CV712486

Overview
NameCV712486
Unique NameCV712486
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length810
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712486 vs. ExPASy Swiss-Prot
Match: R13L2_ARATH (Putative disease resistance RPP13-like protein 2 OS=Arabidopsis thaliana GN=RPP13L2 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.496e-20
Identity = 70/231 (30.30%), Postives = 110/231 (47.62%), Query Frame = 2
Query:  125 LFNNDGLKTHFSSRAWVTVGKEYNKNELLRTVIKEFHSFSGQPTPVEIHKMEEMELITTLRGHLKDKNYMVVFDDVWKIDFWGDVEHALLDNKKCGRIIVTTRHMNVAKACKSSSPVHIHELETLPPNEAWKLFCRKAXXXXXXXXXXXELKELSQDILGKCEGLPLAIVAVGGLLSTKNRVVSEWKKLFDRLGSILGSDPHLKDCNRVLSE----GYHDLPHHLKSCLLY 805
            LFN+  +K  F  R W  V  E N  ++L  +I      S      E+ KM + EL   L   L++K Y+VV DD+W+ +    ++ AL  + +  R+I+TT    VA+       V+ H +  L   E+W LF +KA           EL+++ ++++ KC GLP   V + GL+S K    +EW  ++  L         +KD N  +S      + D+ H LK C LY
Sbjct:  204 LFNSSDVKESFEYRVWTNVSGECNTRDILMRIISSLEETSEG----ELEKMAQQELEVYLHDILQEKRYLVVVDDIWESEALESLKRALPCSYQGSRVIITTSIRVVAEG--RDKRVYTHNIRFLTFKESWNLFEKKA--FRYILKVDQELQKIGKEMVQKCGGLPRTTVVLAGLMSRKK--PNEWNDVWSSL--------RVKDDNIHVSSLFDLSFKDMGHELKLCFLY 416          
BLAST of CV712486 vs. ExPASy Swiss-Prot
Match: DRL8_ARATH (Putative disease resistance protein At1g58400 OS=Arabidopsis thaliana GN=At1g58400 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.954e-20
Identity = 71/234 (30.34%), Postives = 120/234 (51.28%), Query Frame = 2
Query:  125 LFNNDGLKTHFSSRAWVTVGKEYNKNELLRTVIKEFHSFSGQPTPVEIHKMEEMELITTLRGHLKDKNYMVVFDDVWKIDFWGDVEHALLDNKKCGRIIVTTRHMNVAKACKSSSPVHIHELETLPPNEAWKLFCRKA--XXXXXXXXXXXELKELSQDILGKCEGLPLAIVAVGGLLSTKNRVVSEWKKLFDRLG-SILG----SDPHLKDCNRVLSEGYHDLPHHLKSCLLY 805
            +FN++ +K  F   AWV V +E+ +  + + +++   S   + T  EI +MEE EL   L   L+    ++VFDD+WK + WG + + +   KK  ++++T+R   +  A   +      + E L   E+W LF R A             E++ + + ++  C GLPLA+  +GGLL+ K     +WK+L + +G  I+G    SD +      VLS  + +LP +LK C LY
Sbjct:  204 VFNHEDVKHQFDRLAWVCVSQEFTRKNVWQMILQNLTS---RETKDEILQMEEAELHDELFQLLETSKSLIVFDDIWKEEDWGLI-NPIFPPKKGWKVLITSRTETI--AMHGNRRYVNFKPECLTILESWILFQRIAMPRVDESEFKVDKEMEMMGKQMIKYCGGLPLAVKVLGGLLAAK-YTFHDWKRLSENIGCHIVGRTDFSDGNNSSVYHVLSLSFEELPSYLKHCFLY 430          
BLAST of CV712486 vs. ExPASy Swiss-Prot
Match: RP8L2_ARATH (Probable disease resistance RPP8-like protein 2 OS=Arabidopsis thaliana GN=RPP8L2 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 7.427e-20
Identity = 66/236 (27.97%), Postives = 124/236 (52.54%), Query Frame = 2
