CX043566

Overview
NameCX043566
Unique NameCX043566
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length694
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX043566 vs. ExPASy Swiss-Prot
Match: PLCD_PONAB (1-acyl-sn-glycerol-3-phosphate acyltransferase delta OS=Pongo abelii GN=AGPAT4 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.958e-14
Identity = 52/170 (30.59%), Postives = 77/170 (45.29%), Query Frame = 3 
Query:  261 LALWPF---LFEKIN-RTNMVFSGDIVPV----------------------EERVLLMANHRTEVDWMYVWDLALRKGCLGYIKYILKSSLMKLPVFGWGFHILEFISVERNWEIDEHVMRQMLSTFRNPNDPLWLTIFPEGTDFTEEKRNRSQKFAADVGLPVLTNVLL 692
            L LWP    LF KIN R +   S  +V +                      +E  +++ NH+ E+D++  W L+ R G LG  K + K  L  +P+ GW ++  E +   R WE D   +   L   R+  +  +  I  EGT FTE+K   S + A   GLP L + LL
Sbjct:   36 LLLWPINKQLFRKINCRLSYCISSQLVMLLEWWSGTECTIFTDPRAYLKYGKENAIVVLNHKFEIDFLCGWSLSERFGLLGGSKVLAKKELAYVPIIGWMWYFTEMVFCSRKWEQDRKTVATSLQHLRDYPEKYFFLIHCEGTRFTEKKHEISMQVARAKGLPRLKHHLL 205
[Close]
BLAST of CX043566 vs. ExPASy Swiss-Prot
Match: PLCD_HUMAN (1-acyl-sn-glycerol-3-phosphate acyltransferase delta OS=Homo sapiens GN=AGPAT4 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.958e-14
Identity = 52/170 (30.59%), Postives = 77/170 (45.29%), Query Frame = 3 
Query:  261 LALWPF---LFEKIN-RTNMVFSGDIVPV----------------------EERVLLMANHRTEVDWMYVWDLALRKGCLGYIKYILKSSLMKLPVFGWGFHILEFISVERNWEIDEHVMRQMLSTFRNPNDPLWLTIFPEGTDFTEEKRNRSQKFAADVGLPVLTNVLL 692
            L LWP    LF KIN R +   S  +V +                      +E  +++ NH+ E+D++  W L+ R G LG  K + K  L  +P+ GW ++  E +   R WE D   +   L   R+  +  +  I  EGT FTE+K   S + A   GLP L + LL
Sbjct:   36 LLLWPINKQLFRKINCRLSYCISSQLVMLLEWWSGTECTIFTDPRAYLKYGKENAIVVLNHKFEIDFLCGWSLSERFGLLGGSKVLAKKELAYVPIIGWMWYFTEMVFCSRKWEQDRKTVATSLQHLRDYPEKYFFLIHCEGTRFTEKKHEISMQVARAKGLPRLKHHLL 205
[Close]
BLAST of CX043566 vs. ExPASy Swiss-Prot
Match: PLCD_MACFA (1-acyl-sn-glycerol-3-phosphate acyltransferase delta OS=Macaca fascicularis GN=AGPAT4 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.024e-13
Identity = 50/165 (30.30%), Postives = 74/165 (44.85%), Query Frame = 3 
Query:  261 LALWPF---LFEKIN-RTNMVFSGDIVPV----------------------EERVLLMANHRTEVDWMYVWDLALRKGCLGYIKYILKSSLMKLPVFGWGFHILEFISVERNWEIDEHVMRQMLSTFRNPNDPLWLTIFPEGTDFTEEKRNRSQKFAADVGLPVL 677
            L LWP    LF KIN R +   S  +V +                      +E  +++ NH+ E+D++  W L+ R G LG  K + K  L  +P+ GW ++  E +   R WE D   +   L   R+  +  +  I  EGT FTE+K   S + A   GLP L
Sbjct:   36 LLLWPINKQLFRKINCRLSYCISSQLVMLLEWWSGTECTIFTDPRAYPKYGKENAIVVLNHKFEIDFLCGWSLSERFGLLGGSKVLAKKELAYVPIIGWMWYFTEMVFCSRKWEQDRKTVATSLQHLRDYPEKYFFLIHCEGTRFTEKKHEISMQVARAKGLPRL 200
The following BLAST results are available for this feature:
BLAST of CX043566 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
PLCD_PONAB7.958e-1430.591-acyl-sn-glycerol-3-phosphate acyltransferase del... [more]
PLCD_HUMAN7.958e-1430.591-acyl-sn-glycerol-3-phosphate acyltransferase del... [more]
PLCD_MACFA3.024e-1330.301-acyl-sn-glycerol-3-phosphate acyltransferase del... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_11H12_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-11H12-O23-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043566 ID=CX043566; Name=CX043566; organism=Citrus sinensis; type=EST; length=694bp
TTTTCAGATACGAGCTGTTCCAGGTTTATAGCAGTTCCTGGAAGGATATG
GAAGAATGCAGGCCTCTCAAGTGTGATAATAGATTAAAGCGCCGTCCTTT
GACTCCTATTAGGGTTTTCAGGGGTCTGATATGTTTATTGGTGTTCTTTT
TTACTGCTTTTATGTTTCTAGTGTATTTTGCACCCATTATTGCTATCATT
TTGAGGATGTTCAGCGTCCATCACTGTAGGAAAGCAACATCCTTCCTCTT
TGGTCTTTGGCTAGCTTTATGGCCTTTTCTATTTGAAAAGATTAACAGAA
CTAATATGGTTTTTTCTGGAGATATTGTCCCAGTAGAGGAACGTGTATTA
CTTATGGCCAATCACAGAACTGAGGTTGATTGGATGTACGTGTGGGATCT
TGCATTGCGGAAGGGGTGCCTGGGCTACATAAAATACATCCTTAAGAGCA
GCTTGATGAAATTACCAGTCTTTGGTTGGGGATTTCACATTTTGGAGTTT
ATTTCAGTGGAAAGGAATTGGGAAATTGATGAACATGTCATGCGCCAAAT
GCTTTCTACTTTTAGGAATCCCAATGATCCTTTGTGGCTTACAATTTTCC
CTGAAGGAACTGACTTTACTGAAGAGAAACGTAACAGGAGTCAGAAATTT
GCAGCTGATGTTGGACTTCCTGTGCTTACTAATGTGCTGCTTCC
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