CV712489
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712489 vs. ExPASy Swiss-Prot
Match: COFI_USTMA (Cofilin OS=Ustilago maydis GN=COF1 PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 8.349e-20 Identity = 48/135 (35.56%), Postives = 82/135 (60.74%), Query Frame = 3 Query: 177 TSGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNRAN 581 +SG+ V+ + F EL+ K +Y+I+ ++ T + SY+DF A LP +CRYA+YDF+Y + +++KI F +WSP ++I+ KM++A+SKD R+ L GI EIQ TD +E+ + + ++ + Sbjct: 2 SSGVKVSQECLDKFQELKLGKKIKYIIYSLNDKNTEIVVQNTS-TSTSYDDFLAELPPTECRYAIYDFEYEKGDAGKRNKICFFSWSPDDAKIKPKMVFASSKDALRKALVGISTEIQGTDFSEVSYDTVLDKVS 135
BLAST of CV712489 vs. ExPASy Swiss-Prot
Match: COFI_SCHPO (Cofilin OS=Schizosaccharomyces pombe GN=cof1 PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.206e-18 Identity = 51/127 (40.16%), Postives = 75/127 (59.06%), Query Frame = 3 Query: 180 SGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLE 560 SG+ V+ AF EL+ K RYV+FK++ + ++ F LPE DCRYA+YDF++ E ++KI FI+WSP + I++KM+Y++SKD RR GI +IQATD +E+ E Sbjct: 4 SGVKVSPECLEAFQELKLGKSLRYVVFKMNDTKTEIVVEKKSTDKD-FDTFLGDLPEKDCRYAIYDFEFNLGEGV-RNKIIFISWSPDVAPIKSKMVYSSSKDTLRRAFTGIGTDIQATDFSEVAYE 128
BLAST of CV712489 vs. ExPASy Swiss-Prot
Match: COF1_DICDI (Cofilin-1 OS=Dictyostelium discoideum GN=cofA PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.333e-17 Identity = 46/125 (36.80%), Postives = 71/125 (56.80%), Query Frame = 3 Query: 177 TSGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEM 551 +SG+ +A + + F +L+ + + +I++I T S+++F LPEN+CRY V D+ Y E QKSKI F+AW P T+ I+ KM+ +SKD R+ GI EIQ TD +E+ Sbjct: 2 SSGIALAPNCVSTFNDLKLGRKYGGIIYRISDDSKEIIVDSTLPAGCSFDEFTKCLPENECRYVVLDYQY-KEEGAQKSKICFVAWCPDTANIKKKMMATSSKDSLRKACVGIQVEIQGTDASEV 125
BLAST of CV712489 vs. ExPASy Swiss-Prot
Match: COFI_CRYNE (Cofilin OS=Cryptococcus neoformans GN=COF1 PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.969e-17 Identity = 49/135 (36.30%), Postives = 75/135 (55.56%), Query Frame = 3 Query: 177 TSGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDY-VTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNRA 578 +SG+ F EL+ K YVI+ + + ++ F A LPE DCR+AVYDF++ + ++K+ FI WSP + ++ KM++A+SK+ RR LDGIH EIQATD +E+ + L +A Sbjct: 2 SSGVQPTQECLEKFQELKTGKKLTYVIYGLSEDKRSIVVLKASEDKD-FDSFVAELPEKDCRWAVYDFEFTLPGGEGVRNKLCFIVWSPDDASVKNKMIFASSKEAIRRRLDGIHTEIQATDFSEITKDALFEKA 135
BLAST of CV712489 vs. ExPASy Swiss-Prot
Match: CADF_DROME (Cofilin/actin-depolymerizing factor homolog OS=Drosophila melanogaster GN=tsr PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 5.065e-17 Identity = 48/140 (34.29%), Postives = 79/140 (56.43%), Query Frame = 3 Query: 180 SGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPE---NDCRYAVYDFDYV-----TSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNR 575 SG+ V+D K + E+++ K HRYVIF I AE Y+ F + + +CRY ++DF+Y+ TSE+ +K K+F ++W P T++++ KMLY++S D ++ L G+ IQATD +E E + + Sbjct: 3 SGVTVSDVCKTTYEEIKKDKKHRYVIFYIRDEKQIDVETVADRNAE-YDQFLEDIQKCGPGECRYGLFDFEYMHQCQGTSESSKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASREAVEEK 141