Query:  125 LFNNDGLKTHFSSRAWVTVGKEYNKNELLRTVIKEFHSFSGQPTPVEIHKMEEMELITTLRGHLKDKNYMVVFDDVWKIDFWGDVEHALLDNKKCGRIIVTTRH----MNVAKACKSSSPVHIHELETLPPNEAWKLFCRKAXXXXXXXXXXXELKELSQDILGKCEGLPLAIVAVGGLLSTKNRVVSEWKKLFDRLGS-ILG----SDPHLKDCNRVLSEGYHDLPHHLKSCLLY 805
            +F++D ++ HF   +WV V +++ + ++ + ++++      +P    I +M+E  L   L   L+   Y++V DDVWK + W  ++ A+  +K+  ++++T+R+    ++    C +  P        L P ++WKLF R             + + + ++++  C GLPLA+  +GGLL+ K+ V+ EWK++   + + I+G    SD +     RVLS  Y DLP  LK C  Y
Sbjct:  203 VFHHDIVRRHFDGFSWVCVSQQFTRKDVWQRILQDL-----RPYDEGIIQMDEYTLQGELFELLESGRYLLVLDDVWKEEDWDRIK-AVFPHKRGWKMLLTSRNEGLGLHADPTCFAFRP------RILTPEQSWKLFERIVSSRRDKTEFKVD-EAMGKEMVTYCGGLPLAVKVLGGLLAKKHTVL-EWKRVHSNIVTHIVGKSGLSDDNSNSVYRVLSLSYEDLPMQLKHCFFY 424          
BLAST of CV712486 vs. ExPASy Swiss-Prot
Match: R1B8_SOLDE (Putative late blight resistance protein homolog R1B-8 OS=Solanum demissum GN=R1B-8 PE=5 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 9.699e-20
Identity = 63/175 (36.00%), Postives = 87/175 (49.71%), Query Frame = 2
Query:  287 ELITTLRGHLKDKNYMVVFDDVWKIDFWGDVEHALLDNKKCGRIIVTTRHMNVAK-ACKSSSPVHIHELETLPPNEAWKLFCRKAXXXXXXXXXXXELKELSQDILGKCEGLPLAIVAVGGLLSTKNRVVSEWKKLFDRLGSILGSDPHLKDCNRVLSEGYHDLPHHLKSCLLYF 808
            EL   LR  L  + Y+++ DDVW+   W D+     D     RII+ TRH  VAK A     P+H   L  L  +E+WKL  +K             LK +   I   C  LPL+IV V G+LS   + V  W+++ + LGS + +     D   ++ + YH LP HLKSC LYF
Sbjct:  549 ELADKLRKTLLRRRYLILVDDVWENSVWDDLRGWFPDANNRSRIILMTRHHEVAKYASVHGDPLH---LRMLDEDESWKLLEKKVFGEQSCSSPL--LKNVGLRIAKMCGQLPLSIVLVAGILSEMEKEVECWEQVANNLGSHIHN-----DSRAIVDQSYHVLPCHLKSCFLYF 713          
BLAST of CV712486 vs. ExPASy Swiss-Prot
Match: DRL7_ARATH (Probable disease resistance protein At1g58390 OS=Arabidopsis thaliana GN=At1g58390 PE=2 SV=3)

HSP 1 Score: 96.2857 bits (238), Expect = 2.161e-19
Identity = 68/231 (29.44%), Postives = 120/231 (51.95%), Query Frame = 2
Query:  125 LFNNDGLKTHFSSRAWVTVGKEYNKNELLRTVIKEFHSFSGQPTPVEIHKMEEMELITTLRGHLKDKNYMVVFDDVWKIDFWGDVEHALLDNKKCGRIIVTTRHMNVAKACKSSSPVHIHELETLPPNEAWKLFCRKA--XXXXXXXXXXXELKELSQDILGKCEGLPLAIVAVGGLLSTKNRVVSEWKKLFDRLGS-ILG-SDPHLKDCNRVLSEGYHDLPHHLKSCLLY 805
            +FN++ +K  F   AWV V +E+ +  + + +++   S   +    EI +MEE EL   L   L+    ++VFDD+WK + W D+   +    K  ++++T+++ +V  A +        + E L   ++W LF R A             E++++ + +L  C GLPLAI  +GGLL+ K   + +W++L   +GS I+G +  +      VLS  + +LP +LK C LY
Sbjct:  203 VFNHEDVKHQFDRLAWVCVSQEFTRKNVWQMILQNLTSREKKD---EILQMEEAELHDKLFQLLETSKSLIVFDDIWKDEDW-DLIKPIFPPNKGWKVLLTSQNESV--AVRGDIKYLNFKPECLAIEDSWTLFQRIAFPKKDASESKVDEEMEDMGKQMLKHCGGLPLAIKVLGGLLAAK-YTMHDWERLSVNIGSDIVGRTSSNNSSIYHVLSMSFEELPSYLKHCFLY 426          
