CV712481
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712481 vs. ExPASy Swiss-Prot
Match: CCSA_POPAL (Cytochrome c biogenesis protein ccsA OS=Populus alba GN=ccsA PE=3 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 1.133e-59 Identity = 118/192 (61.46%), Postives = 137/192 (71.35%), Query Frame = -1 Query: 2 HFPLSDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSL--SARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNW 571 H P+SDLYE IH + FK ++N+LS ITAPS FFTQGFAT G LT MHQS+ILVPALQ QWL+MHVSMMV GY LVITFRKVIR+ K N +N SF EIQYM EKK++F N+ S+RNYYR+Q+IQQLD W +RI+S+GF+FLT GILSGAVWANEAWGSYWNW Sbjct: 65 HLPISDLYESLIFLSWIFSIIHMVPYFKKHKNYLSTITAPSTFFTQGFATWGLLTDMHQSKILVPALQSQWLIMHVSMMVSGYAALLCGSLLSAALLVITFRKVIRIVGKNNNL--LNDSFPVDEIQYMMEKKSIFKNTFFPSSRNYYRFQLIQQLDHWGFRILSIGFLFLTIGILSGAVWANEAWGSYWNW 254
BLAST of CV712481 vs. ExPASy Swiss-Prot
Match: CCSA_ACOCL (Cytochrome c biogenesis protein ccsA OS=Acorus calamus GN=ccsA PE=3 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 3.296e-59 Identity = 120/192 (62.50%), Postives = 138/192 (71.88%), Query Frame = -1 Query: 2 HFPLSDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSL--SARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNW 571 HFPLSDLYE IH + F+N++NH SAITAPSA FTQGFATSG LT+MHQS ILVPALQ QWLMMHVSMM+L Y LVITFRK +F KR NF + SF F EI+Y+NEK++V N+ S NY++YQ+ Q+LD WSYR+ISLGFIFLT GILSGAVWANEAWGSYWNW Sbjct: 65 HFPLSDLYESLIFLSWSFSIIHMVPYFRNHRNHFSAITAPSAIFTQGFATSGLLTEMHQSIILVPALQSQWLMMHVSMMLLSYAALLCGSLLSVALLVITFRKNSDIFDKRNNF--LIRSFFFGEIEYLNEKRSVLQNTSFDSFTNYHKYQLTQRLDFWSYRVISLGFIFLTIGILSGAVWANEAWGSYWNW 254
BLAST of CV712481 vs. ExPASy Swiss-Prot
Match: CCSA_ACOAM (Cytochrome c biogenesis protein ccsA OS=Acorus americanus GN=ccsA PE=3 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 3.296e-59 Identity = 120/192 (62.50%), Postives = 138/192 (71.88%), Query Frame = -1 Query: 2 HFPLSDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSL--SARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNW 571 HFPLSDLYE IH + F+N++NH SAITAPSA FTQGFATSG LT+MHQS ILVPALQ QWLMMHVSMM+L Y LVITFRK +F KR NF + SF F EI+Y+NEK++V N+ S NY++YQ+ Q+LD WSYR+ISLGFIFLT GILSGAVWANEAWGSYWNW Sbjct: 65 HFPLSDLYESLIFLSWSFSIIHMVPYFRNHRNHFSAITAPSAIFTQGFATSGLLTEMHQSIILVPALQSQWLMMHVSMMLLSYAALLCGSLLSVALLVITFRKNSDIFDKRNNF--LIRSFFFGEIEYLNEKRSVLQNTSFDSFTNYHKYQLTQRLDFWSYRVISLGFIFLTIGILSGAVWANEAWGSYWNW 254
BLAST of CV712481 vs. ExPASy Swiss-Prot
