CV712293

Overview
NameCV712293
Unique NameCV712293
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length844
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712293 vs. ExPASy Swiss-Prot
Match: PURA_ANATD (Adenylosuccinate synthetase OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=purA PE=3 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.286e-54
Identity = 103/207 (49.76%), Postives = 146/207 (70.53%), Query Frame = -3
Query:  186 IEGSDSSM-DIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGTTTGRPRRCGWLDIVALKYCCQINGFSSLNLTKLDVLSELPEIQLGVAYKQVDGTPIKSFPADLVLLEQLKVEYEVLLGW-QSDISSIRNYSDLPKAARQFVERIEELVGVPINYIGVGPGRDALIFK 800
            +EG+ ++M D+D+GTYP+VTSS P+ GG C G GIAP+ + ++IGVVKAYTTRVG GPFPTE+L + G+ +R  G+E+GTTTGRPRRCGWLD+V ++Y   ING   + LTKLD LS LP+I++ V YK  +G  +  FPA L +  + +  YE   GW + +I + + Y  LPK+A++++E IE+  G  +  IG GP R+ +I K
Sbjct:  220 LEGAQATMLDLDYGTYPYVTSSHPTVGGFCIGAGIAPKYIQEVIGVVKAYTTRVGKGPFPTELLDEIGNSIREKGREYGTTTGRPRRCGWLDLVVVRYAVLINGIDKIALTKLDTLSGLPKIKVCVGYK-YEGKVLDLFPASLRVARECEPVYEEFEGWSEEEIKAAKEYEALPKSAKRYIEFIEKETGAKVFLIGTGPAREDIIIK 425          
BLAST of CV712293 vs. ExPASy Swiss-Prot
Match: PURA_GEOUR (Adenylosuccinate synthetase OS=Geobacter uraniireducens (strain Rf4) GN=purA PE=3 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 2.865e-54
Identity = 101/203 (49.75%), Postives = 139/203 (68.47%), Query Frame = -3
Query:  192 EGSDSSM-DIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGTTTGRPRRCGWLDIVALKYCCQINGFSSLNLTKLDVLSELPEIQLGVAYKQVDGTPIKSFPADLVLLEQLKVEYEVLLGWQSDISSIRNYSDLPKAARQFVERIEELVGVPINYIGVGPGRDALI 797
            EG+  ++ D+D GTYP+VTSSS  AGG CTG G +PR + ++IG+ KAY TRVGSGPFPTE+    G+ LR  G EFG TTGRPRRCGW D + +KY  ++NG + + LTKLDVLS+   I++   Y   D   +   PA+L + E+ +  YE + GWQSDI+ +R++ +LP+ A+ +V+R+EEL G PI  + VGP RD  I
Sbjct:  222 EGAQGTLLDVDHGTYPYVTSSSTCAGGACTGTGASPRDINEIIGISKAYVTRVGSGPFPTELEDADGEKLRHTGGEFGATTGRPRRCGWFDALVIKYAVRVNGLTGIALTKLDVLSDFESIKICTGYSYNDKF-LNELPANLDVFEKCRPVYEEMPGWQSDITGVRSFEELPEKAKNYVKRLEELAGCPIVLVSVGPRRDETI 423          
BLAST of CV712293 vs. ExPASy Swiss-Prot
Match: PURA_DESOH (Adenylosuccinate synthetase OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=purA PE=3 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 2.865e-54
Identity = 103/203 (50.74%), Postives = 139/203 (68.47%), Query Frame = -3
Query:  192 EGSDSS-MDIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGTTTGRPRRCGWLDIVALKYCCQINGFSSLNLTKLDVLSELPEIQLGVAYKQVDGTPIKSFPADLVLLEQLKVEYEVLLGWQSDISSIRNYSDLPKAARQFVERIEELVGVPINYIGVGPGRDALI 797
            EG+  + +DID GTYP+VTSS+  AG  C G GI PR +  ++G+VKAYTTRVG GPFPTE+    GD ++  G EFG TTGR RRCGWLD V LK   ++NG + L +TKLDVL+ L  +++  AY+   G  +  FPAD+  L Q +  YE + GWQ DIS +R+ +DLP AAR++++RI ELVGV ++ + VG GRD  +
Sbjct:  221 EGAQGTYLDIDHGTYPYVTSSNTVAGNACCGSGIGPRDLSGVLGIVKAYTTRVGEGPFPTELFDDVGDFMQRTGSEFGATTGRKRRCGWLDAVMLKSAARLNGLTGLAITKLDVLTGLDTLEICTAYR-YQGKTLSDFPADVKTLSQCEPVYEAVQGWQEDISGVRSAADLPDAARRYLDRITELVGVRVDIVSVGAGRDQTV 422          
