CV712293

Overview
NameCV712293
Unique NameCV712293
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length844
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712293 vs. ExPASy Swiss-Prot
Match: PURA_PROVI (Adenylosuccinate synthetase OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=purA PE=3 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 9.217e-53
Identity = 101/206 (49.03%), Postives = 139/206 (67.48%), Query Frame = -3
Query:  186 IEGSDSSM-DIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGTTTGRPRRCGWLDIVALKYCCQINGFSSLNLTKLDVLSELPEIQLGVAYKQVDGTPIKSFPADLVLLEQLKVEYEVLLGWQSDISSIRNYSDLPKAARQFVERIEELVGVPINYIGVGPGRDALIFK 800
            +EG+  S+ D+D GTYPFVTSS+P++GG CTG GIAP  +G +IGV KAY TRVG+G FPTE+  + G+ L   G EFG TTGR RRCGW+D+VA++Y   +NG + L LTKLDVL    EIQ+  +Y  +DG  I  FP D   L ++K     + GW +  +  RN+ ++  AA+QFVE +E  + VP+ +I VGPGR+  +F+
Sbjct:  230 LEGAQGSLLDVDHGTYPFVTSSNPTSGGACTGSGIAPNHIGKVIGVCKAYMTRVGNGAFPTELFDETGEELGRVGHEFGATTGRKRRCGWIDLVAMRYAVAVNGITELALTKLDVLDGFEEIQVCNSY-TLDGKEIFDFPTDHETLSRVKPVLTPMKGWMASNADARNFEEMRPAAKQFVEFLENELEVPVTFISVGPGRNETVFR 434          
BLAST of CV712293 vs. ExPASy Swiss-Prot
Match: PURA_NOCSJ (Adenylosuccinate synthetase OS=Nocardioides sp. (strain BAA-499 / JS614) GN=purA PE=3 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.204e-52
Identity = 103/201 (51.24%), Postives = 130/201 (64.68%), Query Frame = -3
Query:  192 GSDSSMDIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGTTTGRPRRCGWLDIVALKYCCQINGFSSLNLTKLDVLSELPEIQLGVAYKQVDGTPIKSFPADLVLLEQLKVEYEVLLGWQSDISSIRNYSDLPKAARQFVERIEELVGVPINYIGVGPGRDALI 794
            G  + +D+D GTYPFVTSSS +AGG CTG GI PR +  +IG+VKAYTTRVG GPFPTE+    G+HLR  G EFGTTTGRPRRCGW D V  +Y  ++NG +   LTKLDVL+ L ++ + VAY  V G      P +          YE L GW  DIS  R  +DLP  A+ +V+ +EE+ G  I+ +GVGP RDA +
Sbjct:  227 GQATLLDVDHGTYPFVTSSSATAGGACTGSGIPPRRLEQVIGIVKAYTTRVGEGPFPTELHDDAGEHLRKVGAEFGTTTGRPRRCGWYDAVIARYAARVNGVTDFVLTKLDVLTGLEQVPVCVAY-DVGGVRHDEMPVNQTDFHHAVPIYEYLPGWWEDISGARTLADLPANAQAYVKAVEEMSGARISAVGVGPSRDATV 426          
BLAST of CV712293 vs. ExPASy Swiss-Prot
Match: PURA_MYCMM (Adenylosuccinate synthetase OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=purA PE=3 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.204e-52
Identity = 102/206 (49.51%), Postives = 135/206 (65.53%), Query Frame = -3
Query:  186 IEGSDSSM-DIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGTTTGRPRRCGWLDIVALKYCCQINGFSSLNLTKLDVLSELPEIQLGVAYKQVDGTPIKSFPADLVLLEQLKVEYEVLLGWQSDISSIRNYSDLPKAARQFVERIEELVGVPINYIGVGPGRDALIFK 800
            +EGS  ++ D+D GTYP+VTSS+P+AGG   G GI P  +  ++G++KAYTTRVGSGPFPTE+  + G++L   G EFG TTGR RRCGW D V  +Y  ++NG +   LTKLDVLS L  + + V Y ++DG      P     L + K  YE L GW  DIS+ R + DLP  AR +V R+EE+ G P++ IGVGPGRD  I +
Sbjct:  220 LEGSQGTLLDVDHGTYPYVTSSNPTAGGAAVGSGIGPTRIRTVLGILKAYTTRVGSGPFPTELFDESGEYLSKTGGEFGVTTGRRRRCGWFDAVIARYATRVNGITDYFLTKLDVLSSLETVPVCVGY-EIDGKRTSEMPMTQSDLCRAKPVYEELPGWWEDISAAREFDDLPAKARDYVLRLEEIAGAPVSCIGVGPGRDQTIVR 424          
