CV712335

Overview
NameCV712335
Unique NameCV712335
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length759
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712335 vs. ExPASy Swiss-Prot
Match: TCTP_ASPFU (Translationally-controlled tumor protein homolog OS=Aspergillus fumigatus GN=AFUA_1G16840 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.956e-12
Identity = 53/179 (29.61%), Postives = 87/179 (48.60%), Query Frame = 1
Query:   97 MLVYQDLLTGDELLSDSFPYKETENGILWEVE-GKWVVQGAVDVDI-GANPSXXXXXXXXXXXXXXXKVVDIVDTFRL-----QEQPAFDKKQFVTYMKRFIKLLTPKLSEE-----RQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVK 597
            M++Y+D+++GDE+LSD+F  KE + G+L+E +  K++ +   D+ + GANPS                V DI D FRL     +E     K  F +++K ++K +  KL E+       + FKK    A K +L+   +    +G SM  D   V   ++E    P        L+E+K
Sbjct:    1 MIIYKDIISGDEVLSDNFKIKEVD-GVLYECDCRKYLKRKNEDIQLEGANPSAEEGDDDAGGDGEEVMVHDIEDQFRLVWLKTEEGMKPSKDAFKSHLKTYMKKVLAKLQEKGVPEAEIDAFKKGAPAAVKKILANYDNYDVLMGHSMDGDAMHVLIDFREDGVTPYATLWKHGLEEMK 178          
BLAST of CV712335 vs. ExPASy Swiss-Prot
Match: TCTP_EMENI (Translationally-controlled tumor protein homolog OS=Emericella nidulans GN=AN0641 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.712e-11
Identity = 54/179 (30.17%), Postives = 83/179 (46.37%), Query Frame = 1
Query:   97 MLVYQDLLTGDELLSDSFPYKETENGILWEVE-GKWVVQGAVDVDI-GANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFD---------KKQFVTYMKRFIKLLTPK-LSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALKEVK 597
            M++Y+D+++GDE+LSD++  K T +G+L+E +  K++ +   D ++ GANPS                V DI D FRL    A D         K    TYMK+ +K L  K   +E    FKK    A   +L    +    +GESM  D   +   ++E    P        L+E+K
Sbjct:    1 MIIYKDIISGDEVLSDTYNIK-TVDGVLYECDCRKYLKKTNEDFELEGANPSAEGGDDEGGAEGGEVMVHDIEDQFRLVWLKAEDGAKPPKDAFKGHLKTYMKKVLKALQDKGAPDETINEFKKGAPAAVNKILKNYDNYDVLMGESMDGDAMHILIDFREDGVTPYATLWKHGLEEMK 178          
The following BLAST results are available for this feature:
BLAST of CV712335 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
TCTP_ASPFU3.956e-1229.61Translationally-controlled tumor protein homolog O... [more]
TCTP_EMENI5.712e-1130.17Translationally-controlled tumor protein homolog O... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001D23_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001D23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712335 ID=CV712335; Name=CV712335; organism=Citrus sinensis; type=EST; length=759bp
GCTCTCGCTCTCTCACCGCTGCGTCTCTCTCTCTCTCTCTCCAGTTTTCT
CCGTTGATTATTTTTCTTTTTTGTGTTCGCGAGAGAGACTGCAATCATGT
TGGTCTATCAAGATCTCCTCACCGGTGATGAGCTTCTCTCCGACTCTTTT
CCCTACAAGGAAACTGAGAATGGGATTCTGTGGGAAGTTGAGGGAAAGTG
GGTTGTACAAGGAGCCGTTGATGTTGACATTGGTGCAAATCCTTCTGCCG
AAGGAGCTGATGAGGATGAGGGTGTTGATGACCAAGCCGTGAAGGTGGTC
GACATTGTCGACACATTCAGGCTGCAGGAGCAACCTGCTTTTGACAAGAA
GCAGTTTGTAACATACATGAAGAGATTCATCAAGTTGCTGACGCCCAAGC
TGAGTGAGGAGAGGCAGGAGATATTTAAGAAGAATATTGAGGGAGCGACC
AAGTTCTTGCTCTCGAAGCTCAGTGACCTTCAATTCTTTGTTGGGGAGAG
CATGCATGATGATGGCTGTCTTGTCTTTGCTTACTACAAGGAAGGTGCGA
CCGACCCAACATTTTTGTATATTGCTGATGCATTGAAGGAGGTGAAGTGC
TAAGCCGGGCTTCGAAGAGGAAGTGCCTGCTGTAGTTCTAGTTTTAATTA
TTGCCCGCGGTTATTTTTATGTATCTTTTGTACTGGTTTACTCGGGACTT
GTGCTTGCTGTTTTTTAGTTTTTATTTTGACATAAACAATATGTTTTTCT
GCTCCTAAT
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