CV712481
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712481 vs. ExPASy Swiss-Prot
Match: CCSA_HELAN (Cytochrome c biogenesis protein ccsA OS=Helianthus annuus GN=ccsA PE=3 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 5.097e-52 Identity = 107/192 (55.73%), Postives = 126/192 (65.62%), Query Frame = -1 Query: 2 HFPLSDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS--LSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNW 571 HFPLSDLYE IH + FK +N L+ ITA FTQGFATSG L ++H+ ILVPALQ +WL+MHVSMM+L Y LVITFR + K N + +N SF F EIQY NE+ N+F + S +NYY+ Q IQQLD WSYR+ISLGFIFLT GILSGAVWANEAWGSYW+W Sbjct: 65 HFPLSDLYESLIFLSWSFSLIHIVPYFKIRKNDLTTITASITIFTQGFATSGLLNEIHKPTILVPALQSEWLIMHVSMMILSYAALLCGSLLSVALLVITFRNIF-YSSKSNNLLKLNESFSFGEIQYKNERNNIFQKTSFFSDKNYYKAQFIQQLDYWSYRVISLGFIFLTIGILSGAVWANEAWGSYWSW 255
BLAST of CV712481 vs. ExPASy Swiss-Prot
Match: CCSA_AMBTC (Cytochrome c biogenesis protein ccsA OS=Amborella trichopoda GN=ccsA PE=3 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 5.097e-52 Identity = 107/191 (56.02%), Postives = 128/191 (67.02%), Query Frame = -1 Query: 2 HFPLSDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLN-SLSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNW 571 H PLS+LYE IH I +N++N LS+ITAPSA TQGF TSG LT+MHQS ILVPALQ WL+MHVSMM+L Y LVITFRK + + F+ + F F EIQY+NEK+++ N S S RNY++YQ+ QQLD WSYR+I +GF LT GILSGAVWANEAWGSYWNW Sbjct: 64 HLPLSNLYESLIFLSWGFSLIHMISKIQNHKNFLSSITAPSAILTQGFVTSGLLTEMHQSAILVPALQSHWLIMHVSMMLLSYAALLCGSLLSIALLVITFRKKLDII-----FLLIR-LFSFGEIQYLNEKRSILQNTSFSFRNYHKYQLTQQLDHWSYRVIGIGFTLLTLGILSGAVWANEAWGSYWNW 248
BLAST of CV712481 vs. ExPASy Swiss-Prot
Match: CCSA_TOBAC (Cytochrome c biogenesis protein ccsA OS=Nicotiana tabacum GN=ccsA PE=3 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 8.695e-52 Identity = 115/192 (59.90%), Postives = 126/192 (65.62%), Query Frame = -1 Query: 2 HFPLSDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS--LSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNW 571 HFPLSDLYE IH I FK N LS IT PSA FTQGFATSG LT++HQS ILVPALQ +WL+MHVSMM+LGY LVITFRK +LF K F +N SF E NV N+ SA+NYYR Q+IQQLD WSYR+ISLGF FLT GILSGAVWANEAWGSYWNW Sbjct: 65 HFPLSDLYESLIFLSWSFSLIHIIPYFKKNVLILSKITGPSAIFTQGFATSGILTEIHQSVILVPALQSEWLIMHVSMMILGYAALLCGSLLSVALLVITFRKNRQLFYKSNGF--LNESFFLGE--------NVLQNTSFFSAKNYYRSQLIQQLDYWSYRVISLGFTFLTIGILSGAVWANEAWGSYWNW 246
BLAST of CV712481 vs. ExPASy Swiss-Prot