BLAST of CV712293 vs. ExPASy Swiss-Prot
Match: PURA_GEOLS (Adenylosuccinate synthetase OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=purA PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 4.887e-54
Identity = 100/200 (50.00%), Postives = 139/200 (69.50%), Query Frame = -3
Query:  201 EGSDSSM-DIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGTTTGRPRRCGWLDIVALKYCCQINGFSSLNLTKLDVLSELPEIQLGVAYKQVDGTPIKSFPADLVLLEQLKVEYEVLLGWQSDISSIRNYSDLPKAARQFVERIEELVGVPINYIGVGPGRD 797
            EG+  ++ D+D GTYPFVTSSS  AGG  TG G++PR + +++G+ KAY TRVGSGPFPTE+L + G+ LR  G EFG TTGRPRRCGW D + ++Y  +ING + + LTKLDVLS+   I++   Y+  +G  +++ PA L   E  +  YE L GW+ DI+ +R+Y  LP+ A+++V R+EEL G PI  + VGP RD
Sbjct:  221 EGAQGTLLDVDHGTYPFVTSSSTCAGGAATGTGVSPREIHEVVGISKAYVTRVGSGPFPTELLDETGEKLRQVGGEFGATTGRPRRCGWFDAMVIRYAVRINGLTGIALTKLDVLSDFETIKVCTGYR-FEGQELETLPAKLETFENCEPVYEELPGWKVDITGVRSYDQLPENAKKYVRRLEELAGCPIVMVSVGPRRD 419          
BLAST of CV712293 vs. ExPASy Swiss-Prot
Match: PURA_PELPD (Adenylosuccinate synthetase OS=Pelobacter propionicus (strain DSM 2379) GN=purA PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 6.383e-54
Identity = 102/203 (50.25%), Postives = 138/203 (67.98%), Query Frame = -3
Query:  192 EGSDSSM-DIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGTTTGRPRRCGWLDIVALKYCCQINGFSSLNLTKLDVLSELPEIQLGVAYKQVDGTPIKSFPADLVLLEQLKVEYEVLLGWQSDISSIRNYSDLPKAARQFVERIEELVGVPINYIGVGPGRDALI 797
            EG+  ++ D+DFGTYPFVTSSS  AGG+CTG G+ PR + ++IG+ KAY TRVGSGPFPTE+    GD LR AG EFG+TTGRPRRCGW D + ++Y  + NG + + LTKLDVLS    I++   Y  +DG  +++ P+     E  +  YE L GW +DIS  +++ +LP +AR +V+R+EEL G PI  + VG  RD  I
Sbjct:  222 EGAQGTLLDVDFGTYPFVTSSSTCAGGVCTGSGVGPRHIHEIIGISKAYVTRVGSGPFPTELFDADGDRLRDAGGEFGSTTGRPRRCGWFDAMVIRYAVRTNGLTGIALTKLDVLSGFDSIKICTGY-TLDGKALETLPSAPEAFENCQPVYEELPGWNADISGAKSFEELPDSARAYVKRLEELAGCPIVLVSVGARRDQTI 423          
BLAST of CV712293 vs. ExPASy Swiss-Prot
Match: PURA_BIFLI (Adenylosuccinate synthetase OS=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / NCTC 11817 / S12) GN=purA PE=3 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 8.336e-54
Identity = 105/203 (51.72%), Postives = 133/203 (65.52%), Query Frame = -3
Query:  192 EGSDSSM-DIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGTTTGRPRRCGWLDIVALKYCCQINGFSSLNLTKLDVLSELPEIQLGVAYKQVDGTPIKSFPADLVLLEQLKVEYEVLLGWQSDISSIRNYSDLPKAARQFVERIEELVGVPINYIGVGPGRDALI 797
            EG+ ++M D+D GTYPFVTSS+P+AGG CTG G+ P  +  +IGV KAY TRVG GPFPTE+L + G+ LR  G EFG TTGRPRRCGW D V  +Y  Q+NG + + LTKLDVL+ L EI + VAY  VDG      P D       K  YE + GW  DIS   ++ +LP   + +V+R+EEL G  I+ IG GP RD +I
Sbjct:  220 EGAQATMLDVDHGTYPFVTSSNPTAGGACTGTGVGPTKITRVIGVSKAYVTRVGEGPFPTELLDESGEWLRQQGHEFGVTTGRPRRCGWFDAVVNRYASQVNGLTDIVLTKLDVLTGLKEIPICVAY-DVDGERHDDMPTDQAAFAAAKPIYETMPGWDEDISDCHSFDELPATCQAYVKRLEELSGCRISVIGTGPQRDHVI 421          
