CV712481
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712481 vs. ExPASy Swiss-Prot
Match: CCSA_PANGI (Cytochrome c biogenesis protein ccsA OS=Panax ginseng GN=ccsA PE=3 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 1.531e-56 Identity = 116/191 (60.73%), Postives = 131/191 (68.59%), Query Frame = -1 Query: 2 HFPLSDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS-LSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNW 571 HFPLSDLYE IH + FK + +LS ITA S FTQGFATSG LT++HQS ILVPALQ +WL+MHVSMM+L Y LVITFRK +F KR +N F F EIQYMNE+ NV + SA+NYYR Q+IQQLD WSYR+ISLGFIFLT GILSGAVWANEAWGSYWNW Sbjct: 65 HFPLSDLYESLIFLSWSLSVIHIVPYFKKKKKNLSTITASSVIFTQGFATSGLLTEIHQSAILVPALQSEWLIMHVSMMILSYAALLCGSLLSVALLVITFRKNRNIFCKRNPL--LNELFSFGEIQYMNERNNVLRTTFFSAKNYYRSQLIQQLDYWSYRVISLGFIFLTIGILSGAVWANEAWGSYWNW 253
BLAST of CV712481 vs. ExPASy Swiss-Prot
Match: CCSA_OENEH (Cytochrome c biogenesis protein ccsA OS=Oenothera elata subsp. hookeri GN=ccsA PE=3 SV=1) HSP 1 Score: 217.238 bits (552), Expect = 4.455e-56 Identity = 115/192 (59.90%), Postives = 133/192 (69.27%), Query Frame = -1 Query: 2 HFPLSDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS--LSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNW 571 HFPLS+LYE IH FK ++++ IT+ S FTQG TSG L++M QS ILVPALQ QWLMMHVSMMVLGY LVITFRK +R+F K+K F + SF F EIQY NE NV L++ +S++NYYR Q+IQQLDRWS RIISLGFIFLT GILSGAVWANEAWGSYWNW Sbjct: 65 HFPLSNLYESLLFLSWSFAIIHMFPYFKKQKSYVRTITSSSTIFTQGLVTSGLLSEMQQSEILVPALQSQWLMMHVSMMVLGYAALLCGSLLSVALLVITFRKALRIFSKKKAF--LKDSFSFVEIQYRNEPSNVLLSTSFISSKNYYRAQLIQQLDRWSSRIISLGFIFLTIGILSGAVWANEAWGSYWNW 254
BLAST of CV712481 vs. ExPASy Swiss-Prot
Match: CCSA_OENBI (Cytochrome c biogenesis protein ccsA OS=Oenothera biennis GN=ccsA PE=3 SV=1) HSP 1 Score: 217.238 bits (552), Expect = 4.455e-56 Identity = 115/192 (59.90%), Postives = 133/192 (69.27%), Query Frame = -1 Query: 2 HFPLSDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS--LSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNW 571 HFPLS+LYE IH FK ++++ IT+ S FTQG TSG L++M QS ILVPALQ QWLMMHVSMMVLGY LVITFRK +R+F K+K F + SF F EIQY NE NV L++ +S++NYYR Q+IQQLDRWS RIISLGFIFLT GILSGAVWANEAWGSYWNW Sbjct: 65 HFPLSNLYESLLFLSWSFAIIHMFPYFKKQKSYVRTITSSSTIFTQGLVTSGLLSEMQQSEILVPALQSQWLMMHVSMMVLGYAALLCGSLLSVALLVITFRKALRIFSKKKAF--LKDSFSFVEIQYRNEPSNVLLSTSFISSKNYYRAQLIQQLDRWSSRIISLGFIFLTIGILSGAVWANEAWGSYWNW 254
BLAST of CV712481 vs. ExPASy Swiss-Prot