BLAST of CV712293 vs. ExPASy Swiss-Prot
Match: PURA_FUSNN (Adenylosuccinate synthetase OS=Fusobacterium nucleatum subsp. nucleatum GN=purA PE=3 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.204e-52
Identity = 101/199 (50.75%), Postives = 141/199 (70.85%), Query Frame = -3
Query:  204 EGSDSSM-DIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGTTTGRPRRCGWLDIVALKYCCQINGFSSLNLTKLDVLSELPEIQLGVAYKQVDGTPIKSFPADLVLLEQLKVEYEVLLGWQSDISSIRNYSDLPKAARQFVERIEELVGVPINYIGVGPGR 797
            EG+ + M DI++GTYP+VTSSSP+ GG+ TG GI+PR +   IGV+KAYTTRVG GPF TEI G+ GD +R  G E+G  TGRPRRCGWLD+V  +Y  +ING + + +TK+DVLS L ++++  AY ++DG   +  PAD   L++    YE L GW  DI+ I+ Y DLP   R+++ER++E++G PI+ + VGP R
Sbjct:  219 EGAQAMMLDINYGTYPYVTSSSPTLGGVTTGAGISPRKIDKGIGVMKAYTTRVGEGPFVTEIKGEFGDKIRGIGGEYGAVTGRPRRCGWLDLVVGRYATEINGLTDIVMTKIDVLSGLGKLKICTAY-EIDGVIHEYVPADTKSLDRAIPIYEELDGWDEDITQIKKYEDLPVNCRKYLERVQEILGCPISVVSVGPDR 416          
BLAST of CV712293 vs. ExPASy Swiss-Prot
Match: PURA_CALS8 (Adenylosuccinate synthetase OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=purA PE=3 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.204e-52
Identity = 100/207 (48.31%), Postives = 142/207 (68.60%), Query Frame = -3
Query:  186 IEGSDSSM-DIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGTTTGRPRRCGWLDIVALKYCCQINGFSSLNLTKLDVLSELPEIQLGVAYKQVDGTPIKSFPADLVLLEQLKVEYEVLLGW-QSDISSIRNYSDLPKAARQFVERIEELVGVPINYIGVGPGRDALIFK 800
            +EG+ ++M D+D+GTYP+VTSS P+ GG C G GIAP+ + ++IGVVK+YTTRVG GPFPTE+L + GD +R  G+E+GTTTGRPRRCGWLD+V ++Y   ING   + LTKLD LS LP++++ V Y+   G  +  FPA L +  + +  YE   GW + +I   + Y  LPK A++++E IE+  G  +  IG G  R+ +I K
Sbjct:  220 LEGAQATMLDLDYGTYPYVTSSHPTVGGFCIGAGIAPKHIQEVIGVVKSYTTRVGKGPFPTELLDRVGDSIRERGKEYGTTTGRPRRCGWLDLVVVRYAVLINGIDKIALTKLDTLSNLPKVKVCVGYRHA-GKILDLFPASLKVAMECEPIYEEFDGWSEEEIKKAKEYDQLPKNAKKYIEFIEKETGAKVFLIGTGASREDIIIK 425          
BLAST of CV712293 vs. ExPASy Swiss-Prot
Match: PURA_CHLCH (Adenylosuccinate synthetase OS=Chlorobium chlorochromatii (strain CaD3) GN=purA PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 2.053e-52
Identity = 99/206 (48.06%), Postives = 139/206 (67.48%), Query Frame = -3
Query:  186 IEGSDSSM-DIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGTTTGRPRRCGWLDIVALKYCCQINGFSSLNLTKLDVLSELPEIQLGVAYKQVDGTPIKSFPADLVLLEQLKVEYEVLLGWQSDISSIRNYSDLPKAARQFVERIEELVGVPINYIGVGPGRDALIFK 800
            +EG+   + D+D GTYP+VTSS+P++GG CTG GIAP  +G +IG+ KAY TRVG+G FPTE+L + G+ L   G EFG TTGR RRCGWLD+VAL+Y   ING + + LTKLDVL    EI++  AY  +DG  +  FP D   L Q+   Y  L GW +  ++ R + ++   A+++V+ +EE V +P+ +I VGPGRD  +F+
Sbjct:  230 LEGAQGCLLDVDHGTYPYVTSSNPTSGGACTGSGIAPNYIGKVIGITKAYMTRVGNGAFPTELLDETGELLGKIGHEFGATTGRKRRCGWLDLVALRYSLAINGVTEIALTKLDVLDSFEEIKVCTAY-LLDGKELHDFPTDHQTLAQVTPVYTTLKGWMASNAAARTFEEMQLEAQRYVDFLEEQVQLPVTFISVGPGRDETVFR 434          
BLAST of CV712293 vs. ExPASy Swiss-Prot
