CV712201
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712201 vs. ExPASy Swiss-Prot
Match: CESA6_ARATH (Cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Arabidopsis thaliana GN=CESA6 PE=1 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 1.545e-20 Identity = 46/103 (44.66%), Postives = 68/103 (66.02%), Query Frame = -2 Query: 388 KQIYIFFFICRYEND-----LPGMDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDSTFYALIEASQFAKHWIPYCKKFYVEPRSPGAYF 681 ++ Y+ RYE + L +D+FV T DP E P++ NTVLS++A DYP +K++ Y+SDD A TF AL E ++FA+ W+P+CKK+ +EPR+P YF Sbjct: 332 RETYLDRLSLRYEKEGKPSGLSPVDVFVSTVDPLKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETAEFARKWVPFCKKYCIEPRAPEWYF 434
BLAST of CV712201 vs. ExPASy Swiss-Prot
Match: CESA2_ARATH (Cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Arabidopsis thaliana GN=CESA2 PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.545e-20 Identity = 46/103 (44.66%), Postives = 68/103 (66.02%), Query Frame = -2 Query: 388 KQIYIFFFICRYEND-----LPGMDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDSTFYALIEASQFAKHWIPYCKKFYVEPRSPGAYF 681 ++ Y+ RYE + L +D+FV T DP E P++ NTVLS++A DYP +K++ Y+SDD A TF AL + ++FA+ W+P+CKKF +EPR+P YF Sbjct: 333 RETYLDRLSLRYEKEGKPSGLAPVDVFVSTVDPLKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSDTAEFARKWVPFCKKFNIEPRAPEWYF 435
BLAST of CV712201 vs. ExPASy Swiss-Prot
Match: CSLB6_ARATH (Cellulose synthase-like protein B6 OS=Arabidopsis thaliana GN=CSLB6 PE=2 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 2.018e-20 Identity = 45/85 (52.94%), Postives = 62/85 (72.94%), Query Frame = -2 Query: 388 NDLPGMDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDSTFYALIEASQFAKHWIPYCKKFYVEPRSPGAYF 642 +DLP +D+FV TADP E PI+V+NTVLS++A +YP KL+ Y+SDD T+++L EAS+F K W P+CKK+ V R+P YF Sbjct: 90 HDLPSVDMFVPTADPVREPPIIVVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFVKIWAPFCKKYNVRVRAPFRYF 174
BLAST of CV712201 vs. ExPASy Swiss-Prot
Match: CESA7_ORYSJ (Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA7 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.018e-20 Identity = 47/103 (45.63%), Postives = 65/103 (63.11%), Query Frame = -2 Query: 388 KQIYIFFFICRYEND-----LPGMDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDSTFYALIEASQFAKHWIPYCKKFYVEPRSPGAYF 681 ++ Y+ RYE D L +D FV T DP E PI+ NTVLS++A DYP +++S Y+SDD A F L E ++FA+ W+P+CKKF +EPR+P YF Sbjct: 269 RETYLDRLALRYERDGEPCRLAPIDFFVSTVDPLKEPPIITANTVLSILAVDYPVDRVSCYVSDDGASMLLFDTLSETAEFARRWVPFCKKFTIEPRAPEFYF 371
BLAST of CV712201 vs. ExPASy Swiss-Prot
Match: CESA1_ARATH (Cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Arabidopsis thaliana GN=CESA1 PE=1 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.018e-20 Identity = 45/103 (43.69%), Postives = 68/103 (66.02%), Query Frame = -2 Query: 388 KQIYIFFFICRYEND-----LPGMDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDSTFYALIEASQFAKHWIPYCKKFYVEPRSPGAYF 681 ++ Y+ RY+ D L +D+FV T DP E P++ NTVLS+++ DYP +K++ Y+SDD + TF +L E ++FAK W+P+CKKF +EPR+P YF Sbjct: 331 RETYLDRLAIRYDRDGEPSQLVPVDVFVSTVDPLKEPPLVTANTVLSILSVDYPVDKVACYVSDDGSAMLTFESLSETAEFAKKWVPFCKKFNIEPRAPEFYF 433
BLAST of CV712201 vs. ExPASy Swiss-Prot
