CV712293

Overview
NameCV712293
Unique NameCV712293
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length844
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712293 vs. ExPASy Swiss-Prot
Match: PURA_MYCTA (Adenylosuccinate synthetase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=purA PE=3 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 2.426e-53
Identity = 102/206 (49.51%), Postives = 137/206 (66.50%), Query Frame = -3
Query:  186 IEGSDSSM-DIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGTTTGRPRRCGWLDIVALKYCCQINGFSSLNLTKLDVLSELPEIQLGVAYKQVDGTPIKSFPADLVLLEQLKVEYEVLLGWQSDISSIRNYSDLPKAARQFVERIEELVGVPINYIGVGPGRDALIFK 800
            +EGS  ++ D+D GTYP+VTSS+P+AGG   G GI P  +G ++G++KAYTTRVGSGPFPTE+  + G++L   G+EFG TTGR RRCGW D V  +Y  ++NG +   LTKLDVLS L  + + V Y ++DG   +  P     L + K  YE L GW  DIS  R + DLP  AR +V R+E+L G P++ IGVGPGR+  I +
Sbjct:  220 LEGSQGTLLDVDHGTYPYVTSSNPTAGGAAVGSGIGPTRIGTVLGILKAYTTRVGSGPFPTELFDEHGEYLSKTGREFGVTTGRRRRCGWFDAVIARYAARVNGITDYFLTKLDVLSSLESVPVCVGY-EIDGRRTRDMPMTQRDLCRAKPVYEELPGWWEDISGAREFDDLPAKARDYVLRLEQLAGAPVSCIGVGPGREQTIVR 424          
BLAST of CV712293 vs. ExPASy Swiss-Prot
Match: PURA_MYCBT (Adenylosuccinate synthetase OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=purA PE=3 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 2.426e-53
Identity = 102/206 (49.51%), Postives = 137/206 (66.50%), Query Frame = -3
Query:  186 IEGSDSSM-DIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGTTTGRPRRCGWLDIVALKYCCQINGFSSLNLTKLDVLSELPEIQLGVAYKQVDGTPIKSFPADLVLLEQLKVEYEVLLGWQSDISSIRNYSDLPKAARQFVERIEELVGVPINYIGVGPGRDALIFK 800
            +EGS  ++ D+D GTYP+VTSS+P+AGG   G GI P  +G ++G++KAYTTRVGSGPFPTE+  + G++L   G+EFG TTGR RRCGW D V  +Y  ++NG +   LTKLDVLS L  + + V Y ++DG   +  P     L + K  YE L GW  DIS  R + DLP  AR +V R+E+L G P++ IGVGPGR+  I +
Sbjct:  220 LEGSQGTLLDVDHGTYPYVTSSNPTAGGAAVGSGIGPTRIGTVLGILKAYTTRVGSGPFPTELFDEHGEYLSKTGREFGVTTGRRRRCGWFDAVIARYAARVNGITDYFLTKLDVLSSLESVPVCVGY-EIDGRRTRDMPMTQRDLCRAKPVYEELPGWWEDISGAREFDDLPAKARDYVLRLEQLAGAPVSCIGVGPGREQTIVR 424          
BLAST of CV712293 vs. ExPASy Swiss-Prot
Match: PURA_MYCBP (Adenylosuccinate synthetase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=purA PE=3 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 2.426e-53
Identity = 102/206 (49.51%), Postives = 137/206 (66.50%), Query Frame = -3
Query:  186 IEGSDSSM-DIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGTTTGRPRRCGWLDIVALKYCCQINGFSSLNLTKLDVLSELPEIQLGVAYKQVDGTPIKSFPADLVLLEQLKVEYEVLLGWQSDISSIRNYSDLPKAARQFVERIEELVGVPINYIGVGPGRDALIFK 800
            +EGS  ++ D+D GTYP+VTSS+P+AGG   G GI P  +G ++G++KAYTTRVGSGPFPTE+  + G++L   G+EFG TTGR RRCGW D V  +Y  ++NG +   LTKLDVLS L  + + V Y ++DG   +  P     L + K  YE L GW  DIS  R + DLP  AR +V R+E+L G P++ IGVGPGR+  I +
Sbjct:  220 LEGSQGTLLDVDHGTYPYVTSSNPTAGGAAVGSGIGPTRIGTVLGILKAYTTRVGSGPFPTELFDEHGEYLSKTGREFGVTTGRRRRCGWFDAVIARYAARVNGITDYFLTKLDVLSSLESVPVCVGY-EIDGRRTRDMPMTQRDLCRAKPVYEELPGWWEDISGAREFDDLPAKARDYVLRLEQLAGAPVSCIGVGPGREQTIVR 424          
