CV712204
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712204 vs. ExPASy Swiss-Prot
Match: COPG2_MOUSE (Coatomer subunit gamma-2 OS=Mus musculus GN=Copg2 PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 6.016e-28 Identity = 75/204 (36.76%), Postives = 111/204 (54.41%), Query Frame = -2 Query: 234 EQLLENVTVIVDXXXXXXXXXXXSKPLRSLPYDSPGQTFVAFEKPEGVPAV--GKFSNMLRFIVKEVDPTTXXXXXXXXXXEYQLEDLEVVAADYVMKVGVSNFRNAWESIGPDFERVDEYGLGPRESLAEAVSAVISLLGMQPCEGTEVVANNSRSHTCLLSGVFIGNVKVLVRLQFGI-DGPKEVAMKLAVRSEDDNVSDMI 836 +QLLE VTV ++ P SLPY+ PG + P+ P G FS ++F V++ DP T EY LEDLEV +D++ K+ NF AWE +G FE+ + + L ++L EAV+ +I+ LGMQPCE ++ V N SH+ L+GV+ G +LVR + + DG V M++ VRS++ D+I Sbjct: 668 DQLLEKVTVQMEPSDSYEVLCCIPAP--SLPYNQPGICYTLVRLPDEDPTAVAGTFSCTMKFTVRDCDPNTGVPDEDGYDDEYVLEDLEVTVSDHIQKILKPNFAAAWEEVGDAFEKEETFALSSTKTLEEAVNNIITFLGMQPCERSDKVPENKNSHSLYLAGVYRGGYDLLVRSRLALADG---VTMQVTVRSKERTPVDVI 866
BLAST of CV712204 vs. ExPASy Swiss-Prot
Match: COPG2_TAKRU (Coatomer subunit gamma-2 OS=Takifugu rubripes GN=copg2 PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 1.026e-27 Identity = 76/204 (37.25%), Postives = 107/204 (52.45%), Query Frame = -2 Query: 234 EQLLENVTVIVDXXXXXXXXXXXSKPLRSLPYDSPGQTFVAFEKPEGVPAVGK--FSNMLRFIVKEVDPTTXXXXXXXXXXEYQLEDLEVVAADYVMKVGVSNFRNAWESIGPDFERVDEYGLGPRESLAEAVSAVISLLGMQPCEGTEVVANNSRSHTCLLSGVFIGNVKVLVRLQFGI-DGPKEVAMKLAVRSEDDNVSDMI 836 +QLL+ V V ++ P SLPY PG + P+ P FS ++++V++ DP T EY LEDLEV D++ KV NF AWE +G +FE+ + + L +L EAV +IS LGMQPCE ++ V N SH L+GVF G VLVR + + DG V M++ VRS ++ V D+I Sbjct: 670 DQLLQKVLVQMEPSEAYEVIHYIPAP--SLPYSQPGSCYSLVRLPDDDPTAVSCTFSCTMKYLVRDCDPNTGEPDDDGYDDEYVLEDLEVTVPDHIQKVLKPNFGAAWEEVGDEFEKEETFALASVRTLDEAVGNIISFLGMQPCERSDKVPENKNSHVLFLAGVFRGGHDVLVRARLALADG---VTMQVTVRSSEETVVDVI 868
BLAST of CV712204 vs. ExPASy Swiss-Prot
Match: COPG_MOUSE (Coatomer subunit gamma OS=Mus musculus GN=Copg PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.750e-27 Identity = 75/203 (36.95%), Postives = 108/203 (53.20%), Query Frame = -2 Query: 234 EQLLENVTVIVDXXXXXXXXXXXSKPLRSLPYDSPGQ--TFVAFEKPEGVPAVGKFSNMLRFIVKEVDPTTXXXXXXXXXXEYQLEDLEVVAADYVMKVGVSNFRNAWESIGPDFERVDEYGLGPRESLAEAVSAVISLLGMQPCEGTEVVANNSRSHTCLLSGVFIGNVKVLVRLQFGIDGPKEVAMKLAVRSEDDNVSDMI 836 +Q LENVTV ++ P RSLPY+ PG T VA + FS +++F VK+ DP T EY LEDLEV AD++ KV NF AW+ +G +FE+ + + L ++L EAV ++ LGM PCE ++ V N +HT LL+GVF G +LVR + + V M++ RS ++ D+I Sbjct: 671 DQTLENVTVQMEPTEAYEVLSYV--PARSLPYNQPGTCYTLVALPTEDPTAVACTFSCVMKFTVKDCDPNTGEIDEEGYEDEYVLEDLEVTVADHIQKVMKVNFEAAWDEVGDEFEKEETFTLSTIKTLEEAVGNIVKFLGMHPCERSDKVPENKNTHTLLLAGVFRGGHDILVRSRLLL--LDTVTMQVTARSSEELPVDII 869
BLAST of CV712204 vs. ExPASy Swiss-Prot