Match: CCSA_OLIPU (Cytochrome c biogenesis protein ccsA OS=Olimarabidopsis pumila GN=ccsA PE=3 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 5.819e-56 Identity = 119/197 (60.41%), Postives = 133/197 (67.51%), Query Frame = -1 Query: 2 HFPLSDLYEXXXXXXXXXXXIHKIFDF-KNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKR--KNFVHVNGSFCFSEIQYMNEKKNVFL----NSLSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNW 571 HFPLS+LYE IH + F K QNHL+AITAPSA F QGFATSG L KM QS ILVPALQ QWLMMHVSMM+LGY LVITFRKV F K+ K V +N F F + Y+NE+ ++ L N +RNYYRYQ+IQQLD WS+RIISLGFIFLT GILSGAVWANE WGSYWNW Sbjct: 67 HFPLSNLYESLIFLSWAFSIIHMVSYFNKKQQNHLNAITAPSAIFIQGFATSGLLNKMPQSAILVPALQSQWLMMHVSMMILGYGALLCGSLLSIALLVITFRKVGPTFWKKNIKKNVLLNELFSFDVLYYINERNSILLQQNINFSFSRNYYRYQLIQQLDYWSFRIISLGFIFLTVGILSGAVWANETWGSYWNW 263
BLAST of CV712481 vs. ExPASy Swiss-Prot
Match: CCSA_OENGL (Cytochrome c biogenesis protein ccsA OS=Oenothera glazioviana GN=ccsA PE=3 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 5.819e-56 Identity = 115/192 (59.90%), Postives = 132/192 (68.75%), Query Frame = -1 Query: 2 HFPLSDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS--LSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNW 571 HFPLS+LYE IH FK +++ IT+ S FTQG TSG L++M QS ILVPALQ QWLMMHVSMMVLGY LVITFRK +R+F K+K F + SF F EIQY NE NV L++ +S++NYYR Q+IQQLDRWS RIISLGFIFLT GILSGAVWANEAWGSYWNW Sbjct: 65 HFPLSNLYESLLFLSWSFAIIHMFPYFKKQNSYVRTITSSSTIFTQGLVTSGLLSEMQQSEILVPALQSQWLMMHVSMMVLGYAALLCGSLLSVALLVITFRKALRIFSKKKAF--LKDSFSFVEIQYRNEPSNVLLSTSFISSKNYYRAQLIQQLDRWSSRIISLGFIFLTIGILSGAVWANEAWGSYWNW 254
BLAST of CV712481 vs. ExPASy Swiss-Prot
Match: CCSA_DAUCA (Cytochrome c biogenesis protein ccsA OS=Daucus carota GN=ccsA PE=3 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 9.925e-56 Identity = 114/193 (59.07%), Postives = 131/193 (67.88%), Query Frame = -1 Query: 2 HFPLSDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKN-FVHVNGSFCFSEIQYMNEKKNVFLNS--LSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNW 571 H PLSDLYE IH + FK N++HLS ITA S FTQGFATSG LT++HQS ILVPALQ +WL+MHVSMM+LGY LV+TFRK L K+ + + F F EIQY+NE N+F N+ S NYYR Q+IQQLD WSYR+ISLGFIFLT GILSGAVWANEAWGSYWNW Sbjct: 65 HLPLSDLYESLIFLSWSLSFIHIVPYFKKNKSHLSTITASSVIFTQGFATSGLLTEIHQSAILVPALQSEWLIMHVSMMILGYAALLCGSLLSVALLVLTFRKNRNLLCKKNPLLLKLTEEFSFGEIQYINEINNIFGNASFFSDNNYYRSQLIQQLDYWSYRVISLGFIFLTIGILSGAVWANEAWGSYWNW 257
BLAST of CV712481 vs. ExPASy Swiss-Prot
Match: CCSA_DRIGR (Cytochrome c biogenesis protein ccsA OS=Drimys granadensis GN=ccsA PE=3 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 1.296e-55 Identity = 115/192 (59.90%), Postives = 135/192 (70.31%), Query Frame = -1 Query: 2 HFPLSDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSL--SARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNW 571 HFPLSDLYE IH + N++N LSAIT PSA FTQGFATS LT+MHQS ILVPALQ QWLMMHVSMM+L Y LVITFRK + +K N++ + G+F F EIQY+NEK++V N+ S RNY+RY++ Q+LD WSYR+ISLGFIF T GILSGAVWANEAWGSYWNW Sbjct: 65 HFPLSDLYESLMFLSWSFSIIHMVPKAGNHKNDLSAITGPSAIFTQGFATSDLLTEMHQSAILVPALQSQWLMMHVSMMLLSYAALLCGALLSVAFLVITFRKNTDIAVK-SNYLLI-GTFSFGEIQYLNEKRSVLQNTSFPSFRNYHRYRLTQRLDHWSYRVISLGFIFSTIGILSGAVWANEAWGSYWNW 254