Match: CCSA_PHAVU (Cytochrome c biogenesis protein ccsA OS=Phaseolus vulgaris GN=ccsA PE=3 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 8.695e-52 Identity = 107/198 (54.04%), Postives = 127/198 (64.14%), Query Frame = -1 Query: 2 HFPLSDLYEXXXXXXXXXXXIHKIFDFKNNQNH-LSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQY--MNEKKNV-----FLNSLSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNW 571 H P S+LYE + + K +N+ + I PS FTQGFATSG LT+MHQS ILVPALQ WLMMHVSMM+LGY LVITF+++I + K K F N + F+EI+Y MN+KKN+ F++ S NYYRYQ IQQLDRW YR ISLGFIFLT G +SGAVWANEAWGSYWNW Sbjct: 66 HLPFSNLYESLIFLSWTFSIFYMVLCLKKKKNYYFNTIITPSILFTQGFATSGLLTEMHQSLILVPALQSHWLMMHVSMMILGYTTLLCGSLLSVAILVITFQELIHMIGKSKTFFFFNETLSFAEIKYMNMNDKKNLLQKTPFMSDSSYINYYRYQFIQQLDRWGYRTISLGFIFLTVGNISGAVWANEAWGSYWNW 263
BLAST of CV712481 vs. ExPASy Swiss-Prot
Match: CCSA_NICSY (Cytochrome c biogenesis protein ccsA OS=Nicotiana sylvestris GN=ccsA PE=3 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 8.695e-52 Identity = 115/192 (59.90%), Postives = 126/192 (65.62%), Query Frame = -1 Query: 2 HFPLSDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS--LSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNW 571 HFPLSDLYE IH I FK N LS IT PSA FTQGFATSG LT++HQS ILVPALQ +WL+MHVSMM+LGY LVITFRK +LF K F +N SF E NV N+ SA+NYYR Q+IQQLD WSYR+ISLGF FLT GILSGAVWANEAWGSYWNW Sbjct: 65 HFPLSDLYESLIFLSWSFSLIHIIPYFKKNVLILSKITGPSAIFTQGFATSGILTEIHQSVILVPALQSEWLIMHVSMMILGYAALLCGSLLSVALLVITFRKNRQLFYKSNGF--LNESFFLGE--------NVLQNTSFFSAKNYYRSQLIQQLDYWSYRVISLGFTFLTIGILSGAVWANEAWGSYWNW 246
BLAST of CV712481 vs. ExPASy Swiss-Prot
Match: CCSA_NUPAD (Cytochrome c biogenesis protein ccsA OS=Nuphar advena GN=ccsA PE=3 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 3.304e-51 Identity = 108/190 (56.84%), Postives = 124/190 (65.26%), Query Frame = -1 Query: 2 HFPLSDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSLSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNW 571 H PLSDLYE IH + F+N +N+ S ITAPSA TQGFATSG LTKMHQS ILVPALQ +WLMMHVSMM+L Y LVITFR+ I + K + + SF F EIQY+N +S RNY+RYQ+ Q+LD WSYR+I LGF LT GILSGAVWANEAWGSYWNW Sbjct: 64 HVPLSDLYESLMFLSWSFSFIHIVPYFRNYKNYFSTITAPSAILTQGFATSGLLTKMHQSAILVPALQSRWLMMHVSMMLLSYAALLCGSLLSITLLVITFRRNIDIIGKTNHL--LISSFSFDEIQYLN---------VSFRNYHRYQLTQRLDHWSYRVIGLGFTLLTIGILSGAVWANEAWGSYWNW 242
BLAST of CV712481 vs. ExPASy Swiss-Prot
Match: CCSA_NICTO (Cytochrome c biogenesis protein ccsA OS=Nicotiana tomentosiformis GN=ccsA PE=3 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 3.304e-51 Identity = 113/190 (59.47%), Postives = 125/190 (65.79%), Query Frame = -1 Query: 2 HFPLSDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSLSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNW 571 HFPLSDLYE IH I FK N LS I PSA FTQGFATSG LT++HQS ILVPALQ +WL+MHVSMM+LGY LVITFRK +LF K F +N SF E N +N + SA+NYYR Q+IQQLD WSYR+ISLGF FLT GILSGAVWANEAWGSYWNW Sbjct: 65 HFPLSDLYESLIFLSWSFSLIHIIPYFKKNVLILSKIIGPSAIFTQGFATSGILTEIHQSVILVPALQSEWLIMHVSMMILGYAALLCGSLLSVALLVITFRKNRQLFYKSNGF--LNESFFLGE----NVLQNTYF--FSAKNYYRSQLIQQLDYWSYRVISLGFTFLTIGILSGAVWANEAWGSYWNW 246