Match: COPG2_XENLA (Coatomer subunit gamma-2 OS=Xenopus laevis GN=copg2 PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.935e-26 Identity = 74/204 (36.27%), Postives = 109/204 (53.43%), Query Frame = -2 Query: 234 EQLLENVTVIVDXXXXXXXXXXXSKPLRSLPYDSPGQTFVAFEKPEGVPAVGK--FSNMLRFIVKEVDPTTXXXXXXXXXXEYQLEDLEVVAADYVMKVGVSNFRNAWESIGPDFERVDEYGLGPRESLAEAVSAVISLLGMQPCEGTEVVANNSRSHTCLLSGVFIGNVKVLVRLQFGI-DGPKEVAMKLAVRSEDDNVSDMI 836 +QLLE VTV ++ P SL Y+ PG + P+ P FS ++F+V++ DP T EY LEDLE+ +D++ KV NF +WE +G +E+ + + L ++L EAV+ +I LGMQPCE ++ V N SH LSGVF G LVR + + DG V M++ VRS+D+ +D+I Sbjct: 669 DQLLEKVTVQMEPSEAYEVLHYVPAP--SLTYNQPGICYTLVSLPDDDPTAVSCTFSCTMKFVVRDCDPQTGVPDDEGYSDEYVLEDLELSLSDHIQKVLKPNFGASWEEVGDAYEKEETFALTTTKTLEEAVNNIIKFLGMQPCERSDKVPENKNSHVLYLSGVFRGGHDALVRSRLALADG---VTMQVTVRSQDETPADVI 867
BLAST of CV712204 vs. ExPASy Swiss-Prot
Match: COPG_DICDI (Coatomer subunit gamma OS=Dictyostelium discoideum GN=copG PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 7.610e-23 Identity = 69/206 (33.50%), Postives = 104/206 (50.49%), Query Frame = -2 Query: 234 EQLLENVTVIVDXXXXXXXXXXXSKPLRSLPYDSPGQTFVAFEKPEGVPAVG----KFSNMLRFIVKEVDPTTXXXXXXXXXXEYQLEDLEVVAADYVMKVGVSNFRNAWESIGPDFERVDEYGLGPRESLAEAVSAVISLLGMQPCEGTEVVANNSRSHTCLLSGVFIGNVKVLVRLQFGID-GPKEVAMKLAVRSEDDNVSDMI 836 EQ L NV+V + S P+ LPY P Q +VA +PA G FSN L+F VKEVDP+T +Y LE LE+V D++ + V NF W+ + D + V + L +S+ EAV +I LGM P E +EVV S H L+G + N + VR + +D ++L ++S+D++++D + Sbjct: 689 EQQLSNVSVKMVPSDPKLLKYECSIPIDVLPYGEPQQCYVAIRY---IPANGYPLCSFSNALKFKVKEVDPSTGELDEPGYDDQYSLERLEIVPKDFLNRAFVGNFSEEWKKMSEDTQLVQTFSLVGVKSIDEAVKQIIKTLGMAPAEKSEVVTPKSAKHILYLTGKSLNNQLIYVRARMKLDQSQTNTDVELTIKSDDESLNDFV 891
BLAST of CV712204 vs. ExPASy Swiss-Prot
Match: COPG_CAEEL (Probable coatomer subunit gamma OS=Caenorhabditis elegans GN=T14G10.5 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.291e-19 Identity = 55/174 (31.61%), Postives = 89/174 (51.15%), Query Frame = -2 Query: 234 LPYDSPGQTFVAFEKPEGVPAVGKFSNMLRFIVKEVDPTTXXXXXXXXXXE-YQLEDLEVVAADYVMKVGVSNFRNAWESIGPDFERVDEYGLGPRESLAEAVSAVISLLGMQPCEGTEVVANNSRSHTCLLSGVFIGNVKVLVRLQFGID-GPKEVAMKLAVRSEDDNVSDMI 749 LPY F E P+ G +L+F V +VDPT+ + Y LE+++V +D V V S+F +AWE++G D R + + L E++ +AV + +LG+ PCE ++ V HT LSGVF G VL + +D +AM + ++S + V+D++ Sbjct: 692 LPYGEVHSAFSLLEFPDSGAISGSLGAILKFKVMDVDPTSGEPDSDDTYEQTYVLEEVDVNVSDSVQGVAKSSFGSAWEALGDDATREETFQLSTVENIPDAVKKISEILGLVPCERSDRVPEGKTQHTVFLSGVFRGGYDVLSKATVAVDPNDNSIAMNIIIKSNEPLVADLV 865
BLAST of CV712204 vs. ExPASy Swiss-Prot
Match: COPG_SCHPO (Probable coatomer subunit gamma OS=Schizosaccharomyces pombe GN=sec21 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.346e-11 Identity = 53/170 (31.18%), Postives = 84/170 (49.41%), Query Frame = -2 Query: 234 PGQTFVAFEKPEGVP-AVGKFSNMLRFIVKEVDPTTXXXXXXXXXXEYQLEDLEVVAADYVMKVGVSNFRNAWESIGPDFERVDEYGLGPRESLAEAVSAVISLLGMQPCEGTEVVANNSRSHTCLLSGVFIGNVKV--LVRLQFGIDGPKEVAMKLAVRSEDDNVSDMI 734 P FV+F+ + VP + +N L+F KE+D T EY+++DL+V A D++ SNF ++S+ + E + Y L +S S V LL MQP EGTE + H LSG + KV LV++ DG + + +K+ R E D+ +++ Sbjct: 735 PVSIFVSFKFNDSVPYPLTTLTNTLQFTTKEIDIHTGEPEEEGYEDEYKIDDLDVSAGDFISPAYESNFDGLFDSL--EHEASEVYVLSLLDSFRSTCSRVAELLQMQPLEGTE-NPTDKPVHVMKLSGKLVNGEKVLALVKMAHSKDG-EGITIKVIARGESDSSVELV 900 The following BLAST results are available for this feature:
BLAST of CV712204 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712204 ID=CV712204; Name=CV712204; organism=Citrus sinensis; type=EST; length=843bpback to top |