BLAST of CV712486 vs. ExPASy Swiss-Prot
Match: DRL4_ARATH (Putative disease resistance protein At1g50180 OS=Arabidopsis thaliana GN=At1g50180 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.814e-19
Identity = 73/276 (26.45%), Postives = 130/276 (47.10%), Query Frame = 2
Query:    2 LWGIESIKRKLIDLMVNGRSERSXXXXXXXXXXXXXXXXXXLFNNDGLKTHFSSRAWVTVGKEYNKNELLRTVIKEFHSFSGQPTPVEIHKMEEMELITTLRGHLKDKNYMVVFDDVWKIDFWGDVEHALLDNKKCGRIIVTTRHMNVAKACKSSSPVHIHELETLPPNEAWKLFCR--KAXXXXXXXXXXXELKELSQDILGKCEGLPLAIVAVGGLLSTKNRVVSEWKKLFDRLGSIL---GSDPHLKD--CNRVLSEGYHDLPHHLKSCLLYF 808
            L G+E    KL++ +V+G  +                    +F++  ++ HF   AWV V ++  +  + + +   F + S +     I  + + +L   L   LK    ++V DD+W  D W  ++H +  ++    II+TTR+  VA          +HE + L   E+W+L  +   +           +++E+ + I+ +C GLPLAI  +GGLL+TK+   +EW+++ + + S +   GS    K+     VL   Y  LP H+K C LYF
Sbjct:  164 LVGLEQSLEKLVNDLVSGGEKLRVTSICGMGGLGKTTLAKQIFHHHKVRRHFDRFAWVYVSQDCRRRHVWQDI---FLNLSYKDENQRILSLRDEQLGEELHRFLKRNKCLIVLDDIWGKDAWDCLKH-VFPHETGSEIILTTRNKEVALYADPRGV--LHEPQLLTCEESWELLEKISLSGRENIEPMLVKKMEEIGKQIVVRCGGLPLAITVLGGLLATKS-TWNEWQRVCENIKSYVSNGGSSNGSKNMLVADVLCLSYEYLPPHVKQCFLYF 432          
BLAST of CV712486 vs. ExPASy Swiss-Prot
Match: DRL13_ARATH (Putative disease resistance protein At1g59780 OS=Arabidopsis thaliana GN=At1g59780 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.814e-19
Identity = 63/237 (26.58%), Postives = 117/237 (49.37%), Query Frame = 2
Query:  125 LFNNDGLKTHFSSRAWVTVGKEYNKNELLRTVIKEFHSFSGQPTP-VEIHKMEEMELITTLRGHLKDKNYMVVFDDVWKIDFWGDVEHALLDNKKCGRIIVTTRHMNVAKACKSSSPVHIHELETLPPNEAWKLFCRKA---XXXXXXXXXXXELKELSQDILGKCEGLPLAIVAVGGLLSTKNRVVSEWKKLFDRL------GSILGSDPHLKDCNRVLSEGYHDLPHHLKSCLLY 805
            +F++D +K+HF   AWV V +E+ + ++ +T++       G  +P  +   + E ++   L   L+ K  ++VFDD+WK + W  +     + K   ++++T+R+  +   C +  P      E L  +E WKL  R A              E+ ++++++   C+ LPLA+  +GGLL  K+  + +WK + + +      G    ++      N VLS  +  LP +LK CLLY
Sbjct:  200 IFDHDKVKSHFDGLAWVCVSQEFTRKDVWKTIL-------GNLSPKYKDSDLPEDDIQKKLFQLLETKKALIVFDDLWKREDWYRIAPMFPERKAGWKVLLTSRNDAIHPHCVTFKP------ELLTHDECWKLLQRIAFSKQKTITGYIIDKEMVKMAKEMTKHCKRLPLAVKLLGGLLDAKH-TLRQWKLISENIISHIVVGGTSSNENDSSSVNHVLSLSFEGLPGYLKHCLLY 422          
BLAST of CV712486 vs. ExPASy Swiss-Prot
Match: DRL12_ARATH (Probable disease resistance protein At1g59620 OS=Arabidopsis thaliana GN=At1g59620 PE=2 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 4.814e-19