Match: PURA_MYCUA (Adenylosuccinate synthetase OS=Mycobacterium ulcerans (strain Agy99) GN=purA PE=3 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 3.502e-52
Identity = 102/206 (49.51%), Postives = 135/206 (65.53%), Query Frame = -3
Query:  186 IEGSDSSM-DIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGTTTGRPRRCGWLDIVALKYCCQINGFSSLNLTKLDVLSELPEIQLGVAYKQVDGTPIKSFPADLVLLEQLKVEYEVLLGWQSDISSIRNYSDLPKAARQFVERIEELVGVPINYIGVGPGRDALIFK 800
            +EGS  ++ D+D GTYP+VTSS+P+AGG   G GI P  +  ++G++KAYTTRVGSGPFPTE+  + G++L   G EFG TTGR RRCGW D V  +Y  ++NG +   LTKLDVLS L  + + V Y ++DG      P     L + K  YE L GW  DIS+ R + DLP  AR +V R+EE+ G P++ IGVGPGRD  I +
Sbjct:  220 LEGSQGTLLDVDHGTYPYVTSSNPTAGGAAVGSGIGPTRIRTVLGILKAYTTRVGSGPFPTELFYESGEYLSKTGGEFGVTTGRRRRCGWFDAVIARYATRVNGITDYFLTKLDVLSSLETVPVCVGY-EIDGKRTSEMPMTQSDLCRAKPVYEELPGWWEDISAAREFDDLPAKARDYVLRLEEISGAPVSCIGVGPGRDQTIVR 424          
BLAST of CV712293 vs. ExPASy Swiss-Prot
Match: PURA_HELMI (Adenylosuccinate synthetase OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=purA PE=3 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 3.502e-52
Identity = 102/203 (50.25%), Postives = 134/203 (66.01%), Query Frame = -3
Query:  192 EGSDSSM-DIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGTTTGRPRRCGWLDIVALKYCCQINGFSSLNLTKLDVLSELPEIQLGVAYKQVDGTPIKSFPADLVLLEQLKVEYEVLLGWQSDISSIRNYSDLPKAARQFVERIEELVGVPINYIGVGPGRDALI 797
            EG+  ++ DID GTYPFVTSS P  GG   G GI P  +  ++GVVKAYTTRVG GPFPTE+  + GD +R AG EFGTTTGRPRRCGW D V ++Y  +++G + + +TKLDVL +LP I++ V Y+  D   I  FP  L  L Q +  YE + GW SD +  R   +LP+ AR++V+R+EEL G P   + VGP R+  I
Sbjct:  220 EGAQGTLLDIDHGTYPFVTSSHPIGGGATVGAGIGPTTINKILGVVKAYTTRVGEGPFPTELNDEMGDLIRKAGHEFGTTTGRPRRCGWFDAVIMRYSVRVSGLTCMAVTKLDVLDQLPVIKICVGYRYQDEV-ITHFPESLKKLAQCEPVYEEMPGWMSDTTGCRTMEELPEKARRYVKRLEELCGCPALLLAVGPDREQTI 421          
BLAST of CV712293 vs. ExPASy Swiss-Prot
Match: PURA_MYCA1 (Adenylosuccinate synthetase OS=Mycobacterium avium (strain 104) GN=purA PE=3 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 4.574e-52
Identity = 101/206 (49.03%), Postives = 135/206 (65.53%), Query Frame = -3
Query:  186 IEGSDSSM-DIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGTTTGRPRRCGWLDIVALKYCCQINGFSSLNLTKLDVLSELPEIQLGVAYKQVDGTPIKSFPADLVLLEQLKVEYEVLLGWQSDISSIRNYSDLPKAARQFVERIEELVGVPINYIGVGPGRDALIFK 800
            +EGS  ++ D+D GTYP+VTSS+P+AGG   G GI P  +  ++G++KAYTTRVGSGPFPTE+  + G++L   G EFG TTGR RRCGW D V  +Y  ++NG +   LTKLDVLS L  + + V Y+ +DG  I   P     L + +  YE L GW  DIS+ R + DLP  AR +V R+EEL G  ++ IGVGPGR+  I +
Sbjct:  220 LEGSQGTLLDVDHGTYPYVTSSNPTAGGAAVGSGIGPTRITAVLGILKAYTTRVGSGPFPTELFDENGEYLSKTGGEFGVTTGRRRRCGWFDAVVARYATRVNGITDFFLTKLDVLSSLETVPVCVGYR-IDGARINEMPMTQSDLHRAEPIYEELPGWWEDISAAREFDDLPAKARDYVLRLEELAGAHVSCIGVGPGREQTIVR 424          
BLAST of CV712293 vs. ExPASy Swiss-Prot
Match: PURA_CLOD6 (Adenylosuccinate synthetase OS=Clostridium difficile (strain 630) GN=purA PE=3 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 4.574e-52
