CV712448
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712448 vs. ExPASy Swiss-Prot
Match: NU6C_AETCO (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Aethionema cordifolium GN=ndhG PE=3 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 7.198e-60 Identity = 116/155 (74.84%), Postives = 127/155 (81.94%), Query Frame = -1 Query: 334 GPIHDFXXXXXXXXXXXXXXXXXLFTNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAVNVLIIFAVMFMNGSDYSKDFQLNLWTIGDGLTSLVCTSIFFSLITTILDTSWYGIIWTTRANQIIEQDLISNSQQIGIHLSTDFFLPFE 798 GPIHDF LF NPI+SAFSLG VLVCISL YILSNSHFVAAAQLLIYVGA+ VLIIFAVMFMN S+YS D LN WT+GDG+TS++CT+I FSLI+TILDTSWYG+IWTTR NQI+EQDLISNSQQIGIHLSTDFFLPFE Sbjct: 5 GPIHDFLLVFLGSGLLFGSLGVVLFPNPIFSAFSLGFVLVCISLLYILSNSHFVAAAQLLIYVGAITVLIIFAVMFMNDSEYSTD--LNRWTVGDGITSVICTTILFSLISTILDTSWYGVIWTTRLNQILEQDLISNSQQIGIHLSTDFFLPFE 157
BLAST of CV712448 vs. ExPASy Swiss-Prot
Match: NU6C_SOLLC (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Solanum lycopersicum GN=ndhG PE=3 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 1.228e-59 Identity = 116/154 (75.32%), Postives = 127/154 (82.47%), Query Frame = -1 Query: 334 PIHDFXXXXXXXXXXXXXXXXXLFTNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAVNVLIIFAVMFMNGSDYSKDFQLNLWTIGDGLTSLVCTSIFFSLITTILDTSWYGIIWTTRANQIIEQDLISNSQQIGIHLSTDFFLPFE 795 PIHDF L NPIYSAFSLGLVLVC SLFYILSN++FVAAAQLLIYVGA+NVLIIFAVMFMNGS+Y KDF +LWT+GDG+TS+VC S+F SLITTI DTSWYGIIWTTR+NQIIEQD +SNSQQIGIHLSTDFFLPFE Sbjct: 6 PIHDFLLVFLGSGLILGGLGVVLLPNPIYSAFSLGLVLVCTSLFYILSNAYFVAAAQLLIYVGAINVLIIFAVMFMNGSEYYKDF--HLWTVGDGITSMVCISLFISLITTISDTSWYGIIWTTRSNQIIEQDFLSNSQQIGIHLSTDFFLPFE 157
BLAST of CV712448 vs. ExPASy Swiss-Prot
Match: NU6C_OLIPU (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Olimarabidopsis pumila GN=ndhG PE=3 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 1.228e-59 Identity = 116/155 (74.84%), Postives = 127/155 (81.94%), Query Frame = -1 Query: 334 GPIHDFXXXXXXXXXXXXXXXXXLFTNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAVNVLIIFAVMFMNGSDYSKDFQLNLWTIGDGLTSLVCTSIFFSLITTILDTSWYGIIWTTRANQIIEQDLISNSQQIGIHLSTDFFLPFE 798 GPIHDF L NPI+SAFSLG VLVCISL YILSNSHFVAAAQLLIYVGA+NVLIIFAVMFMN S+YS DF NLWT+G+G+TSLVCT+I F L++TILDTSWYG+IWTTR NQI+EQDLISNSQQIGIHLSTDFFLPFE Sbjct: 5 GPIHDFLLVFLGSGLLVGGLGVVLLPNPIFSAFSLGFVLVCISLLYILSNSHFVAAAQLLIYVGAINVLIIFAVMFMNDSEYSTDF--NLWTVGNGITSLVCTTILFLLMSTILDTSWYGVIWTTRLNQILEQDLISNSQQIGIHLSTDFFLPFE 157
BLAST of CV712448 vs. ExPASy Swiss-Prot