BLAST of CV712293 vs. ExPASy Swiss-Prot
Match: PURA_STRCO (Adenylosuccinate synthetase OS=Streptomyces coelicolor GN=purA PE=3 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 1.089e-53
Identity = 101/201 (50.25%), Postives = 135/201 (67.16%), Query Frame = -3
Query:  192 GSDSSMDIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGTTTGRPRRCGWLDIVALKYCCQINGFSSLNLTKLDVLSELPEIQLGVAYKQVDGTPIKSFPADLVLLEQLKVEYEVLLGWQSDISSIRNYSDLPKAARQFVERIEELVGVPINYIGVGPGRDALI 794
            G  + +DID GTYPFVTSS+P+AGG CTG G+ P  +  +IG++KAYTTRVG+GPFPTE+  + G+ LR  G E G TTGR RRCGW D V  +Y  ++NG +   LTKLDVL+   +I + VAY ++DG  ++  P         K  YE L GW  DI+  +++SDLPK A+ +V+ +EE+ G PI+ IGVGPGRD  I
Sbjct:  222 GQGTLLDIDHGTYPFVTSSNPTAGGACTGAGVGPTKISRVIGILKAYTTRVGAGPFPTELFDEDGEALRRIGGERGVTTGRDRRCGWFDAVIARYATRVNGLTDFFLTKLDVLTGWEQIPVCVAY-EIDGKRVEELPYSQSDFHHAKPVYETLPGWSEDITKAKSFSDLPKNAQAYVKALEEMSGAPISAIGVGPGRDETI 421          
BLAST of CV712293 vs. ExPASy Swiss-Prot
Match: PURA_BIFLD (Adenylosuccinate synthetase OS=Bifidobacterium longum (strain DJO10A) GN=purA PE=3 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 1.089e-53
Identity = 105/203 (51.72%), Postives = 133/203 (65.52%), Query Frame = -3
Query:  192 EGSDSSM-DIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGTTTGRPRRCGWLDIVALKYCCQINGFSSLNLTKLDVLSELPEIQLGVAYKQVDGTPIKSFPADLVLLEQLKVEYEVLLGWQSDISSIRNYSDLPKAARQFVERIEELVGVPINYIGVGPGRDALI 797
            EG+ ++M D+D GTYPFVTSS+P+AGG CTG G+ P  +  +IGV KAY TRVG GPFPTE+L + G+ LR  G EFG TTGRPRRCGW D V  +Y  Q+NG + + LTKLDVL+ L EI + VAY  VDG      P D       K  YE + GW  DIS   ++ +LP   + +V+R+EEL G  I+ IG GP RD +I
Sbjct:  220 EGAQATMLDVDHGTYPFVTSSNPTAGGACTGTGVGPTKITRVIGVSKAYVTRVGEGPFPTELLDESGEWLRQQGHEFGVTTGRPRRCGWFDAVVNRYASQVNGLTDIVLTKLDVLTGLKEIPICVAY-DVDGERHDDMPTDQAAFAAAKPIYETMPGWDEDISDCHSFDELPATCQAYVKRLEELSGCRISAIGTGPQRDHVI 421          
BLAST of CV712293 vs. ExPASy Swiss-Prot
Match: PURA_BIFLO (Adenylosuccinate synthetase OS=Bifidobacterium longum GN=purA PE=3 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.422e-53
Identity = 104/203 (51.23%), Postives = 134/203 (66.01%), Query Frame = -3
Query:  192 EGSDSSM-DIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGTTTGRPRRCGWLDIVALKYCCQINGFSSLNLTKLDVLSELPEIQLGVAYKQVDGTPIKSFPADLVLLEQLKVEYEVLLGWQSDISSIRNYSDLPKAARQFVERIEELVGVPINYIGVGPGRDALI 797
            EG+ ++M D+D GTYPFVTSS+P+AGG CTG G+ P  +  ++GV KAY TRVG GPFPTE+L + G+ LR  G EFG TTGRPRRCGW D V  +Y  Q+NG + + LTKLDVL+ L EI + VAY  VDG      P D       K  YE + GW  DIS+  ++ +LP   + +V+R+EEL G  I+ IG GP RD +I
Sbjct:  220 EGAQATMLDVDHGTYPFVTSSNPTAGGACTGTGVGPTRITRVVGVSKAYVTRVGEGPFPTELLDESGEWLRQQGHEFGVTTGRPRRCGWFDAVVNRYASQVNGLTDIVLTKLDVLAGLKEIPICVAY-DVDGERHDDMPTDQAAFAAAKPIYETMPGWDEDISNCHSFDELPATCQAYVKRLEELSGCRISAIGTGPQRDHVI 421          
BLAST of CV712293 vs. ExPASy Swiss-Prot
Match: PURA_MYCTU (Adenylosuccinate synthetase OS=Mycobacterium tuberculosis GN=purA PE=3 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 2.426e-53
