CV712201
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712201 vs. ExPASy Swiss-Prot
Match: CSLD1_ORYSJ (Cellulose synthase-like protein D1 OS=Oryza sativa subsp. japonica GN=CSLD1 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 8.192e-22 Identity = 45/92 (48.91%), Postives = 66/92 (71.74%), Query Frame = -2 Query: 370 ENDLPGMDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDSTFYALIEASQFAKHWIPYCKKFYVEPRSPGAYFQSISEP 645 ++DLPG+DIFV TADP+ E ++ NT+LS++A DYP +KL+ Y+SDD TF A+ EA+ FA W+P+C+K +EPR+P +YF +P Sbjct: 345 KSDLPGIDIFVSTADPEKEPVLVTANTILSILAADYPVDKLACYVSDDGGALLTFEAMAEAASFANLWVPFCRKHEIEPRNPDSYFNLKRDP 436
BLAST of CV712201 vs. ExPASy Swiss-Prot
Match: CSLD1_ORYSI (Cellulose synthase-like protein D1 OS=Oryza sativa subsp. indica GN=CSLD1 PE=2 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 8.192e-22 Identity = 45/92 (48.91%), Postives = 66/92 (71.74%), Query Frame = -2 Query: 370 ENDLPGMDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDSTFYALIEASQFAKHWIPYCKKFYVEPRSPGAYFQSISEP 645 ++DLPG+DIFV TADP+ E ++ NT+LS++A DYP +KL+ Y+SDD TF A+ EA+ FA W+P+C+K +EPR+P +YF +P Sbjct: 345 KSDLPGIDIFVSTADPEKEPVLVTANTILSILAADYPVDKLACYVSDDGGALLTFEAMAEAASFANLWVPFCRKHEIEPRNPDSYFNLKRDP 436
BLAST of CV712201 vs. ExPASy Swiss-Prot
Match: CESA6_ORYSJ (Probable cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA6 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 8.192e-22 Identity = 47/86 (54.65%), Postives = 61/86 (70.93%), Query Frame = -2 Query: 385 NDLPGMDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDSTFYALIEASQFAKHWIPYCKKFYVEPRSPGAYFQ 642 + L +D FV T DP E P++ NTVLS+++ DYP EK+S Y+SDD A TF AL E S+FAK W+P+CKKF +EPR+P YFQ Sbjct: 353 SQLAPVDFFVSTVDPSKEPPLVTANTVLSILSVDYPVEKVSCYVSDDGAAMLTFEALSETSEFAKKWVPFCKKFNIEPRAPEWYFQ 438
BLAST of CV712201 vs. ExPASy Swiss-Prot
Match: CSLB2_ARATH (Cellulose synthase-like protein B2 OS=Arabidopsis thaliana GN=CSLB2 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.070e-21 Identity = 50/99 (50.51%), Postives = 69/99 (69.70%), Query Frame = -2 Query: 343 DLPGMDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDSTFYALIEASQFAKHWIPYCKKFYVEPRSPGAYFQSISEPHEAEEAKGF 639 DLP +D+FV TADP E PIMV+NTVLS++A +YP KL+ Y+SDD T+++L EAS+FAK W+P+CKK+ ++ R+P YF + P A E F Sbjct: 91 DLPSVDMFVPTADPVREPPIMVVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIWVPFCKKYNLKVRAPFRYFLN---PFAATEGSEF 186
BLAST of CV712201 vs. ExPASy Swiss-Prot
Match: CESA7_ARATH (Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Arabidopsis thaliana GN=CESA7 PE=1 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.070e-21 Identity = 49/103 (47.57%), Postives = 68/103 (66.02%), Query Frame = -2 Query: 388 KQIYIFFFICRYE-----NDLPGMDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDSTFYALIEASQFAKHWIPYCKKFYVEPRSPGAYF 681 ++ Y+ RYE N L +D+FV T DP E P++ NTVLS++A DYP EK+S Y+SDD A TF +L E ++FA+ W+P+CKKF +EPR+P YF Sbjct: 294 RETYLDRLSLRYEREGEPNMLAPVDVFVSTVDPLKEPPLVTSNTVLSILAMDYPVEKISCYVSDDGASMLTFESLSETAEFARKWVPFCKKFSIEPRAPEMYF 396
BLAST of CV712201 vs. ExPASy Swiss-Prot