Match: NU6C_PIPCE (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Piper cenocladum GN=ndhG PE=3 SV=1) HSP 1 Score: 229.565 bits (584), Expect = 1.604e-59 Identity = 117/155 (75.48%), Postives = 127/155 (81.94%), Query Frame = -1 Query: 334 GPIHDFXXXXXXXXXXXXXXXXXLFTNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAVNVLIIFAVMFMNGSDYSKDFQLNLWTIGDGLTSLVCTSIFFSLITTILDTSWYGIIWTTRANQIIEQDLISNSQQIGIHLSTDFFLPFE 798 GPIHD L TN IYSAFSLG VLVCISLFYILSNS+FVAAAQLLIYVGA+NVLIIFAVMFM GS+YS DF ++WT+GDG+TSLVCTSIFFSLITTILDTSWYGIIWTTR+NQI+EQDL+SN QQIGIHL TDF LPFE Sbjct: 5 GPIHDILLVFLGSGIVLGSLGVILLTNTIYSAFSLGFVLVCISLFYILSNSYFVAAAQLLIYVGAINVLIIFAVMFMKGSEYSNDF--SIWTVGDGVTSLVCTSIFFSLITTILDTSWYGIIWTTRSNQIMEQDLLSNVQQIGIHLVTDFILPFE 157
BLAST of CV712448 vs. ExPASy Swiss-Prot
Match: NU6C_SOLBU (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Solanum bulbocastanum GN=ndhG PE=3 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 2.094e-59 Identity = 116/154 (75.32%), Postives = 127/154 (82.47%), Query Frame = -1 Query: 334 PIHDFXXXXXXXXXXXXXXXXXLFTNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAVNVLIIFAVMFMNGSDYSKDFQLNLWTIGDGLTSLVCTSIFFSLITTILDTSWYGIIWTTRANQIIEQDLISNSQQIGIHLSTDFFLPFE 795 PIHDF L NPIYSAFSLGLVLVC SLFYILSNS+FVAAAQLLIYVGA+NVLIIFAVMFMNGS+Y KDF +LWT+G+G+TS+VC S+F SLITTI DTSWYGIIWTTR+NQIIEQD +SNSQQIGIHLSTDFFLPFE Sbjct: 6 PIHDFLLVFLGSGLILGGLGVVLLPNPIYSAFSLGLVLVCTSLFYILSNSYFVAAAQLLIYVGAINVLIIFAVMFMNGSEYYKDF--HLWTVGNGITSMVCISLFISLITTISDTSWYGIIWTTRSNQIIEQDFLSNSQQIGIHLSTDFFLPFE 157
BLAST of CV712448 vs. ExPASy Swiss-Prot
Match: NU6C_NASOF (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Nasturtium officinale GN=ndhG PE=3 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 2.094e-59 Identity = 116/155 (74.84%), Postives = 127/155 (81.94%), Query Frame = -1 Query: 334 GPIHDFXXXXXXXXXXXXXXXXXLFTNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAVNVLIIFAVMFMNGSDYSKDFQLNLWTIGDGLTSLVCTSIFFSLITTILDTSWYGIIWTTRANQIIEQDLISNSQQIGIHLSTDFFLPFE 798 GPIHDF L NPI+SAFSLG VLVCISL YILSNSHFVAAAQLLIYVGA+NVLIIFAVMFMN S+YS D NLWT+G+G+TSLVCT+I FSL++TILDTSWYG+IWTTR NQI+EQDLISNSQQIGIHLSTDFFLPFE Sbjct: 5 GPIHDFLLVFLGSGLLVGGLGVVLLPNPIFSAFSLGFVLVCISLLYILSNSHFVAAAQLLIYVGAINVLIIFAVMFMNDSEYSTDS--NLWTVGNGITSLVCTTILFSLMSTILDTSWYGVIWTTRLNQILEQDLISNSQQIGIHLSTDFFLPFE 157
BLAST of CV712448 vs. ExPASy Swiss-Prot
Match: NU6C_NANDO (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Nandina domestica GN=ndhG PE=3 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 2.094e-59 Identity = 116/154 (75.32%), Postives = 127/154 (82.47%), Query Frame = -1 Query: 334 PIHDFXXXXXXXXXXXXXXXXXLFTNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAVNVLIIFAVMFMNGSDYSKDFQLNLWTIGDGLTSLVCTSIFFSLITTILDTSWYGIIWTTRANQIIEQDLISNSQQIGIHLSTDFFLPFE 795 PIHDF L TNPIYSAFSLGLVLVCISLF+I +NSHFVAAAQLLIYVGA+NVLI+FAVMFMNGS+Y DF +LWT+GDG+TSLVCTSIF SLITTI DTSWYGIIWTTR+NQIIEQDLI+ QQ+GIHLSTDFFLPFE Sbjct: 6 PIHDFLLVFLGLGLIVGGLGVVLLTNPIYSAFSLGLVLVCISLFHIPANSHFVAAAQLLIYVGAINVLIVFAVMFMNGSEYYNDF--HLWTVGDGVTSLVCTSIFVSLITTISDTSWYGIIWTTRSNQIIEQDLINKGQQLGIHLSTDFFLPFE 157
