CV712205
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712205 vs. ExPASy Swiss-Prot
Match: COPG2_MOUSE (Coatomer subunit gamma-2 OS=Mus musculus GN=Copg2 PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 5.342e-28 Identity = 74/204 (36.27%), Postives = 110/204 (53.92%), Query Frame = 2 Query: 5 EQLLENVTVIVDXXXXXXXXXXXXKPLRSLPYDSPGQTFVAFEKPEGVPAV--GKFSNMLRFIVKEVDPTTXXXXXXXXXXXYQLEDLEVVAADYVMKVGVSNFRNAWESIGPDFERVDEYGLGPRESLAEAVSAVISLLGMQPCEGTEVVANNSRSHTCLLSGVFIGNVKVLVRLQFGI-DGPKEVAMKLAVRSEDDNVSDMI 607 +QLLE VTV ++ P SLPY+ PG + P+ P G FS ++F V++ DP T Y LEDLEV +D++ K+ NF AWE +G FE+ + + L ++L EAV+ +I+ LGMQPCE ++ V N SH+ L+GV+ G +LVR + + DG V M++ VRS++ D+I Sbjct: 668 DQLLEKVTVQMEPSDSYEVLCCIPAP--SLPYNQPGICYTLVRLPDEDPTAVAGTFSCTMKFTVRDCDPNTGVPDEDGYDDEYVLEDLEVTVSDHIQKILKPNFAAAWEEVGDAFEKEETFALSSTKTLEEAVNNIITFLGMQPCERSDKVPENKNSHSLYLAGVYRGGYDLLVRSRLALADG---VTMQVTVRSKERTPVDVI 866
BLAST of CV712205 vs. ExPASy Swiss-Prot
Match: COPG2_TAKRU (Coatomer subunit gamma-2 OS=Takifugu rubripes GN=copg2 PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 9.111e-28 Identity = 75/204 (36.76%), Postives = 106/204 (51.96%), Query Frame = 2 Query: 5 EQLLENVTVIVDXXXXXXXXXXXXKPLRSLPYDSPGQTFVAFEKPEGVPAVGK--FSNMLRFIVKEVDPTTXXXXXXXXXXXYQLEDLEVVAADYVMKVGVSNFRNAWESIGPDFERVDEYGLGPRESLAEAVSAVISLLGMQPCEGTEVVANNSRSHTCLLSGVFIGNVKVLVRLQFGI-DGPKEVAMKLAVRSEDDNVSDMI 607 +QLL+ V V ++ P SLPY PG + P+ P FS ++++V++ DP T Y LEDLEV D++ KV NF AWE +G +FE+ + + L +L EAV +IS LGMQPCE ++ V N SH L+GVF G VLVR + + DG V M++ VRS ++ V D+I Sbjct: 670 DQLLQKVLVQMEPSEAYEVIHYIPAP--SLPYSQPGSCYSLVRLPDDDPTAVSCTFSCTMKYLVRDCDPNTGEPDDDGYDDEYVLEDLEVTVPDHIQKVLKPNFGAAWEEVGDEFEKEETFALASVRTLDEAVGNIISFLGMQPCERSDKVPENKNSHVLFLAGVFRGGHDVLVRARLALADG---VTMQVTVRSSEETVVDVI 868
BLAST of CV712205 vs. ExPASy Swiss-Prot
Match: COPG_MOUSE (Coatomer subunit gamma OS=Mus musculus GN=Copg PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.554e-27 Identity = 74/203 (36.45%), Postives = 107/203 (52.71%), Query Frame = 2 Query: 5 EQLLENVTVIVDXXXXXXXXXXXXKPLRSLPYDSPGQ--TFVAFEKPEGVPAVGKFSNMLRFIVKEVDPTTXXXXXXXXXXXYQLEDLEVVAADYVMKVGVSNFRNAWESIGPDFERVDEYGLGPRESLAEAVSAVISLLGMQPCEGTEVVANNSRSHTCLLSGVFIGNVKVLVRLQFGIDGPKEVAMKLAVRSEDDNVSDMI 607 +Q LENVTV ++ P RSLPY+ PG T VA + FS +++F VK+ DP T Y LEDLEV AD++ KV NF AW+ +G +FE+ + + L ++L EAV ++ LGM PCE ++ V N +HT LL+GVF G +LVR + + V M++ RS ++ D+I Sbjct: 671 DQTLENVTVQMEPTEAYEVLSYV--PARSLPYNQPGTCYTLVALPTEDPTAVACTFSCVMKFTVKDCDPNTGEIDEEGYEDEYVLEDLEVTVADHIQKVMKVNFEAAWDEVGDEFEKEETFTLSTIKTLEEAVGNIVKFLGMHPCERSDKVPENKNTHTLLLAGVFRGGHDILVRSRLLL--LDTVTMQVTARSSEELPVDII 869
BLAST of CV712205 vs. ExPASy Swiss-Prot