Match: CCSA_POPTR (Cytochrome c biogenesis protein ccsA OS=Populus trichocarpa GN=ccsA PE=3 SV=1) HSP 1 Score: 226.868 bits (577), Expect = 5.623e-59 Identity = 117/192 (60.94%), Postives = 136/192 (70.83%), Query Frame = -1 Query: 2 HFPLSDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSL--SARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNW 571 H P+SDLYE IH + FK ++N+LS ITAPS FFTQGFAT G LT MHQS+ILVPALQ QWL+MHVSMMV GY LVITFRKVIR+ K N +N SF EIQYM EKK++ N+ S+RNYYR+Q+IQQLD W +RI+S+GF+FLT GILSGAVWANEAWGSYWNW Sbjct: 65 HLPISDLYESLIFLSWIFSIIHMVPYFKKHKNYLSTITAPSTFFTQGFATWGLLTDMHQSKILVPALQSQWLIMHVSMMVSGYAALLCGSLLSAALLVITFRKVIRIVGKNNNL--LNDSFPVDEIQYMMEKKSILKNTFFPSSRNYYRFQLIQQLDHWGFRILSIGFLFLTIGILSGAVWANEAWGSYWNW 254
BLAST of CV712481 vs. ExPASy Swiss-Prot
Match: CCSA_SPIOL (Cytochrome c biogenesis protein ccsA OS=Spinacia oleracea GN=ccsA PE=3 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 2.137e-58 Identity = 122/194 (62.89%), Postives = 139/194 (71.65%), Query Frame = -1 Query: 2 HFPLSDLYEXXXXXXXXXXXIHKIFDF-KNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRK-VIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSLSA--RNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNW 571 HFPLSDLYE IH I F K +N L+ ITAPSA FTQGFATSG LT+MHQS ILVPALQ QWLMMHVSMMVLGY L+I F+K +I++F KRK+ + N SF F EIQY+NEK N+ N+ + RNYYR Q+I+QLD WSYR+ISLGFIFLT GILSGAVWANEAWGSYWNW Sbjct: 65 HFPLSDLYESLIFLSWSFYLIHMIPSFLKKEKNSLNVITAPSAIFTQGFATSGLLTEMHQSGILVPALQSQWLMMHVSMMVLGYAALLGGSLLSVTLLIIIFQKDLIQVFDKRKHLL--NESFFFGEIQYINEKSNIVQNASPSYVRNYYRSQLIEQLDHWSYRVISLGFIFLTIGILSGAVWANEAWGSYWNW 256
BLAST of CV712481 vs. ExPASy Swiss-Prot
Match: CCSA_CERDE (Cytochrome c biogenesis protein ccsA OS=Ceratophyllum demersum GN=ccsA PE=3 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 2.791e-58 Identity = 118/192 (61.46%), Postives = 135/192 (70.31%), Query Frame = -1 Query: 2 HFPLSDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS--LSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNW 571 HFPLS+LYE IH + F N++N LS IT PSA FTQGFATSG LT+MHQS ILVPALQ QWLMMHVSMM+L Y LVITFR+ I LF KR + G F F EIQY+NEK++V N+ LS +NY+RYQ+ ++LD WSYRIISLGF FLT GILSGAVWANEAWGSYWNW Sbjct: 65 HFPLSNLYESLMFLSWSFSIIHMVPYFGNHKNDLSVITNPSAIFTQGFATSGLLTEMHQSSILVPALQSQWLMMHVSMMLLSYAALLCGSLLSVALLVITFRQSIDLFFKRDQL--LTGGFSFGEIQYLNEKRSVLQNTSFLSFKNYHRYQLTRRLDHWSYRIISLGFTFLTIGILSGAVWANEAWGSYWNW 254
BLAST of CV712481 vs. ExPASy Swiss-Prot
Match: CCSA_LIRTU (Cytochrome c biogenesis protein ccsA OS=Liriodendron tulipifera GN=ccsA PE=3 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.060e-57 Identity = 119/192 (61.98%), Postives = 134/192 (69.79%), Query Frame = -1 Query: 2 HFPLSDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS--LSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNW 571 HFPLSDLYE IH + N++N LSAITAPSA FTQGFATSG T+MHQS ILVPALQ QWLMMHVSMM+L Y LVITFRK I + K + + GSF F EI Y+NEK+NV N+ LS RNY+RYQ+ Q+LD WSYR+ISLGF FLT GILSGAVWANEAWGSYWNW Sbjct: 65 HFPLSDLYESLMFLSWSFSIIHMVPKIWNHKNDLSAITAPSAIFTQGFATSGLSTEMHQSAILVPALQSQWLMMHVSMMLLSYAALLCGSLLSVALLVITFRKNIGIVGKSNHL--LIGSFSFDEIHYLNEKRNVLQNTSFLSFRNYHRYQLTQRLDYWSYRVISLGFTFLTIGILSGAVWANEAWGSYWNW 254