Match: CESA8_ORYSJ (Probable cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA8 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.635e-20 Identity = 47/103 (45.63%), Postives = 67/103 (65.05%), Query Frame = -2 Query: 388 KQIYIFFFICRYEND-----LPGMDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDSTFYALIEASQFAKHWIPYCKKFYVEPRSPGAYF 681 ++ Y+ RY+ + L +DIFV T DP E P++ NTVLS++A DYP +K+S Y+SDD A TF AL E S+FA+ W+P+ KK+ +EPR+P YF Sbjct: 332 RETYLDRLALRYDREGEPSQLAAVDIFVSTVDPMKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFDALAETSEFARKWVPFVKKYNIEPRAPEWYF 434
BLAST of CV712201 vs. ExPASy Swiss-Prot
Match: CESA8_ARATH (Cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Arabidopsis thaliana GN=CESA8 PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.635e-20 Identity = 45/103 (43.69%), Postives = 67/103 (65.05%), Query Frame = -2 Query: 388 KQIYIFFFICRYEND-----LPGMDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDSTFYALIEASQFAKHWIPYCKKFYVEPRSPGAYF 681 ++ YI R+E + L +D FV T DP E P++ NTVLS++A DYP +K+S Y+SDD A +F +L+E + FA+ W+P+CKK+ +EPR+P YF Sbjct: 240 RETYIDRLSARFEREGEQSQLAAVDFFVSTVDPLKEPPLITANTVLSILALDYPVDKVSCYVSDDGAAMLSFESLVETADFARKWVPFCKKYSIEPRAPEFYF 342
BLAST of CV712201 vs. ExPASy Swiss-Prot
Match: CESA4_ARATH (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Arabidopsis thaliana GN=CESA4 PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.635e-20 Identity = 44/86 (51.16%), Postives = 59/86 (68.60%), Query Frame = -2 Query: 388 ENDLPGMDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDSTFYALIEASQFAKHWIPYCKKFYVEPRSPGAYF 645 +N L +D+FV T DP E PI+ NT+LS++A DYP K+S Y+SDD A F L E S+FA+ W+P+CKK+ VEPR+P YF Sbjct: 288 KNKLAPVDVFVSTVDPLKEPPIITANTILSILAVDYPVNKVSCYVSDDGASMLLFDTLSETSEFARRWVPFCKKYNVEPRAPEFYF 373
BLAST of CV712201 vs. ExPASy Swiss-Prot
Match: CESA1_ORYSJ (Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA1 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 5.871e-20 Identity = 45/103 (43.69%), Postives = 67/103 (65.05%), Query Frame = -2 Query: 388 KQIYIFFFICRYEND-----LPGMDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDSTFYALIEASQFAKHWIPYCKKFYVEPRSPGAYF 681 ++ Y+ RY+ + L +D+FV T DP E P++ NTVLS++A DYP +K+S Y+SDD + TF AL E ++FA+ W+P+CKK +EPR+P YF Sbjct: 328 RETYLDRLALRYDREGEPSQLAPIDVFVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGSAMLTFEALSETAEFARKWVPFCKKHNIEPRAPEFYF 430
BLAST of CV712201 vs. ExPASy Swiss-Prot
Match: CESA1_ORYSI (Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA1 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 5.871e-20 Identity = 45/103 (43.69%), Postives = 67/103 (65.05%), Query Frame = -2 Query: 388 KQIYIFFFICRYEND-----LPGMDIFVCTADPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDSTFYALIEASQFAKHWIPYCKKFYVEPRSPGAYF 681 ++ Y+ RY+ + L +D+FV T DP E P++ NTVLS++A DYP +K+S Y+SDD + TF AL E ++FA+ W+P+CKK +EPR+P YF Sbjct: 328 RETYLDRLALRYDREGEPSQLAPIDVFVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGSAMLTFEALSETAEFARKWVPFCKKHNIEPRAPEFYF 430 The following BLAST results are available for this feature:
BLAST of CV712201 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712201 ID=CV712201; Name=CV712201; organism=Citrus sinensis; type=EST; length=823bpback to top |