BLAST of CV712293 vs. ExPASy Swiss-Prot
Match: PURA_MYCBO (Adenylosuccinate synthetase OS=Mycobacterium bovis GN=purA PE=3 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 2.426e-53
Identity = 102/206 (49.51%), Postives = 137/206 (66.50%), Query Frame = -3
Query:  186 IEGSDSSM-DIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGTTTGRPRRCGWLDIVALKYCCQINGFSSLNLTKLDVLSELPEIQLGVAYKQVDGTPIKSFPADLVLLEQLKVEYEVLLGWQSDISSIRNYSDLPKAARQFVERIEELVGVPINYIGVGPGRDALIFK 800
            +EGS  ++ D+D GTYP+VTSS+P+AGG   G GI P  +G ++G++KAYTTRVGSGPFPTE+  + G++L   G+EFG TTGR RRCGW D V  +Y  ++NG +   LTKLDVLS L  + + V Y ++DG   +  P     L + K  YE L GW  DIS  R + DLP  AR +V R+E+L G P++ IGVGPGR+  I +
Sbjct:  220 LEGSQGTLLDVDHGTYPYVTSSNPTAGGAAVGSGIGPTRIGTVLGILKAYTTRVGSGPFPTELFDEHGEYLSKTGREFGVTTGRRRRCGWFDAVIARYAARVNGITDYFLTKLDVLSSLESVPVCVGY-EIDGRRTRDMPMTQRDLCRAKPVYEELPGWWEDISGAREFDDLPAKARDYVLRLEQLAGAPVSCIGVGPGREQTIVR 424          
BLAST of CV712293 vs. ExPASy Swiss-Prot
Match: PURA_STRAW (Adenylosuccinate synthetase OS=Streptomyces avermitilis GN=purA PE=3 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 4.137e-53
Identity = 101/201 (50.25%), Postives = 133/201 (66.17%), Query Frame = -3
Query:  192 GSDSSMDIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGTTTGRPRRCGWLDIVALKYCCQINGFSSLNLTKLDVLSELPEIQLGVAYKQVDGTPIKSFPADLVLLEQLKVEYEVLLGWQSDISSIRNYSDLPKAARQFVERIEELVGVPINYIGVGPGRDALI 794
            G  + +DID GTYPFVTSS+P+AGG CTG G+ P  +  +IG++KAYTTRVG+GPFPTE+L + G+ LR  G E G TTGR RRCGW D V  +Y  ++NG +   LTKLDVL+   +I + VAY ++DG  ++  P         K  YE L GW  DI+  + + DLPK A+ +V  +EE+ G PI+ IGVGPGRD  I
Sbjct:  222 GQGTLLDIDHGTYPFVTSSNPTAGGACTGSGVGPTKISRVIGILKAYTTRVGAGPFPTELLDEDGEALRRIGGERGVTTGRDRRCGWFDAVIARYATRVNGLTDFFLTKLDVLTGWEQIPVCVAY-EIDGKRVEELPYSQTDFHHAKPIYENLPGWSEDITKAKTFEDLPKNAQAYVRALEEMSGAPISAIGVGPGRDETI 421          
BLAST of CV712293 vs. ExPASy Swiss-Prot
Match: PURA_CAEEL (Probable adenylosuccinate synthetase OS=Caenorhabditis elegans GN=C37H5.6 PE=2 SV=2)

HSP 1 Score: 208.379 bits (529), Expect = 4.137e-53
Identity = 99/206 (48.06%), Postives = 142/206 (68.93%), Query Frame = -3
Query:  186 IEGSDSSM-DIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGTTTGRPRRCGWLDIVALKYCCQINGFSSLNLTKLDVLSELPEIQLGVAYKQVDGTPIKSFPADLVLLEQLKVEYEVLLGWQSDISSIRNYSDLPKAARQFVERIEELVGVPINYIGVGPGRDALIFK 800
            +EG++ ++ DIDFGTYP+VTSS+ + GG CTG+G+ P  VG++IGVVKAY TRVG+GPFPTE+    G+ L+  G+E G TTGR RRCGW+D+  L+    ING++++ LTKLD+L   P I++ V YK ++G  + S PA       ++VEY+   GW      +R + DLP+  RQ+V+ IE+ + VPI YIGVG  R++LI +
Sbjct:  228 VEGANGALLDIDFGTYPYVTSSNSTVGGACTGIGVPPTAVGNVIGVVKAYQTRVGTGPFPTELFDSDGEKLQTIGKEVGVTTGRKRRCGWIDLFLLRRSAMINGYTAIALTKLDILDTFPTIKVAVGYK-LNGQVLSSPPAQANAWGAIEVEYKEFEGWNEPTVGVRKFEDLPEKCRQYVKFIEDFIKVPIVYIGVGAERESLIVR 432          
BLAST of CV712293 vs. ExPASy Swiss-Prot