Match: CESA5_ARATH (Cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Arabidopsis thaliana GN=CESA5 PE=1 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 2.384e-21 Identity = 46/103 (44.66%), Postives = 70/103 (67.96%), Query Frame = -2 Query: 388 KQIYIFFFICRYE-----NDLPGMDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDSTFYALIEASQFAKHWIPYCKKFYVEPRSPGAYF 681 ++ Y+ RYE ++L G+D+FV T DP E P++ NTVLS++A DYP ++++ Y+SDD A TF AL E ++FA+ W+P+CKK+ +EPR+P YF Sbjct: 320 RETYLDRLSLRYEKEGKPSELAGVDVFVSTVDPMKEPPLITANTVLSILAVDYPVDRVACYVSDDGAAMLTFEALSETAEFARKWVPFCKKYTIEPRAPEWYF 422
BLAST of CV712201 vs. ExPASy Swiss-Prot
Match: CESA9_ORYSJ (Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA9 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.113e-21 Identity = 47/103 (45.63%), Postives = 68/103 (66.02%), Query Frame = -2 Query: 388 KQIYIFFFICRYEND-----LPGMDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDSTFYALIEASQFAKHWIPYCKKFYVEPRSPGAYF 681 ++ Y+ RYE + L +D+FV T DP E P++ NTVLS++A DYP +K+S Y+SDD A TF +L E ++FA+ W+P+CKKF +EPR+P YF Sbjct: 323 RETYLDRLSLRYEREGEPSLLSAVDLFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGASMLTFESLSETAEFARKWVPFCKKFSIEPRAPEFYF 425
BLAST of CV712201 vs. ExPASy Swiss-Prot
Match: CESA9_ORYSI (Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA9 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.113e-21 Identity = 47/103 (45.63%), Postives = 68/103 (66.02%), Query Frame = -2 Query: 388 KQIYIFFFICRYEND-----LPGMDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDSTFYALIEASQFAKHWIPYCKKFYVEPRSPGAYF 681 ++ Y+ RYE + L +D+FV T DP E P++ NTVLS++A DYP +K+S Y+SDD A TF +L E ++FA+ W+P+CKKF +EPR+P YF Sbjct: 323 RETYLDRLSLRYEREGEPSLLSAVDLFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGASMLTFESLSETAEFARKWVPFCKKFSIEPRAPEFYF 425
BLAST of CV712201 vs. ExPASy Swiss-Prot
Match: CESA3_ORYSJ (Probable cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA3 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.113e-21 Identity = 46/86 (53.49%), Postives = 61/86 (70.93%), Query Frame = -2 Query: 385 NDLPGMDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDSTFYALIEASQFAKHWIPYCKKFYVEPRSPGAYFQ 642 + L +D FV T DP E P++ NTVLS++A DYP +K+S Y+SDD A TF AL E S+FAK W+P+CKK+ +EPR+P YFQ Sbjct: 353 SQLAPIDFFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFAKKWVPFCKKYSIEPRAPEWYFQ 438
BLAST of CV712201 vs. ExPASy Swiss-Prot
Match: CESA2_ORYSJ (Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA2 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.113e-21 Identity = 48/103 (46.60%), Postives = 68/103 (66.02%), Query Frame = -2 Query: 388 KQIYIFFFICRYEND-----LPGMDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDSTFYALIEASQFAKHWIPYCKKFYVEPRSPGAYF 681 ++ Y+ RY+ + L +DIFV T DP E P++ NTVLS++A DYP +K+S Y+SDD A TF AL E S+FA+ W+P+CKK+ +EPR+P YF Sbjct: 325 RETYLDRLALRYDREGEPSQLAPVDIFVSTVDPMKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFDALAETSEFARKWVPFCKKYSIEPRAPEWYF 427 The following BLAST results are available for this feature:
BLAST of CV712201 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712201 ID=CV712201; Name=CV712201; organism=Citrus sinensis; type=EST; length=823bpback to top |