Identity = 68/275 (24.73%), Postives = 135/275 (49.09%), Query Frame = 2
Query:    2 LWGIESIKRKLIDLMVNGRSERSXXXXXXXXXXXXXXXXXXLFNNDGLKTHFSSRAWVTVGKEYNKNELLRTVIKEFHSFSGQPTPVEIHKMEEMELITTLRGHLKDKNYMVVFDDVWKIDFWGDVEHALLDNKKCGRIIVTTRHMNVAKACKSSSPVHIHELETLPPNEAWKLFCRKAXXXXXXXXXXXE--LKELSQDILGKCEGLPLAIVAVGGLLSTKNRVVSEWKKLFDRLGS-ILG----SDPHLKDCNRVLSEGYHDLPHHLKSCLLY 805
            L G+E   +KL+  +V                         +FN++ +K+HF+  AWV V +++ +  + +T++++       P  +++ +M E EL   L   L  +  ++V DD+W+ + W D+   +    K  ++++T+R+  V  A +++    I + + L P E+W +F R             +  ++EL + ++  C GLPLA+  +GGLL   +  + EWK+++  + S I+G    +D ++     +L   + +LP +LK C LY
Sbjct:  139 LVGLEENVKKLVGHLVEVEDSSQVVSITGMGGIGKTTLARQVFNHETVKSHFAQLAWVCVSQQFTRKYVWQTILRKV-----GPEYIKL-EMTEDELQEKLFRLLGTRKALIVLDDIWREEDW-DMIEPIFPLGKGWKVLLTSRNEGV--ALRANPNGFIFKPDCLTPEESWTIFRRIVFPGENTTEYKVDEKMEELGKQMIKHCGGLPLALKVLGGLL-VVHFTLDEWKRIYGNIKSHIVGGTSFNDKNMSSVYHILHLSFEELPIYLKHCFLY 403          
BLAST of CV712486 vs. ExPASy Swiss-Prot
Match: RX24L_ARATH (Probable disease resistance protein RXW24L OS=Arabidopsis thaliana GN=RXW24L PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.829e-18
Identity = 61/231 (26.41%), Postives = 120/231 (51.95%), Query Frame = 2
Query:  125 LFNNDGLKTHFSSRAWVTVGKEYNKNELLRTVIKEFHSFSGQPTPVEIHKMEEMELITTLRGHLKDKNYMVVFDDVWKIDFWGDVEHALLDNKKCGRIIVTTRHMNVAKACKSSSPVHIHELETLPPNEAWKLFCRKA--XXXXXXXXXXXELKELSQDILGKCEGLPLAIVAVGGLLSTKNRVVSEWKKLFDRLGS--ILGSDPHLKDCNRVLSEGYHDLPHHLKSCLLY 805
            +FN+D +K  F   AWV+V +E+ +  + +T+++   + + +    EI  M+E +L   L   L+    ++V DD+WK + W D+   +   KK  ++++T+R  ++  A +  +     + + L   ++W LF   A             E++ + + ++  C GL LA+  +GGLL+ K   + +WK+L + +GS  +  +  +    + VLS  + +LP++LK C LY
Sbjct:  202 VFNHDVVKDRFDGFAWVSVSQEFTRISVWQTILQ---NLTSKERKDEIQNMKEADLHDDLFRLLESSKTLIVLDDIWKEEDW-DLIKPIFPPKKGWKVLLTSRTESI--AMRGDTTYISFKPKCLSIPDSWTLFQSIAMPRKDTSEFKVDEEMENMGKKMIKHCGGLSLAVKVLGGLLAAK-YTLHDWKRLSENIGSHIVERTSGNNSSIDHVLSVSFEELPNYLKHCFLY 425          
BLAST of CV712486 vs. ExPASy Swiss-Prot
Match: R13L1_ARATH (Putative disease resistance RPP13-like protein 1 OS=Arabidopsis thaliana GN=RPPL1 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.829e-18
Identity = 62/230 (26.96%), Postives = 116/230 (50.43%), Query Frame = 2
Query:  125 LFNNDGLKTHFSSRAWVTVGKEYNKNELLRTVIKEFHSFSGQPTPVEIHKMEEMELITTLRGHLKDKNYMVVFDDVWKIDF--WGDVEHALLDNKKCGRIIVTTRHMNVAKACKSSSPVHIHELETLPPNEAWKLFCRKAXXXXXXXXXXXELKELSQDILGKCEGLPLAIVAVGGLLSTKNRVVSEWKK-LFDRLGSILGSDPHLKDCNRVLSEGYHDLPHHLKSCLLY 805