Identity = 100/205 (48.78%), Postives = 138/205 (67.32%), Query Frame = -3
Query:  186 EGSDSSM-DIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQGGDHLRLAGQEFGTTTGRPRRCGWLDIVALKYCCQINGFSSLNLTKLDVLSELPEIQLGVAYKQVDGTPIKSFPADLVLLEQLKVEYEVLLGWQSDISSIRNYSDLPKAARQFVERIEELVGVPINYIGVGPGRDALIFK 797
            EG+  ++ D+D GTYPFVTSS P++GG   G GI P ++ D++G+VKAYTTRVG GPF TE + + GD +R  G EFG TTGRPRRCGW D V +KY  ++NG +S++   LDVL+   +I++  +YK  D   I  FPA L  L + +  YE L GW  DI+ I N+ DLP+ A+++V +IEELVGV ++ + VGP R   I +
Sbjct:  221 EGAQGTLLDLDLGTYPFVTSSHPTSGGFAIGAGIGPNMIKDVVGIVKAYTTRVGEGPFVTEQINETGDKIREQGHEFGVTTGRPRRCGWFDAVIVKYAARVNGLTSISFMLLDVLTGFDKIKVCTSYKMGDKI-ITDFPASLDDLAKCEPVYEELDGWNEDITQIDNFDDLPENAKKYVAKIEELVGVSVDMVSVGPNRAQTIIR 424          
The following BLAST results are available for this feature:
BLAST of CV712293 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PURA_PROVI9.217e-5349.03Adenylosuccinate synthetase OS=Prosthecochloris vi... [more]
PURA_NOCSJ1.204e-5251.24Adenylosuccinate synthetase OS=Nocardioides sp. (s... [more]
PURA_MYCMM1.204e-5249.51Adenylosuccinate synthetase OS=Mycobacterium marin... [more]
PURA_FUSNN1.204e-5250.75Adenylosuccinate synthetase OS=Fusobacterium nucle... [more]
PURA_CALS81.204e-5248.31Adenylosuccinate synthetase OS=Caldicellulosirupto... [more]
PURA_CHLCH2.053e-5248.06Adenylosuccinate synthetase OS=Chlorobium chloroch... [more]
PURA_MYCUA3.502e-5249.51Adenylosuccinate synthetase OS=Mycobacterium ulcer... [more]
PURA_HELMI3.502e-5250.25Adenylosuccinate synthetase OS=Heliobacterium mode... [more]
PURA_MYCA14.574e-5249.03Adenylosuccinate synthetase OS=Mycobacterium avium... [more]
PURA_CLOD64.574e-5248.78Adenylosuccinate synthetase OS=Clostridium diffici... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001C24_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001C24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712293 ID=CV712293; Name=CV712293; organism=Citrus sinensis; type=EST; length=844bp
GCTTTGTCTCATAAAAGTTGTTATTTAAGGTATGAGTTATCAGTTAAAGA
AGTATCAACAACACGAGCAACATTTGTTAAACCAAGATGGTATTTGTCAG
CATTTGGCCATGGATGGTTTCCTTCAGAAATGAAGCTGAGAGATATAAAA
GAACAGGCGGCCTTTGGCTGTTCATTGTTTTCCTATTTAAATATGAGAGC
ATCACGTCCAGGTCCGACACCAATGTAATTTATAGGTACACCAACAAGTT
CTTCTATCCTCTCTACAAACTGACGTGCAGCCTTTGGGAGGTCTGAGTAG
TTTCTAATGGAAGAAATATCAGACTGCCATCCCAGCAGAACTTCATATTC
CACCTTCAATTGTTCAAGAAGCACAAGATCTGCAGGGAATGATTTAATTG
GTGTACCATCAACTTGTTTATAAGCAACTCCAAGCTGAATTTCTGGAAGT
TCTGATAAAACATCCAGTTTGGTGAGATTCAAAGAAGAAAAGCCGTTAAT
TTGGCAGCAGTACTTCAATGCAACTATATCAAGCCAACCACAGCGACGAG
GACGACCAGTAGTTGTGCCAAACTCTTGCCCAGCTAACCTAAGGTGGTCA
CCCCCTTGGCCCAAAATTTCCGTCGGGAAAGGACCAGAACCAACTCTCGT
AGTGTATGCTTTTACCACGCCAATTAGATCACCCACAACTCTTGGAGCAA
TGCCAAGGCCGGTGCAAATTCCGCCGGCTGATGGGCTAGAGGAAGTTACA
AATGGATAAGTTCCAAAGTCAATATCCATGGAACTGTCACTGCCTTCTAT
ATGTCATCAGACGGGTCAAATCACAACGAGTTCGATTTTGAGTT
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