BLAST of CV712489 vs. ExPASy Swiss-Prot
Match: COF4_DICDI (Cofilin-4 OS=Dictyostelium discoideum GN=cofE PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.168e-13 Identity = 34/87 (39.08%), Postives = 57/87 (65.52%), Query Frame = 3 Query: 315 ESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELRNR 575 ES+ED+ P++DCRY VYDF Y+ ++ +K+KIFFI+W P ++I+ K+++ ++ ++L GI I+ATD TE+ + R Sbjct: 47 ESFEDYINKFPQDDCRYGVYDFSYMDNKENKKNKIFFISWCPVETKIKNKIVHTATEQSIYKKLVGIDAIIKATDNTEISQSLVEER 133
BLAST of CV712489 vs. ExPASy Swiss-Prot
Match: CADF2_PLAFX (Cofilin/actin-depolymerizing factor homolog 2 OS=Plasmodium falciparum (isolate HB3) PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.795e-13 Identity = 42/135 (31.11%), Postives = 72/135 (53.33%), Query Frame = 3 Query: 180 SGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXXT-GGPAESYEDFAAALPEN----DCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELR 569 SG+ V+D F +L+ K +H+Y+I++I+ +SY+D + N +CRY + D T E +++I+FI WSP ++ + KMLYA+SK+ R+++GI ++ T E +ELR Sbjct: 3 SGVKVSDECVYEFNKLKIKHIHKYIIYRIENYEEVIVDFLEQDNSLKSYKDIIIDIRNNLKTTECRYIIADMPIPTPEGVLRNRIYFIFWSPDLAKSKEKMLYASSKEYLVRKINGIFKSLEITCDLEDFEDELR 137
BLAST of CV712489 vs. ExPASy Swiss-Prot
Match: CADF2_PLAF7 (Cofilin/actin-depolymerizing factor homolog 2 OS=Plasmodium falciparum (isolate 3D7) GN=PF13_0326 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.795e-13 Identity = 42/135 (31.11%), Postives = 72/135 (53.33%), Query Frame = 3 Query: 180 SGMGVADHSKNAFTELQRKKVHRYVIFKIDXXXXXXXXXXT-GGPAESYEDFAAALPEN----DCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELR 569 SG+ V+D F +L+ K +H+Y+I++I+ +SY+D + N +CRY + D T E +++I+FI WSP ++ + KMLYA+SK+ R+++GI ++ T E +ELR Sbjct: 3 SGVKVSDECVYEFNKLKIKHIHKYIIYRIENYEEVIVDFLEQDNSLKSYKDIIIDIRNNLKTTECRYIIADMPIPTPEGVLRNRIYFIFWSPDLAKSKEKMLYASSKEYLVRKINGIFKSLEITCDLEDFEDELR 137
BLAST of CV712489 vs. ExPASy Swiss-Prot
Match: DEST_PIG (Destrin OS=Sus scrofa GN=DSTN PE=1 SV=3) HSP 1 Score: 74.3294 bits (181), Expect = 7.569e-13 Identity = 30/80 (37.50%), Postives = 53/80 (66.25%), Query Frame = 3 Query: 315 ESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMD 554 + ++ F LPE DCRYA+YD + T E+ +K ++ F W+P + +++KM+YA+SKD +++ GI +E QA P +++ Sbjct: 66 DPFKHFVGMLPEKDCRYALYDASFETKES-RKEELMFFLWAPELAPLKSKMIYASSKDAIKKKFQGIKHECQANGPEDLN 144
BLAST of CV712489 vs. ExPASy Swiss-Prot
Match: DEST_HUMAN (Destrin OS=Homo sapiens GN=DSTN PE=1 SV=3) HSP 1 Score: 74.3294 bits (181), Expect = 7.569e-13 Identity = 30/80 (37.50%), Postives = 53/80 (66.25%), Query Frame = 3 Query: 315 ESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMD 554 + ++ F LPE DCRYA+YD + T E+ +K ++ F W+P + +++KM+YA+SKD +++ GI +E QA P +++ Sbjct: 66 DPFKHFVGMLPEKDCRYALYDASFETKES-RKEELMFFLWAPELAPLKSKMIYASSKDAIKKKFQGIKHECQANGPEDLN 144 The following BLAST results are available for this feature:
BLAST of CV712489 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 70
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712489 ID=CV712489; Name=CV712489; organism=Citrus sinensis; type=EST; length=741bpback to top |