            L+N+  ++++F ++ W  V +E++  ++ + V +   S   + T +++ +++  E +T          +++V DD+W  +F  W  +    +   +  +I+VTTR   VA    +   VH+H L+ L   + W LF  K            E+ +L++ I+ KC GLPLA+  +GG+L  + +V+ EW++ L  R+  +     +L     VL   Y+ LP HLK C  Y
Sbjct:  216 LYNDQHVRSYFGTKVWAHVSEEFDVFKITKKVYESVTSRPCEFTDLDVLQVKLKERLTGT-----GLPFLLVLDDLWNENFADWDLLRQPFIHAAQGSQILVTTRSQRVASIMCA---VHVHNLQPLSDGDCWSLFM-KTVFGNQEPCLNREIGDLAERIVHKCRGLPLAVKTLGGVLRFEGKVI-EWERVLSSRIWDLPADKSNLLP---VLRVSYYYLPAHLKRCFAY 432          
The following BLAST results are available for this feature:
BLAST of CV712486 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
R13L2_ARATH1.496e-2030.30Putative disease resistance RPP13-like protein 2 O... [more]
DRL8_ARATH1.954e-2030.34Putative disease resistance protein At1g58400 OS=A... [more]
RP8L2_ARATH7.427e-2027.97Probable disease resistance RPP8-like protein 2 OS... [more]
R1B8_SOLDE9.699e-2036.00Putative late blight resistance protein homolog R1... [more]
DRL7_ARATH2.161e-1929.44Probable disease resistance protein At1g58390 OS=A... [more]
DRL4_ARATH4.814e-1926.45Putative disease resistance protein At1g50180 OS=A... [more]
DRL13_ARATH4.814e-1926.58Putative disease resistance protein At1g59780 OS=A... [more]
DRL12_ARATH4.814e-1924.73Probable disease resistance protein At1g59620 OS=A... [more]
RX24L_ARATH1.829e-1826.41Probable disease resistance protein RXW24L OS=Arab... [more]
R13L1_ARATH1.829e-1826.96Putative disease resistance RPP13-like protein 1 O... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001H08_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712486 ID=CV712486; Name=CV712486; organism=Citrus sinensis; type=EST; length=810bp
GTTGTGGGGGATCGAATCCATTAAACGTAAATTGATTGATTTGATGGTGA
ACGGAAGATCCGAACGTTCAGTGGTTGCTGTGGTGGGTGTAGGAGGGCTA
GGCAAGACCACTCTTGCTGGAAAACTTTTTAACAATGATGGTTTAAAAAC
TCACTTCAGTAGCCGGGCTTGGGTCACCGTTGGGAAAGAATACAACAAAA
ATGAATTGTTGAGGACAGTTATAAAGGAGTTTCACAGTTTCTCAGGGCAG
CCTACTCCAGTCGAGATACACAAAATGGAAGAGATGGAGCTGATCACCAC
GCTGAGGGGCCACTTGAAGGACAAGAATTACATGGTTGTGTTCGACGATG
TTTGGAAGATTGATTTTTGGGGAGACGTGGAGCATGCTTTACTTGATAAC
AAGAAATGCGGCAGGATAATTGTCACAACACGGCACATGAATGTCGCTAA
GGCTTGCAAATCATCTTCCCCTGTTCATATCCATGAGCTTGAAACTTTGC
CTCCGAATGAAGCGTGGAAACTTTTTTGTAGAAAGGCTTCCGGACCAAGC
TCCGGAGGCTGTTGTCCTTCAGAGTTGAAGGAGTTGTCCCAGGACATCCT
TGGAAAATGTGAAGGTTTGCCTCTTGCTATCGTGGCCGTAGGTGGACTTC
TTTCAACCAAGAACAGGGTTGTATCTGAATGGAAGAAATTATTTGATCGG
TTGGGCTCAATCTTAGGAAGTGATCCCCATCTAAAAGACTGCAACAGAGT
TTTATCTGAAGGATATCATGATCTTCCTCACCATCTCAAATCATGTCTTC
TGTACTTTGG
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