BLAST of CV712481 vs. ExPASy Swiss-Prot
Match: CCSA_CUCSA (Cytochrome c biogenesis protein ccsA OS=Cucumis sativus GN=ccsA PE=3 SV=1) HSP 1 Score: 222.246 bits (565), Expect = 1.385e-57 Identity = 118/194 (60.82%), Postives = 133/194 (68.56%), Query Frame = -1 Query: 2 HFPLSDLYEXXXXXXXXXXXIHKIFDFKNNQNHLS--AITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS--LSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNW 571 H PLSDLYE IH FK +NHLS AITAPS FTQGFATSGFLT+MHQS +LVPALQ WLMMHVSMMVLGY +VITF+K IR+F K N +N F F+EIQY+NE N+ S++NYY+ Q+IQQLD WSYRIISLGFIFL+ GILSGAVWANE WGSYWNW Sbjct: 65 HLPLSDLYESLLFLSWAFSIIHLFTYFKKYKNHLSVSAITAPSTIFTQGFATSGFLTEMHQSPLLVPALQSHWLMMHVSMMVLGYAALLCGSLFSVALIVITFQKAIRIFCKNNNL--LNALFSFNEIQYINEGNYFVRNTSFFSSKNYYKSQLIQQLDHWSYRIISLGFIFLSIGILSGAVWANETWGSYWNW 256
BLAST of CV712481 vs. ExPASy Swiss-Prot
Match: CCSA_PHAAO (Cytochrome c biogenesis protein ccsA OS=Phalaenopsis aphrodite subsp. formosana GN=ccsA PE=3 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 4.030e-57 Identity = 112/192 (58.33%), Postives = 132/192 (68.75%), Query Frame = -1 Query: 2 HFPLSDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS--LSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNW 571 HFPLS+LYE IH I +N +N L+AITAPSA FTQGFATSG T+MHQ ILVPALQ QWLMMHVSMM+L Y +VITF+K FLK KNF + SF F ++Y+NEK ++ + LS +N+Y+YQ+IQ LD WSYR+ISLGF FLT GILSGAVWANEAWGSYWNW Sbjct: 65 HFPLSNLYESLIFLSWSLSIIHIILYIRNYKNDLNAITAPSAIFTQGFATSGLSTEMHQPAILVPALQSQWLMMHVSMMLLSYAALLCGSLLSVALIVITFQKKTDFFLKNKNFYSLRKSFFFGNMEYLNEKGSILKKTSLLSFKNFYKYQLIQHLDSWSYRVISLGFTFLTIGILSGAVWANEAWGSYWNW 256
BLAST of CV712481 vs. ExPASy Swiss-Prot
Match: CCSA_NANDO (Cytochrome c biogenesis protein ccsA OS=Nandina domestica GN=ccsA PE=3 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 5.263e-57 Identity = 118/192 (61.46%), Postives = 133/192 (69.27%), Query Frame = -1 Query: 2 HFPLSDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS--LSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNW 571 HFPLSDLYE IH + F N++N LS ITAPSA FTQGFATSG LT+MH+S LVPALQ QWLMMHVSMM+L Y LVITFRK + F K K+ + G F F EI+Y+NE NV N+ +S RN+ RYQVIQQLD WS R+ISLGFIFLT GILSGAVWANEAWGSYWNW Sbjct: 65 HFPLSDLYESLMFLSWSFSIIHMVPYFTNHKNLLSTITAPSAIFTQGFATSGLLTEMHRSTKLVPALQSQWLMMHVSMMILSYAALLCGSLLSIALLVITFRKNVENFGKSKSNPFLIGPFSFGEIKYVNEINNVLRNTFLISFRNFRRYQVIQQLDCWSCRVISLGFIFLTIGILSGAVWANEAWGSYWNW 256 The following BLAST results are available for this feature:
BLAST of CV712481 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 132
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712481 ID=CV712481; Name=CV712481; organism=Citrus sinensis; type=EST; length=571bpback to top |