Match: PURA_THEFY (Adenylosuccinate synthetase OS=Thermobifida fusca (strain YX) GN=purA PE=3 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 5.404e-53
Identity = 107/201 (53.23%), Postives = 132/201 (65.67%), Query Frame = -3
Query:  201 IEGSDSSM-DIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGTTTGRPRRCGWLDIVALKYCCQINGFSSLNLTKLDVLSELPEIQLGVAYKQVDGTPIKSFPADLVLLEQLKVEYEVLLGWQSDISSIRNYSDLPKAARQFVERIEELVGVPINYIGVGPGRD 800
            +EGS  ++ DID GTYPFVTSSSP+AGG C+G GI P  +  +IG++KAYTTRVGSGPFPTE+  + G+ LR  G E+GTTTGR RRCGW D    +Y  +ING +   LTKLDVLS L  I + VAY  +DG      P            YE L GW  DIS  R++ DLPK A+ +V  IEE+ G PI+ IGVGPGR+
Sbjct:  219 LEGSQGTLLDIDHGTYPFVTSSSPTAGGACSGSGIGPTRITKVIGILKAYTTRVGSGPFPTELEDEWGEWLRSRGHEYGTTTGRNRRCGWFDAPIARYATRINGITDFFLTKLDVLSGLERIPVCVAY-DIDGVRHDEIPMTQTEFHHATPIYEYLDGWNEDISQARSFDDLPKNAQAYVRAIEEMSGAPISAIGVGPGRE 418          
BLAST of CV712293 vs. ExPASy Swiss-Prot
Match: PURA_ALKMQ (Adenylosuccinate synthetase OS=Alkaliphilus metalliredigens (strain QYMF) GN=purA PE=3 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 5.404e-53
Identity = 100/205 (48.78%), Postives = 143/205 (69.76%), Query Frame = -3
Query:  186 EGSDSSM-DIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGTTTGRPRRCGWLDIVALKYCCQINGFSSLNLTKLDVLSELPEIQLGVAYKQVDGTPIKSFPADLVLLEQLKVEYEVLLGWQSDISSIRNYSDLPKAARQFVERIEELVGVPINYIGVGPGRDALIFK 797
            EG+  ++ DID GTYP+VTSS P+AGG   G GI P  +  ++G+VKAYTTRVGSG FPTE+  + GD +R+ G EFGTTTGRPRRCGW D V ++Y  +ING ++++L  LDVLS    +++   Y +++G  +  FPA++  L + K  YE L GW+ DI++++ Y +LP+ A++++ERIE  VGVPI  I VGP R+  I +
Sbjct:  220 EGAQGTLLDIDLGTYPYVTSSHPTAGGFPIGAGIGPNQIEQVLGIVKAYTTRVGSGTFPTELDNEVGDKIRIKGNEFGTTTGRPRRCGWFDGVMVRYTTRINGLTAMSLMLLDVLSGFDTLKICTGY-ELEGEMVAHFPANIKTLGKCKPIYEELPGWEEDITNMKTYEELPENAKKYIERIESYVGVPIKMISVGPKRNQTIIR 423          
BLAST of CV712293 vs. ExPASy Swiss-Prot
Match: PURA_NATTJ (Adenylosuccinate synthetase OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=purA PE=3 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 7.057e-53
Identity = 99/199 (49.75%), Postives = 140/199 (70.35%), Query Frame = -3
Query:  204 EGSDSSM-DIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGTTTGRPRRCGWLDIVALKYCCQINGFSSLNLTKLDVLSELPEIQLGVAYKQVDGTPIKSFPADLVLLEQLKVEYEVLLGWQSDISSIRNYSDLPKAARQFVERIEELVGVPINYIGVGPGR 797
            EG+  ++ D+D GTYP+VT+S+P  GG C G G  P ++  ++GVVKAY+TRVG GPFP+E+ G+ GD +R  G+E+GTTTGRPRR GWLD V L Y  +INGF+ + LT LDVLSE   I++ VAYK   G  I+ FPA   +L + +  +E L GW+ DIS I+++ +LP AA+ +++RIE+L  VP++ +  GP R
Sbjct:  220 EGAQGTLLDLDHGTYPYVTASNPVTGGACVGAGAPPHLINSVVGVVKAYSTRVGDGPFPSELTGEIGDQIREKGKEYGTTTGRPRRVGWLDTVILNYSRRINGFNHIALTLLDVLSEFDTIKICVAYK-YRGETIEHFPASQKILSECEPVFEELPGWKEDISQIQDWDELPDAAKSYIKRIEDLTSVPVSIVSYGPRR 417          
BLAST of CV712293 vs. ExPASy Swiss-Prot
Match: PURA_BIFA0 (Adenylosuccinate synthetase OS=Bifidobacterium animalis subsp. lactis (strain AD011) GN=purA PE=3 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 7.057e-53
