CV712201
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712201 vs. ExPASy Swiss-Prot
Match: CSLD6_ARATH (Putative cellulose synthase-like protein D6 OS=Arabidopsis thaliana GN=CSLD6 PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 8.753e-24 Identity = 48/102 (47.06%), Postives = 73/102 (71.57%), Query Frame = -2 Query: 340 ENDLPGMDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDSTFYALIEASQFAKHWIPYCKKFYVEPRSPGAYFQSISEPHEAEEAKGFL 645 ++DLPG+D+FV TAD + E P++ NT+LS+++ DYP EKLSVY+SDD TF A+ EA+ FAK W+P+C+K +EPR+P +YF +P++ + F+ Sbjct: 200 KSDLPGIDVFVSTADAEKEPPLVTANTILSILSVDYPVEKLSVYISDDGGSLVTFEAIAEAASFAKIWVPFCRKHKIEPRNPESYFGLKRDPYKDKVRHDFV 301
BLAST of CV712201 vs. ExPASy Swiss-Prot
Match: CSLD3_ARATH (Cellulose synthase-like protein D3 OS=Arabidopsis thaliana GN=CSLD3 PE=1 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.950e-23 Identity = 47/102 (46.08%), Postives = 72/102 (70.59%), Query Frame = -2 Query: 340 ENDLPGMDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDSTFYALIEASQFAKHWIPYCKKFYVEPRSPGAYFQSISEPHEAEEAKGFL 645 ++DLPG+D+FV TADP+ E P++ NT+LS++A DYP EKL+ Y+SDD TF A+ EA+ FA W+P+C+K +EPR+P +YF +P++ + F+ Sbjct: 372 KSDLPGLDMFVSTADPEKEPPLVTSNTILSILAADYPVEKLACYVSDDGGALLTFEAMAEAASFANMWVPFCRKHNIEPRNPDSYFSLKRDPYKNKVKADFV 473
BLAST of CV712201 vs. ExPASy Swiss-Prot
Match: CSLD2_ARATH (Cellulose synthase-like protein D2 OS=Arabidopsis thaliana GN=CSLD2 PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.950e-23 Identity = 47/102 (46.08%), Postives = 71/102 (69.61%), Query Frame = -2 Query: 340 ENDLPGMDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDSTFYALIEASQFAKHWIPYCKKFYVEPRSPGAYFQSISEPHEAEEAKGFL 645 ++DLPG D+FV TADP+ E P++ NT+LS++A +YP EKLS Y+SDD TF A+ EA+ FA W+P+C+K +EPR+P +YF +P++ + F+ Sbjct: 375 KSDLPGFDVFVSTADPEKEPPLVTANTILSILAAEYPVEKLSCYVSDDGGALLTFEAMAEAASFANIWVPFCRKHAIEPRNPDSYFSLKRDPYKNKVKSDFV 476
BLAST of CV712201 vs. ExPASy Swiss-Prot
Match: CSLD5_ARATH (Cellulose synthase-like protein D5 OS=Arabidopsis thaliana GN=CSLD5 PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 7.410e-23 Identity = 46/85 (54.12%), Postives = 63/85 (74.12%), Query Frame = -2 Query: 388 NDLPGMDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDSTFYALIEASQFAKHWIPYCKKFYVEPRSPGAYF 642 +DLPG+D+FV TADP+ E P++ NT+LS++A DYP EKL+ YLSDD TF AL + + FA W+P+C+K +EPR+P AYF Sbjct: 397 SDLPGIDVFVSTADPEKEPPLVTANTILSILAVDYPVEKLACYLSDDGGALLTFEALAQTASFASTWVPFCRKHNIEPRNPEAYF 481
BLAST of CV712201 vs. ExPASy Swiss-Prot
Match: CSLD4_ARATH (Cellulose synthase-like protein D4 OS=Arabidopsis thaliana GN=CSLD4 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 9.677e-23 Identity = 48/109 (44.04%), Postives = 74/109 (67.89%), Query Frame = -2 Query: 316 NDLPGMDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDSTFYALIEASQFAKHWIPYCKKFYVEPRSPGAYFQSISEPHEAEEAKGFLAIKVQISQ 642 +DLPG+D+FV TADP+ E P++ NT+LS++A DYP EK+S YLSDD +F A+ EA+ FA W+P+C+K +EPR+P +YF +P + + F+ + +I + Sbjct: 351 SDLPGIDLFVSTADPEKEPPLVTANTILSILAVDYPVEKVSCYLSDDGGALLSFEAMAEAASFADLWVPFCRKHNIEPRNPDSYFSLKIDPTKNKSRIDFVKDRRKIKR 459
BLAST of CV712201 vs. ExPASy Swiss-Prot
