CV712481
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712481 vs. ExPASy Swiss-Prot
Match: CCSA_PROM0 (Cytochrome c biogenesis protein ccsA OS=Prochlorococcus marinus (strain MIT 9301) GN=ccsA PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.121e-17 Identity = 58/190 (30.53%), Postives = 90/190 (47.37%), Query Frame = -1 Query: 2 HFPLSDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSLSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNW 571 HFP+S+LYE + + + + +I P FA + S LVPAL+ WL+MHVS+++L Y L I K +++ R + + G F S +N+ + S+ + ++LD SYR I +GF+ LT G++SGAVWANEAWG++W+W Sbjct: 70 HFPISNLYESLYFLAWGITLGQLLVEREYQAPIIPSIAIPIELLIVSFACFVLPEDLKSSSNLVPALRSSWLVMHVSVVMLSYAALIIGSLLSMSVLFINKNKPLQI---RSSSTGIGG-FKLSNSYPVND----LVESIE------FSHSEELDTLSYRSILIGFVLLTLGLISGAVWANEAWGTWWSW 245
BLAST of CV712481 vs. ExPASy Swiss-Prot
Match: CCSA_SYNS3 (Cytochrome c biogenesis protein ccsA OS=Synechococcus sp. (strain CC9311) GN=ccsA PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 4.077e-17 Identity = 61/198 (30.81%), Postives = 91/198 (45.96%), Query Frame = -1 Query: 2 HFPLSDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRL--------FLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSLSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNW 571 HFP+S+LYE + + ++A P FA+ ++ ++ LVPAL+ WL+MHVS++++ Y LV + L +R G+ SE+Q LS+ + R ++ LD SYR I++GF+ LT GI+SGAVWANEAWGSYW+W Sbjct: 59 HFPISNLYESLCFLAWACTLTQLLVERSWPTPIVAAAATPMGLGCIAFASFALPDQLQEASPLVPALRSSWLVMHVSVIMVSYAALLVGSLLSVAVLVTDRGHALELRSSSIGSGGYRRAALATPLGNVGDSEVQ------------LSSVKFTRNEL---LDSLSYRTITVGFLLLTVGIISGAVWANEAWGSYWSW 241 The following BLAST results are available for this feature:
BLAST of CV712481 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 132
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712481 ID=CV712481; Name=CV712481; organism=Citrus sinensis; type=EST; length=571bpback to top |