Identity = 101/201 (50.25%), Postives = 130/201 (64.68%), Query Frame = -3
Query:  192 GSDSSMDIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGTTTGRPRRCGWLDIVALKYCCQINGFSSLNLTKLDVLSELPEIQLGVAYKQVDGTPIKSFPADLVLLEQLKVEYEVLLGWQSDISSIRNYSDLPKAARQFVERIEELVGVPINYIGVGPGRDALI 794
            G  + +DID GTYPFVTSS+P+AGG CTG G+ P  +  +IGV KAY TRVG GPFPTE+  + G+ LR  G E+G TTGRPRRCGW D V  +Y  Q+NG + + LTKLDVL+ L EI + VAY  V+G      P D       K  Y ++ GW  DIS +  + DLP+  + +V+R+EEL G  I+ IG GP RD +I
Sbjct:  222 GQATMLDIDHGTYPFVTSSNPTAGGACTGTGVGPTKIDRVIGVSKAYVTRVGEGPFPTELFDENGEWLRAQGHEYGVTTGRPRRCGWFDAVVNRYATQVNGLTDIVLTKLDVLTGLDEIPVCVAY-DVNGVRYDDMPTDQSAFAAAKPIYGMMPGWSEDISQVHAFEDLPQTCQDYVKRLEELSGCRISAIGTGPQRDHII 421          
The following BLAST results are available for this feature:
BLAST of CV712293 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PURA_MYCTA2.426e-5349.51Adenylosuccinate synthetase OS=Mycobacterium tuber... [more]
PURA_MYCBT2.426e-5349.51Adenylosuccinate synthetase OS=Mycobacterium bovis... [more]
PURA_MYCBP2.426e-5349.51Adenylosuccinate synthetase OS=Mycobacterium bovis... [more]
PURA_MYCBO2.426e-5349.51Adenylosuccinate synthetase OS=Mycobacterium bovis... [more]
PURA_STRAW4.137e-5350.25Adenylosuccinate synthetase OS=Streptomyces avermi... [more]
PURA_CAEEL4.137e-5348.06Probable adenylosuccinate synthetase OS=Caenorhabd... [more]
PURA_THEFY5.404e-5353.23Adenylosuccinate synthetase OS=Thermobifida fusca ... [more]
PURA_ALKMQ5.404e-5348.78Adenylosuccinate synthetase OS=Alkaliphilus metall... [more]
PURA_NATTJ7.057e-5349.75Adenylosuccinate synthetase OS=Natranaerobius ther... [more]
PURA_BIFA07.057e-5350.25Adenylosuccinate synthetase OS=Bifidobacterium ani... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001C24_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001C24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712293 ID=CV712293; Name=CV712293; organism=Citrus sinensis; type=EST; length=844bp
GCTTTGTCTCATAAAAGTTGTTATTTAAGGTATGAGTTATCAGTTAAAGA
AGTATCAACAACACGAGCAACATTTGTTAAACCAAGATGGTATTTGTCAG
CATTTGGCCATGGATGGTTTCCTTCAGAAATGAAGCTGAGAGATATAAAA
GAACAGGCGGCCTTTGGCTGTTCATTGTTTTCCTATTTAAATATGAGAGC
ATCACGTCCAGGTCCGACACCAATGTAATTTATAGGTACACCAACAAGTT
CTTCTATCCTCTCTACAAACTGACGTGCAGCCTTTGGGAGGTCTGAGTAG
TTTCTAATGGAAGAAATATCAGACTGCCATCCCAGCAGAACTTCATATTC
CACCTTCAATTGTTCAAGAAGCACAAGATCTGCAGGGAATGATTTAATTG
GTGTACCATCAACTTGTTTATAAGCAACTCCAAGCTGAATTTCTGGAAGT
TCTGATAAAACATCCAGTTTGGTGAGATTCAAAGAAGAAAAGCCGTTAAT
TTGGCAGCAGTACTTCAATGCAACTATATCAAGCCAACCACAGCGACGAG
GACGACCAGTAGTTGTGCCAAACTCTTGCCCAGCTAACCTAAGGTGGTCA
CCCCCTTGGCCCAAAATTTCCGTCGGGAAAGGACCAGAACCAACTCTCGT
AGTGTATGCTTTTACCACGCCAATTAGATCACCCACAACTCTTGGAGCAA
TGCCAAGGCCGGTGCAAATTCCGCCGGCTGATGGGCTAGAGGAAGTTACA
AATGGATAAGTTCCAAAGTCAATATCCATGGAACTGTCACTGCCTTCTAT
ATGTCATCAGACGGGTCAAATCACAACGAGTTCGATTTTGAGTT
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