BLAST of CV712481 vs. ExPASy Swiss-Prot
Match: CCSA_SOYBN (Cytochrome c biogenesis protein ccsA OS=Glycine max GN=ccsA PE=3 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 1.693e-55 Identity = 113/195 (57.95%), Postives = 133/195 (68.21%), Query Frame = -1 Query: 2 HFPLSDLYEXXXXXXXXXXXIHKIFDFKNNQNH-LSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMN--EKKNVFLNS--LSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNW 571 H P SDLYE + + FK ++N+ L+ I PS FTQGFATSG LTKMH+S ILVPALQ WLMMHVSMM+LGY LVITF+++I++ K KNF +N SF F+EI+YMN +K NV + LS RNYYR Q +QQLDRW YR ISLGFIFLT GI+SGAVWANEAWGSYWNW Sbjct: 66 HLPFSDLYESLIFLSWTFSIFYMVPYFKKSKNYYLNTIITPSVIFTQGFATSGLLTKMHESLILVPALQSHWLMMHVSMMILGYATLLCGSLLSVAILVITFQELIQIIGKSKNFYFLNESFSFAEIKYMNMTDKNNVLQKTSFLSYRNYYRSQFLQQLDRWGYRTISLGFIFLTIGIISGAVWANEAWGSYWNW 260
BLAST of CV712481 vs. ExPASy Swiss-Prot
Match: CCSA_CALFG (Cytochrome c biogenesis protein ccsA OS=Calycanthus floridus var. glaucus GN=ccsA PE=3 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 1.693e-55 Identity = 117/194 (60.31%), Postives = 134/194 (69.07%), Query Frame = -1 Query: 2 HFPLSDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFL----NSLSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNW 571 HFPLSDLYE IH + F+N++N LSAITAPSA FTQGFATSG LT+MHQS ILVPALQ QWLMMHVSMM+LGY LVITFRK + + K +F + GSF F EI+Y NEK+ + + S RNY+RYQ+ Q+LD SYRIISLGF F T GILSGAVWANEAWGSYWNW Sbjct: 65 HFPLSDLYESLMFLSWSFSIIHMVPYFRNHKNSLSAITAPSAIFTQGFATSGLLTEMHQSAILVPALQSQWLMMHVSMMLLGYASLLCGSLLSVALLVITFRKTLGIPGKNNHF--LIGSFPFGEIRYFNEKRKRSVLKKTSFFSFRNYHRYQLTQRLDHCSYRIISLGFTFSTIGILSGAVWANEAWGSYWNW 256
BLAST of CV712481 vs. ExPASy Swiss-Prot
Match: CCSA_CAPBU (Cytochrome c biogenesis protein ccsA OS=Capsella bursa-pastoris GN=ccsA PE=3 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 2.211e-55 Identity = 119/198 (60.10%), Postives = 134/198 (67.68%), Query Frame = -1 Query: 2 HFPLSDLYEXXXXXXXXXXXIHKIFDF-KNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLK---RKNFVHVNGSFCFSEIQYMNEKKNVFL----NSLSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNW 571 HFPLS+LYE IH + F K QNHL+AITAPSA F QGFATSG L KM QS ILVPALQ QWLMMHVSMM+LGY LVITFRKV F K +K F+ +N F F + Y+NE+ ++ L N +RNYYRYQ+IQQLD WS+RIISLGFIFLT GILSGAVWANE WGSYWNW Sbjct: 67 HFPLSNLYESLIFLSWSFSIIHMVSYFNKKQQNHLNAITAPSAIFIQGFATSGLLNKMPQSAILVPALQSQWLMMHVSMMILGYGALLCGSLLSIALLVITFRKVGPTFWKKNIKKKFL-LNELFSFDVLYYINERNSILLQQNINFSFSRNYYRYQLIQQLDFWSFRIISLGFIFLTVGILSGAVWANETWGSYWNW 263 The following BLAST results are available for this feature:
BLAST of CV712481 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 132
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712481 ID=CV712481; Name=CV712481; organism=Citrus sinensis; type=EST; length=571bpback to top |