTAEAELSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDEAQKMDI 841
            I  Y++KVE EL  +  +++ +I  H +P    GE+ VF+YKMKGDYYRYLAEF TG E+K   D S+ AYQA                   A  FS+   EIMNSPERA  +AKQA DEA +E+++   E YKDS L+MQLL++NL LWTS++   GG+ ++  D+
Sbjct:   80 INGYKKKVEDELRAVCNEVLSIIAIHCLPLANSGENVVFFYKMKGDYYRYLAEFSTGTEKKAATDQSLMAYQA----------------WPCAQLFSLL--EIMNSPERASQVAKQALDEATAEINSAGVEGYKDSMLMMQLLKENLALWTSEL--TGGETSKDDDV 226          
BLAST of CV712502 vs. ExPASy Swiss-Prot
Match: 1433X_MAIZE (14-3-3-like protein (Fragment) OS=Zea mays PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.998e-22
Identity = 51/59 (86.44%), Postives = 55/59 (93.22%), Query Frame = -1
Query:  359 IMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGDE 535
            I+NSP+RAC+LAKQAFDEAISELD+L EESYKDSTLIMQLL DNLTLWTSD  EDGGDE
Sbjct:    1 ILNSPDRACNLAKQAFDEAISELDSLGEESYKDSTLIMQLLXDNLTLWTSDTNEDGGDE 59          
The following BLAST results are available for this feature:
BLAST of CV712502 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
1433B_SHEEP3.088e-3563.3314-3-3 protein beta/alpha (Fragments) OS=Ovis arie... [more]
14338_ORYSJ6.438e-3346.11Putative 14-3-3-like protein GF14-H OS=Oryza sativ... [more]
1433X_MAIZE2.998e-2286.4414-3-3-like protein (Fragment) OS=Zea mays PE=3 SV... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001H17_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001H17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712502 ID=CV712502; Name=CV712502; organism=Citrus sinensis; type=EST; length=859bp
CCCCTTTTTTTTAAGTCCAATTGATCAGCAGCAGCAGATATAAAAGATTC
TCGGGATGCAAATGATACAAGCAGTCCAATCATGAAACTCTTGACAGTGA
AGATAACACCCACATTATAGGAACAGCACAATAACAGTACTTGAGTGTCT
CTTGTAAACTAAGAAAAACACCGGGAGTCATAAAGGTATTGCAGCTTCCT
TGCTATCATATGCTAGAGCTCCCAAGCTCCTGGCTGGTTCACTGAGGACA
GAAAACAACAAAGATTGCAACTCTGCTCCAAAATAGGAAAACAAACCCAC
CTCTGCTTCTTCAATCTTCACCTTCACCCTCTTTAGCAGAGATGTCCATT
TTCTGGGCTTCATCACCTCCATCCTCTGGTATGTCAGAAGTCCAAAGAGT
GAGGTTGTCCCTCAATAGCTGCATTATCAACGTGCTGTCTTTGTAAGATT
CCTCACTTAATGTATCCAATTCTGAGATGGCTTCATCAAAGGCCTGCTTT
GCAAGGTGGCATGCCCTTTCAGGAGAGTTCATAATCTCATAGTAAAAAAC
TGAGAAGTTCAAGGCCAAACCAAGTCGGATGGGGTGGGTAGGAGACAATT
CAGCTTCTGCGGTAGTAGAAGCTGCCTGATAGGCTTTCATTGACAGATCA
GCAACATCTTTCCTCTCATCACCAGTCTTAAACTCTGCCAAGTACCGATA
ATAATCACCTTTCATTTTATAGTAAAACACAGTGGATTCACCTCCGGTGC
AGGAAGGGATCAAATGCTCATCAATGACTTGCATAATATCAGTGCTGATC
TTCGACAGCTCAGCTTCCACCTTTTGCCTATACTCTTTAATTCTTTTCAC
ATTAAGTTC
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