BLAST of CV712448 vs. ExPASy Swiss-Prot
Match: NU6C_JASNU (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Jasminum nudiflorum GN=ndhG PE=3 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 2.094e-59 Identity = 116/155 (74.84%), Postives = 126/155 (81.29%), Query Frame = -1 Query: 334 GPIHDFXXXXXXXXXXXXXXXXXLFTNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAVNVLIIFAVMFMNGSDYSKDFQLNLWTIGDGLTSLVCTSIFFSLITTILDTSWYGIIWTTRANQIIEQDLISNSQQIGIHLSTDFFLPFE 798 GPIHDF NPIYSAFSLGLVL CISLFYIL NS+FVAAAQLLIYVGA+NVLIIFAVMFMNGS+Y KDF L WT+GDG+TS+VCTS+F SLITTI DTSWYGIIWTT++NQIIE+DLISNSQQIGIHL TDFFLPFE Sbjct: 5 GPIHDFLLVFLELGLILGSLGVVFLPNPIYSAFSLGLVLFCISLFYILLNSYFVAAAQLLIYVGAINVLIIFAVMFMNGSEYYKDFYL--WTVGDGVTSMVCTSLFISLITTIPDTSWYGIIWTTKSNQIIEKDLISNSQQIGIHLVTDFFLPFE 157
BLAST of CV712448 vs. ExPASy Swiss-Prot
Match: NU6C_ARATH (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Arabidopsis thaliana GN=ndhG PE=3 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 2.094e-59 Identity = 116/155 (74.84%), Postives = 127/155 (81.94%), Query Frame = -1 Query: 334 GPIHDFXXXXXXXXXXXXXXXXXLFTNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAVNVLIIFAVMFMNGSDYSKDFQLNLWTIGDGLTSLVCTSIFFSLITTILDTSWYGIIWTTRANQIIEQDLISNSQQIGIHLSTDFFLPFE 798 GPIHDF L NPI+SAFSLG VLVCISL YILSNSHFVAAAQLLIYVGA+NVLIIFAVMFMN S+YS DF NLWTIG+G+TSLVCT+I F L++TILDTSWYG+IWTT+ NQI+EQDLISNSQQIGIHLSTDFFLPFE Sbjct: 5 GPIHDFLLVFLGSGLLVGGLGVVLLPNPIFSAFSLGFVLVCISLLYILSNSHFVAAAQLLIYVGAINVLIIFAVMFMNDSEYSTDF--NLWTIGNGITSLVCTTILFLLMSTILDTSWYGVIWTTKLNQILEQDLISNSQQIGIHLSTDFFLPFE 157
BLAST of CV712448 vs. ExPASy Swiss-Prot
Match: NU6C_PELHO (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Pelargonium hortorum GN=ndhG PE=3 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 2.735e-59 Identity = 114/155 (73.55%), Postives = 128/155 (82.58%), Query Frame = -1 Query: 334 GPIHDFXXXXXXXXXXXXXXXXXLFTNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAVNVLIIFAVMFMNGSDYSKDFQLNLWTIGDGLTSLVCTSIFFSLITTILDTSWYGIIWTTRANQIIEQDLISNSQQIGIHLSTDFFLPFE 798 GPIHDF L TNPIYSAFSLG V +CISLFYILSNS+FVAAAQLLIYVGA+NVLI+FAVMFMNGS+Y KDF +LWT+GDGLTSL+CT +F SLITTILDTSWYGI+WTT++NQIIE+D ISNSQQ+GI LSTDFFLPFE Sbjct: 5 GPIHDFLLVFLGSGIILGGLGVVLLTNPIYSAFSLGFVFICISLFYILSNSYFVAAAQLLIYVGAINVLILFAVMFMNGSEYYKDF--HLWTLGDGLTSLICTILFLSLITTILDTSWYGILWTTKSNQIIEKDFISNSQQLGILLSTDFFLPFE 157 The following BLAST results are available for this feature:
BLAST of CV712448 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 102
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712448 ID=CV712448; Name=CV712448; organism=Citrus sinensis; type=EST; length=798bpback to top |