Match: COPG2_XENLA (Coatomer subunit gamma-2 OS=Xenopus laevis GN=copg2 PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.718e-26 Identity = 73/204 (35.78%), Postives = 108/204 (52.94%), Query Frame = 2 Query: 5 EQLLENVTVIVDXXXXXXXXXXXXKPLRSLPYDSPGQTFVAFEKPEGVPAVGK--FSNMLRFIVKEVDPTTXXXXXXXXXXXYQLEDLEVVAADYVMKVGVSNFRNAWESIGPDFERVDEYGLGPRESLAEAVSAVISLLGMQPCEGTEVVANNSRSHTCLLSGVFIGNVKVLVRLQFGI-DGPKEVAMKLAVRSEDDNVSDMI 607 +QLLE VTV ++ P SL Y+ PG + P+ P FS ++F+V++ DP T Y LEDLE+ +D++ KV NF +WE +G +E+ + + L ++L EAV+ +I LGMQPCE ++ V N SH LSGVF G LVR + + DG V M++ VRS+D+ +D+I Sbjct: 669 DQLLEKVTVQMEPSEAYEVLHYVPAP--SLTYNQPGICYTLVSLPDDDPTAVSCTFSCTMKFVVRDCDPQTGVPDDEGYSDEYVLEDLELSLSDHIQKVLKPNFGASWEEVGDAYEKEETFALTTTKTLEEAVNNIIKFLGMQPCERSDKVPENKNSHVLYLSGVFRGGHDALVRSRLALADG---VTMQVTVRSQDETPADVI 867
BLAST of CV712205 vs. ExPASy Swiss-Prot
Match: COPG_DICDI (Coatomer subunit gamma OS=Dictyostelium discoideum GN=copG PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 6.757e-23 Identity = 68/206 (33.01%), Postives = 102/206 (49.51%), Query Frame = 2 Query: 5 EQLLENVTVIVDXXXXXXXXXXXXKPLRSLPYDSPGQTFVAFEKPEGVPAVG----KFSNMLRFIVKEVDPTTXXXXXXXXXXXYQLEDLEVVAADYVMKVGVSNFRNAWESIGPDFERVDEYGLGPRESLAEAVSAVISLLGMQPCEGTEVVANNSRSHTCLLSGVFIGNVKVLVRLQFGID-GPKEVAMKLAVRSEDDNVSDMI 607 EQ L NV+V + P+ LPY P Q +VA +PA G FSN L+F VKEVDP+T Y LE LE+V D++ + V NF W+ + D + V + L +S+ EAV +I LGM P E +EVV S H L+G + N + VR + +D ++L ++S+D++++D + Sbjct: 689 EQQLSNVSVKMVPSDPKLLKYECSIPIDVLPYGEPQQCYVAIRY---IPANGYPLCSFSNALKFKVKEVDPSTGELDEPGYDDQYSLERLEIVPKDFLNRAFVGNFSEEWKKMSEDTQLVQTFSLVGVKSIDEAVKQIIKTLGMAPAEKSEVVTPKSAKHILYLTGKSLNNQLIYVRARMKLDQSQTNTDVELTIKSDDESLNDFV 891
BLAST of CV712205 vs. ExPASy Swiss-Prot
Match: COPG_CAEEL (Probable coatomer subunit gamma OS=Caenorhabditis elegans GN=T14G10.5 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.035e-19 Identity = 55/174 (31.61%), Postives = 88/174 (50.57%), Query Frame = 2 Query: 92 LPYDSPGQTFVAFEKPEGVPAVGKFSNMLRFIVKEVDPTTXXXXXXXXXXX-YQLEDLEVVAADYVMKVGVSNFRNAWESIGPDFERVDEYGLGPRESLAEAVSAVISLLGMQPCEGTEVVANNSRSHTCLLSGVFIGNVKVLVRLQFGID-GPKEVAMKLAVRSEDDNVSDMI 607 LPY F E P+ G +L+F V +VDPT+ Y LE+++V +D V V S+F +AWE++G D R + + L E++ +AV + +LG+ PCE ++ V HT LSGVF G VL + +D +AM + ++S + V+D++ Sbjct: 692 LPYGEVHSAFSLLEFPDSGAISGSLGAILKFKVMDVDPTSGEPDSDDTYEQTYVLEEVDVNVSDSVQGVAKSSFGSAWEALGDDATREETFQLSTVENIPDAVKKISEILGLVPCERSDRVPEGKTQHTVFLSGVFRGGYDVLSKATVAVDPNDNSIAMNIIIKSNEPLVADLV 865
BLAST of CV712205 vs. ExPASy Swiss-Prot
Match: COPG_SCHPO (Probable coatomer subunit gamma OS=Schizosaccharomyces pombe GN=sec21 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.196e-11 Identity = 52/170 (30.59%), Postives = 83/170 (48.82%), Query Frame = 2 Query: 107 PGQTFVAFEKPEGVP-AVGKFSNMLRFIVKEVDPTTXXXXXXXXXXXYQLEDLEVVAADYVMKVGVSNFRNAWESIGPDFERVDEYGLGPRESLAEAVSAVISLLGMQPCEGTEVVANNSRSHTCLLSGVFIGNVKV--LVRLQFGIDGPKEVAMKLAVRSEDDNVSDMI 607 P FV+F+ + VP + +N L+F KE+D T Y+++DL+V A D++ SNF ++S+ + E + Y L +S S V LL MQP EGTE + H LSG + KV LV++ DG + + +K+ R E D+ +++ Sbjct: 735 PVSIFVSFKFNDSVPYPLTTLTNTLQFTTKEIDIHTGEPEEEGYEDEYKIDDLDVSAGDFISPAYESNFDGLFDSL--EHEASEVYVLSLLDSFRSTCSRVAELLQMQPLEGTE-NPTDKPVHVMKLSGKLVNGEKVLALVKMAHSKDG-EGITIKVIARGESDSSVELV 900 The following BLAST results are available for this feature:
BLAST of CV712205 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712205 ID=CV712205; Name=CV712205; organism=Citrus sinensis; type=EST; length=783bpback to top |