Identity = 102/206 (49.51%), Postives = 137/206 (66.50%), Query Frame = -3
Query:  186 IEGSDSSM-DIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGTTTGRPRRCGWLDIVALKYCCQINGFSSLNLTKLDVLSELPEIQLGVAYKQVDGTPIKSFPADLVLLEQLKVEYEVLLGWQSDISSIRNYSDLPKAARQFVERIEELVGVPINYIGVGPGRDALIFK 800
            +EGS  ++ D+D GTYP+VTSS+P+AGG   G GI P  +G ++G++KAYTTRVGSGPFPTE+  + G++L   G+EFG TTGR RRCGW D V  +Y  ++NG +   LTKLDVLS L  + + V Y ++DG   +  P     L + K  YE L GW  DIS  R + DLP  AR +V R+E+L G P++ IGVGPGR+  I +
Sbjct:  220 LEGSQGTLLDVDHGTYPYVTSSNPTAGGAAVGSGIGPTRIGTVLGILKAYTTRVGSGPFPTELFDEHGEYLSKTGREFGVTTGRRRRCGWFDAVIARYAARVNGITDYFLTKLDVLSSLESVPVCVGY-EIDGRRTRDMPMTQRDLCRAKPVYEELPGWWEDISGAREFDDLPAKARDYVLRLEQLAGAPVSCIGVGPGREQTIVR 424          
The following BLAST results are available for this feature:
BLAST of CV712293 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PURA_ANATD1.286e-5449.76Adenylosuccinate synthetase OS=Anaerocellum thermo... [more]
PURA_GEOUR2.865e-5449.75Adenylosuccinate synthetase OS=Geobacter uraniired... [more]
PURA_DESOH2.865e-5450.74Adenylosuccinate synthetase OS=Desulfococcus oleov... [more]
PURA_GEOLS4.887e-5450.00Adenylosuccinate synthetase OS=Geobacter lovleyi (... [more]
PURA_PELPD6.383e-5450.25Adenylosuccinate synthetase OS=Pelobacter propioni... [more]
PURA_BIFLI8.336e-5451.72Adenylosuccinate synthetase OS=Bifidobacterium lon... [more]
PURA_STRCO1.089e-5350.25Adenylosuccinate synthetase OS=Streptomyces coelic... [more]
PURA_BIFLD1.089e-5351.72Adenylosuccinate synthetase OS=Bifidobacterium lon... [more]
PURA_BIFLO1.422e-5351.23Adenylosuccinate synthetase OS=Bifidobacterium lon... [more]
PURA_MYCTU2.426e-5349.51Adenylosuccinate synthetase OS=Mycobacterium tuber... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001C24_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001C24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712293 ID=CV712293; Name=CV712293; organism=Citrus sinensis; type=EST; length=844bp
GCTTTGTCTCATAAAAGTTGTTATTTAAGGTATGAGTTATCAGTTAAAGA
AGTATCAACAACACGAGCAACATTTGTTAAACCAAGATGGTATTTGTCAG
CATTTGGCCATGGATGGTTTCCTTCAGAAATGAAGCTGAGAGATATAAAA
GAACAGGCGGCCTTTGGCTGTTCATTGTTTTCCTATTTAAATATGAGAGC
ATCACGTCCAGGTCCGACACCAATGTAATTTATAGGTACACCAACAAGTT
CTTCTATCCTCTCTACAAACTGACGTGCAGCCTTTGGGAGGTCTGAGTAG
TTTCTAATGGAAGAAATATCAGACTGCCATCCCAGCAGAACTTCATATTC
CACCTTCAATTGTTCAAGAAGCACAAGATCTGCAGGGAATGATTTAATTG
GTGTACCATCAACTTGTTTATAAGCAACTCCAAGCTGAATTTCTGGAAGT
TCTGATAAAACATCCAGTTTGGTGAGATTCAAAGAAGAAAAGCCGTTAAT
TTGGCAGCAGTACTTCAATGCAACTATATCAAGCCAACCACAGCGACGAG
GACGACCAGTAGTTGTGCCAAACTCTTGCCCAGCTAACCTAAGGTGGTCA
CCCCCTTGGCCCAAAATTTCCGTCGGGAAAGGACCAGAACCAACTCTCGT
AGTGTATGCTTTTACCACGCCAATTAGATCACCCACAACTCTTGGAGCAA
TGCCAAGGCCGGTGCAAATTCCGCCGGCTGATGGGCTAGAGGAAGTTACA
AATGGATAAGTTCCAAAGTCAATATCCATGGAACTGTCACTGCCTTCTAT
ATGTCATCAGACGGGTCAAATCACAACGAGTTCGATTTTGAGTT
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