BLAST of CV712481 vs. ExPASy Swiss-Prot
Match: CCSA_SOLTU (Cytochrome c biogenesis protein ccsA OS=Solanum tuberosum GN=ccsA PE=3 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 1.640e-50 Identity = 113/192 (58.85%), Postives = 124/192 (64.58%), Query Frame = -1 Query: 2 HFPLSDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS--LSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNW 571 HFPLSDLYE IH I FK N LS IT PSA TQGFATSG LT++HQS ILVPALQ +WL+MHVSMM+LGY LVITFRK +LF K F +N SF E NV N+ A+NYYR Q+IQQLD WSYR+ISLGF FLT GILSGAVWANEAWGSYWNW Sbjct: 65 HFPLSDLYESLIFLSWSFSLIHIIPYFKKNVLILSKITGPSAILTQGFATSGILTEIHQSGILVPALQSEWLIMHVSMMILGYAALLCGSLLSVALLVITFRKNRKLFYKSNGF--LNESFFLGE--------NVVENTSFFCAKNYYRSQLIQQLDYWSYRVISLGFTFLTIGILSGAVWANEAWGSYWNW 246
BLAST of CV712481 vs. ExPASy Swiss-Prot
Match: CCSA_SOLBU (Cytochrome c biogenesis protein ccsA OS=Solanum bulbocastanum GN=ccsA PE=3 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 1.640e-50 Identity = 113/192 (58.85%), Postives = 124/192 (64.58%), Query Frame = -1 Query: 2 HFPLSDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNS--LSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNW 571 HFPLSDLYE IH I FK N LS IT PSA TQGFATSG LT++HQS ILVPALQ +WL+MHVSMM+LGY LVITFRK +LF K F +N SF E NV N+ A+NYYR Q+IQQLD WSYR+ISLGF FLT GILSGAVWANEAWGSYWNW Sbjct: 65 HFPLSDLYESLIFLSWSFSLIHIIPYFKKNVLILSKITGPSAILTQGFATSGILTEIHQSGILVPALQSEWLIMHVSMMILGYAALLCGSLLSVALLVITFRKNRKLFYKSNGF--LNESFFLGE--------NVVENTSFFCAKNYYRSQLIQQLDYWSYRVISLGFTFLTIGILSGAVWANEAWGSYWNW 246
BLAST of CV712481 vs. ExPASy Swiss-Prot
Match: CCSA_NYMAL (Cytochrome c biogenesis protein ccsA OS=Nymphaea alba GN=ccsA PE=3 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 1.640e-50 Identity = 108/190 (56.84%), Postives = 122/190 (64.21%), Query Frame = -1 Query: 2 HFPLSDLYEXXXXXXXXXXXIHKIFDFKNNQNHLSAITAPSAFFTQGFATSGFLTKMHQSRILVPALQVQWLMMHVSMMVLGYXXXXXXXXXXXXXLVITFRKVIRLFLKRKNFVHVNGSFCFSEIQYMNEKKNVFLNSLSARNYYRYQVIQQLDRWSYRIISLGFIFLTTGILSGAVWANEAWGSYWNW 571 H PLSDLYE IH + F+N +N S ITAPSA TQGFATSG LTKMHQS ILVPALQ +WLMMHVSMM+L Y LVITFR+ I +F K + + SF F E QY+N S RNY+RYQ+ Q+LD WSYR+I LGF LT GILSGAVWANEAWGSYWNW Sbjct: 64 HVPLSDLYESLMFLSWSFSLIHIVPYFRNYKNFFSKITAPSAILTQGFATSGLLTKMHQSAILVPALQSRWLMMHVSMMLLSYAALLCGSLLSITLLVITFRRKIDIFGKTNHL--LISSFSFDETQYVN---------FSFRNYHRYQLTQRLDYWSYRVIGLGFTLLTIGILSGAVWANEAWGSYWNW 242 The following BLAST results are available for this feature:
BLAST of CV712481 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 132
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712481 ID=CV712481; Name=CV712481; organism=Citrus sinensis; type=EST; length=571bpback to top |