Match: CSLD4_ORYSJ (Cellulose synthase-like protein D4 OS=Oryza sativa subsp. japonica GN=CSLD4 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.677e-22 Identity = 46/85 (54.12%), Postives = 63/85 (74.12%), Query Frame = -2 Query: 388 NDLPGMDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDSTFYALIEASQFAKHWIPYCKKFYVEPRSPGAYF 642 +DLPG+D+FV +ADP+ E P++ NT+LS++A DYP EKL+ YLSDD +F AL E + FA+ W+P+C+K VEPR P AYF Sbjct: 406 SDLPGIDVFVTSADPEKEPPLVTANTILSILAADYPVEKLACYLSDDGGALLSFEALAETASFARTWVPFCRKHGVEPRCPEAYF 490
BLAST of CV712201 vs. ExPASy Swiss-Prot
Match: CSLD3_ORYSJ (Cellulose synthase-like protein D3 OS=Oryza sativa subsp. japonica GN=CSLD3 PE=2 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 3.677e-22 Identity = 46/101 (45.54%), Postives = 67/101 (66.34%), Query Frame = -2 Query: 340 NDLPGMDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDSTFYALIEASQFAKHWIPYCKKFYVEPRSPGAYFQSISEPHEAEEAKGFL 642 +DLPG+D+FV TADP+ E + T+LS++A DYP EKL+ Y+SDD TF A+ EA+ FA W+P+CKK +EPR+P +YF +P + + F+ Sbjct: 376 SDLPGLDVFVSTADPEKEPVLTTATTILSILAVDYPVEKLACYVSDDGGALLTFEAMAEAASFANVWVPFCKKHDIEPRNPDSYFSVKGDPTKGKRRNDFV 476
BLAST of CV712201 vs. ExPASy Swiss-Prot
Match: CSLD5_ORYSJ (Cellulose synthase-like protein D5 OS=Oryza sativa subsp. japonica GN=CSLD5 PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 4.803e-22 Identity = 45/101 (44.55%), Postives = 69/101 (68.32%), Query Frame = -2 Query: 340 NDLPGMDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDSTFYALIEASQFAKHWIPYCKKFYVEPRSPGAYFQSISEPHEAEEAKGFL 642 +DLPG+D+F+ TADP E ++ NT+LS++A +YP EKL VY+SDD TF ++ EA FAK W+P+C+K +EPR+P +YF +P + ++ F+ Sbjct: 234 SDLPGLDVFISTADPYKEPTLVTANTLLSILATEYPVEKLFVYISDDGGALLTFESMAEACAFAKVWVPFCRKHSIEPRNPDSYFTQKGDPTKGKKRPDFV 334
BLAST of CV712201 vs. ExPASy Swiss-Prot
Match: CSLD5_ORYSI (Putative cellulose synthase-like protein D5 OS=Oryza sativa subsp. indica GN=CSLD5 PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 4.803e-22 Identity = 45/101 (44.55%), Postives = 69/101 (68.32%), Query Frame = -2 Query: 340 NDLPGMDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDSTFYALIEASQFAKHWIPYCKKFYVEPRSPGAYFQSISEPHEAEEAKGFL 642 +DLPG+D+F+ TADP E ++ NT+LS++A +YP EKL VY+SDD TF ++ EA FAK W+P+C+K +EPR+P +YF +P + ++ F+ Sbjct: 234 SDLPGLDVFISTADPYKEPTLVTANTLLSILATEYPVEKLFVYISDDGGALLTFESMAEACAFAKVWVPFCRKHSIEPRNPDSYFTQKGDPTKGKKRPDFV 334
BLAST of CV712201 vs. ExPASy Swiss-Prot
Match: CSLB4_ARATH (Cellulose synthase-like protein B4 OS=Arabidopsis thaliana GN=CSLB4 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 6.273e-22 Identity = 47/96 (48.96%), Postives = 69/96 (71.88%), Query Frame = -2 Query: 355 NDLPGMDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDSTFYALIEASQFAKHWIPYCKKFYVEPRSPGAYFQSISEPHEAEE 642 ++LP +D+FV TADP E P++V+NTVLS++A +YP KL+ Y+SDD T+++L EAS+FAK W+P+CKK+ V R+P YF++ E E E Sbjct: 90 HELPPVDMFVTTADPVREPPLIVVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIWVPFCKKYNVRVRAPFMYFRNSPEAAEGSE 185 The following BLAST results are available for this feature:
BLAST of CV712201 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712201 ID=CV712201; Name=CV712201; organism=Citrus sinensis; type=EST; length=823bpback to top |