EY660021

Overview
NameEY660021
Unique NameEY660021
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length560
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY660021 vs. ExPASy Swiss-Prot
Match: H3_PSAMI (Histone H3, embryonic OS=Psammechinus miliaris PE=2 SV=2)

HSP 1 Score: 166.777 bits (421), Expect = 6.560e-41
Identity = 84/93 (90.32%), Postives = 88/93 (94.62%), Query Frame = 2 
Query:   80 GGVKKPHRYRFAPVNLREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 358
            GGVKKPHRYR   V LREIR+YQKSTELLIRKLPFQRLVREIAQDFKT+LRFQS AV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQ
Sbjct:   34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTELRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 126
[Close]
BLAST of EY660021 vs. ExPASy Swiss-Prot
Match: H3_PISOC (Histone H3, embryonic OS=Pisaster ochraceus PE=2 SV=2)

HSP 1 Score: 166.777 bits (421), Expect = 6.560e-41
Identity = 84/93 (90.32%), Postives = 88/93 (94.62%), Query Frame = 2 
Query:   80 GGVKKPHRYRFAPVNLREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 358
            GGVKKPHRYR   V LREIR+YQKSTELLIRKLPFQRLVREIAQDFKT+LRFQS AV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQ
Sbjct:   34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTELRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 126
[Close]
BLAST of EY660021 vs. ExPASy Swiss-Prot
Match: H3_PISBR (Histone H3, embryonic OS=Pisaster brevispinus PE=2 SV=2)

HSP 1 Score: 166.777 bits (421), Expect = 6.560e-41
Identity = 84/93 (90.32%), Postives = 88/93 (94.62%), Query Frame = 2 
Query:   80 GGVKKPHRYRFAPVNLREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 358
            GGVKKPHRYR   V LREIR+YQKSTELLIRKLPFQRLVREIAQDFKT+LRFQS AV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQ
Sbjct:   34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTELRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 126
[Close]
BLAST of EY660021 vs. ExPASy Swiss-Prot
Match: H3_PARLI (Histone H3, embryonic OS=Paracentrotus lividus PE=2 SV=2)

HSP 1 Score: 166.777 bits (421), Expect = 6.560e-41
Identity = 84/93 (90.32%), Postives = 88/93 (94.62%), Query Frame = 2 
Query:   80 GGVKKPHRYRFAPVNLREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 358
            GGVKKPHRYR   V LREIR+YQKSTELLIRKLPFQRLVREIAQDFKT+LRFQS AV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQ
Sbjct:   34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTELRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 126
[Close]
BLAST of EY660021 vs. ExPASy Swiss-Prot
Match: H3_LYTPI (Histone H3, embryonic OS=Lytechinus pictus PE=2 SV=2)

HSP 1 Score: 166.777 bits (421), Expect = 6.560e-41
Identity = 84/93 (90.32%), Postives = 88/93 (94.62%), Query Frame = 2 
Query:   80 GGVKKPHRYRFAPVNLREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 358
            GGVKKPHRYR   V LREIR+YQKSTELLIRKLPFQRLVREIAQDFKT+LRFQS AV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQ
Sbjct:   34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTELRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 126
[Close]
BLAST of EY660021 vs. ExPASy Swiss-Prot
Match: H3_DERIM (Histone H3, embryonic OS=Dermasterias imbricata PE=2 SV=2)

HSP 1 Score: 166.777 bits (421), Expect = 6.560e-41
Identity = 84/93 (90.32%), Postives = 88/93 (94.62%), Query Frame = 2 
Query:   80 GGVKKPHRYRFAPVNLREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 358
            GGVKKPHRYR   V LREIR+YQKSTELLIRKLPFQRLVREIAQDFKT+LRFQS AV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQ
Sbjct:   34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTELRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 126
[Close]
BLAST of EY660021 vs. ExPASy Swiss-Prot
Match: H32_ENCAL (Histone H3.2 OS=Encephalartos altensteinii PE=1 SV=2)

HSP 1 Score: 166.777 bits (421), Expect = 6.560e-41
Identity = 85/93 (91.40%), Postives = 87/93 (93.55%), Query Frame = 2 
Query:   80 GGVKKPHRYRFAPVNLREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 358
            GGVKKPHR+R   V LREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS AV ALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ
Sbjct:   34 GGVKKPHRFRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 126
[Close]
BLAST of EY660021 vs. ExPASy Swiss-Prot
Match: H33_TRIPS (Histone H3.3 OS=Trichinella pseudospiralis GN=HHT3 PE=2 SV=3)

HSP 1 Score: 166.392 bits (420), Expect = 8.568e-41
Identity = 85/93 (91.40%), Postives = 87/93 (93.55%), Query Frame = 2 
Query:   80 GGVKKPHRYRFAPVNLREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 358
            GGVKKPHRYR   V LREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS A+ ALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ
Sbjct:   34 GGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 126
[Close]
BLAST of EY660021 vs. ExPASy Swiss-Prot
Match: H3_MASBA (Histone H3 OS=Mastigamoeba balamuthi PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.119e-40
Identity = 84/93 (90.32%), Postives = 87/93 (93.55%), Query Frame = 2 
Query:   80 GGVKKPHRYRFAPVNLREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 358
            GGVKKPHR+R   V LREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS A+ ALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ
Sbjct:   33 GGVKKPHRFRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 125
[Close]
BLAST of EY660021 vs. ExPASy Swiss-Prot
Match: H33B_LILLO (Histone H3.3b OS=Lilium longiflorum GN=soH3-1 PE=2 SV=3)

HSP 1 Score: 166.007 bits (419), Expect = 1.119e-40
Identity = 83/93 (89.25%), Postives = 87/93 (93.55%), Query Frame = 2 
Query:   80 GGVKKPHRYRFAPVNLREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 358
            GG+K+P RYR   V LREIRKYQKSTELLIRKLPFQRLVREIAQD+KTDLRFQSHAVLALQE AEAYLVG+FEDTNLCAIHAKRVTIMPKDIQ
Sbjct:   35 GGMKRPRRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDYKTDLRFQSHAVLALQEGAEAYLVGIFEDTNLCAIHAKRVTIMPKDIQ 127
The following BLAST results are available for this feature:
BLAST of EY660021 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 191
Match NameE-valueIdentityDescription
H3_PSAMI6.560e-4190.32Histone H3, embryonic OS=Psammechinus miliaris PE=... [more]
H3_PISOC6.560e-4190.32Histone H3, embryonic OS=Pisaster ochraceus PE=2 S... [more]
H3_PISBR6.560e-4190.32Histone H3, embryonic OS=Pisaster brevispinus PE=2... [more]
H3_PARLI6.560e-4190.32Histone H3, embryonic OS=Paracentrotus lividus PE=... [more]
H3_LYTPI6.560e-4190.32Histone H3, embryonic OS=Lytechinus pictus PE=2 SV... [more]
H3_DERIM6.560e-4190.32Histone H3, embryonic OS=Dermasterias imbricata PE... [more]
H32_ENCAL6.560e-4191.40Histone H3.2 OS=Encephalartos altensteinii PE=1 SV... [more]
H33_TRIPS8.568e-4191.40Histone H3.3 OS=Trichinella pseudospiralis GN=HHT3... [more]
H3_MASBA1.119e-4090.32Histone H3 OS=Mastigamoeba balamuthi PE=2 SV=1[more]
H33B_LILLO1.119e-4089.25Histone H3.3b OS=Lilium longiflorum GN=soH3-1 PE=2... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-017-F09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660021 ID=EY660021; Name=EY660021; organism=Citrus sinensis; type=EST; length=560bp
GTGGACGCCTGCGGTCCGGTCCGGAATTCGTCCTCACGCGCGCGTCCGAN
AAGGNCTTTCATNAAGAGGGGNNAGNANNGGTGGTGTTAAGAAGCCTCAT
CGTTACCGTTTTGCACCTGTCAACCTTCGAGAAATTCGCAAGTACCAGAA
GAGTACCGAGCTGCTTATCAGGAAACTCCCATTCCAGAGACTTGTTCGTG
AAATTGCTCAGGACTTTAAGACTGATCTGCGTTTCCAGAGCCATGCAGTG
CTGGCCCTGCAGGAGGCAGCGGAGGCTTACCTTGTTGGTCTCTTCGAGGA
CACTAACCTCTGCGCCATTCATGCAAAGCGTGTCACTATTATGCCCAAGG
ACATACAGCTTGCCCGTAGGATCCGTGGCGAGCGTGCTTAAGCGTAATTG
CTGGTTGCTTCAATTTGAATGACTGGAAGGGAAGGGGGCAGTTGTAATGT
GTTAATTTGTACGTGGGGGATTGGTGGGGGGGTAGAATACGTGTCTANCT
CTTGTTAATTAGCAATATATATATAAATGCAAGCCTGTGTCTGAAAAAGA
AGAAGAAAAA
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